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Properties
| Property Name | Value |
|---|
| Product | ef-1 guanine nucleotide exchange domain-containing |
| Orig transcript id | gnl|cribi|Naga_100464g4.7486.mrna |
| Orig protein id | gnl|cribi|Naga_100464g4.7486 |
| Gene | EEF1Bbeta |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:611543..613058 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6836 ID=rna6836|Name=rna6836|organism=Nannochloropsis gaditana|type=mRNA|length=2387bp
AAGTGTTGCCATCATTTCTGTTCCTGATTTCTGCCAAGATGCATGCATTG
CTTTCGCTGGACAATCACTCACGTTTGGTTCACGTTGTGCGTTGCGTCGA
TTGATACCTCCGTTTTATGACATCTTGGGGGCAAATTTCTCGTTTGCTTC
TCTCCCAGACAAGGGAAGGATCGAGTTGAACCTCTTTCCCTGGCTGGTCA
CTTGTTGTCTTGTTCAGAATATTCTACTTCGTGACCGGTCACATGGATCA
AATCACACTCATGCTGGAAAACCATGCTGTTAGCCATATATAACGCGACC
TTGTATCCATTCTTGGCGGATATGGTTATATTTGGTTTGCGTGTCCTTGT
CGACCGACGCGAATCGTACGCTTGGCTCCTGCACCTCCTTCGAAGCAAGG
GTGAACATCCTTTTCTGAGCCCACTATTGCATGGACTTTTCTGTTTTTTC
TGTTTCTTATCTTGATCTCCTTGCTTTTGCGTAAGGAATGCTTTGTGCTG
ATGGTGGCGTCTTTTCATCGCGATGCGCAAATTTTGGTCTCATTACTGTT
ACTATCCGACCGTACAGATTATCACCGAGCGCTTTCTGGATGAAGTGCGT
ATTTTCGACTTCCACCTTCCTTTTAAGCTGCACACTCCTAGTCGTATCTC
CTCGCTTCAATGATGCTTTCCTCCGTGGTGAGATGTCCCCGAGGGAGCTT
GCGACGGTCGTGGACCTCCCCAGTATATCGGTCAATGTGAACGAGGATGG
AGGCGTCTCGGTGTCGACGCCCTGGGGTTCAGTAAATACGGATAGCAACG
GTACCAGCGTTCATGGTTTCACTCCCACGAGCATTGGCAATGTGACGTGT
GCGAATTTGGGTCCTTGGGATACGGCCGCGGAACCGACGTGCGAGACAGC
CTTGCCAGCTTTCTACGAGTCGACCACCACCTTCGCCGGGACTTCGAAAC
CGAAAATCCGAAAAATTACTATGGACACGTTCTGCACCACACCCTGCGGC
GACACCTGGACCCGGGCCGTTTTTGCCCACAGCTTGCGGTGTTCCCCTGG
CGTAGGAGGGAACGGCTCGGCGGCCGGAGGAGTGGTTGTCGACGTACCGG
GAGCCGCGGTATCCACAGGACCGGGCGGAAATGTGGATGTACAGGCCCCT
GGCACGACCGTGACAAGAGATCCGGGCACGGGTGCCGTCCAGGTGGAGTT
CCCGGGGGGAAGGGTGCACGCGGGGAATGGGAGCGTTGCGGTTACGTCGG
CGGCCTCCCCCGCCCAGACAGCACGCACGTCGGCCGCCACGACCTCAGGA
GGGCCCACCTTCCCCGTGGATTATCCGGGCCTGCGCCTGGGTTGCATCAA
GGACCCCAAGGACGAGGAGTTTTGCGCGGTGAAACGGGCGGCAGTGCCGG
GGGTAGGGGGAGACGCGGAGGACGGAGGCCCCGCTTGCGATTTTTATCTC
TCCTGCTGCTACGCCCAGTATGTGCAAACCTTTGGCAGCGTGCCAACTGA
ATTTGTGGAGGAGGTAGAGGCGGCTTGCCCGGGTTCGACGTTGTTTTTGC
AAGGCAGTGTCTGTACGGCGTAGGAGGGGGGAGTAAAGGGGGAATAAGGA
TACTTTGGGGGGTACGGATGCTTCAGGTAGTATGGTCTTAAGGGAGGCAA
CGGGGTGCTGTGGCCTACCGAGCACTAGAGGAAGGGACGACGGGACTTGA
AAATAAGAAAATAAGGGCGGACGATAGAAAATATGCGTCGTGTCGATATT
GCGTGTGGATACCGCCTAAGAGTGGAGACGACAGGCACGGGGCGTAGGGC
GGGAGACACGGAAGACAGTGGACAGAAAGACCGATGACAGGGAAAAATAG
GGAAAGAATAGTGTCGCATGATGGAGGCAGGAAGCGTCAGCAATCAAAAA
AATGTCACGTATCCACATGCTGCGCCGTGTGAACCTGGTCTCTTTGTGCT
GTCCAAACGCTTCCAACGGCGGACAGCTTGCAAATCTCAAATGCTTCCAC
CGATGGACAGCTTGAAAGATGTCCCTATCGTCATGCAGACTTTATCGTCA
ATGACAAGTGGAGATCAAGGTGTGCATAAGGAGAAGTTTGGGAGTCTAGA
GGCCCAGACACTGGATGAGTGAAGACGATGGTGACACCAGCTGATTTTGT
GCACATTTTTAAATCTTGAAAGAAACATTTTGATGGGAGGCAACTGGCAA
AGAGGCTTCTTTATTCCCTGTCCTCGTCCGAAAATTGACAGGGGTCTTTT
TTCATGCGTGGTCACTGTACCCCCTCCCCACTGTGTCTCTACTTATACAC
GCCCATGACCGTCTAAGAGACTCACGAGACCAAGTTTACCCGCCAAAGAG
GAGTTCAATGACGACTGTGACGATATTGAGGGCGATC back to topprotein sequence of rna6836 >rna6836-protein ID=rna6836-protein|Name=rna6836|organism=Nannochloropsis gaditana|type=polypeptide|length=189bp
MHTKTLTCSALQVSLMTYAMQYDELSVALGYALFGTAGAPAGKAAPAAKS
TKKPAAEDDDMDLFGDDEDETPKATMSRAEQVAAMKAEKEAKEKANKKRD
RSQIVLEVKPTDTDVDLDALYKTIKKEVCPPGLTWGEGYNKAPVAFGIFK
LIISLVVFDDEVSIDDVVDKIEAMEDSVQSVDINSFNKL back to topmRNA from alignment at CM002469.1:611543..613058+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6836 ID=rna6836|Name=rna6836|organism=Nannochloropsis gaditana|type=mRNA|length=1516bp|location=Sequence derived from alignment at CM002469.1:611543..613058+ (Nannochloropsis gaditana)
ATGCACGTTTGTGTCATACATACATGCAAAGCGTTCTCACCACCCAGTCA
AccttgcctccccaccccatgTAGTAGACAAAGACACTTACTTGTTCAGC
ACTCCAAGTCAGCCTAATGACCTACGCCATGCAATACGACGAGCTCTCTG
TGGCCCTTGGGTATGCTCTTTTCGGCACCGCTGGTGCTCCAGCCGGCAAG
GCAGCTCCTGCTGCGAGTAAGTGTTGCCGAAGGGCGAAAATCACGGGGTG
GGAGAGATGTGTGAGGCTCCGGAAACGCAACCACAAAGCTTTCGTCATGC
AGTGTCTGCTACGTAATTGGGCAAAAACATGTCAGGAATGTTCGGGTCCG
CCATGAAGGGCCACGACAACAATTGACGGCTGACAAATCATGGgcatttt
tctttcacacTTCTCATCTCTCCCACGCCATTCCTACACACGATTCCTGC
ATTATGTAACGTCAATATGTCATTAGAGTCCACAAAAAAACCAGCTGCGG
TACGTTTATCGGATAGTATACGTTGTGTGAATAATGAATGGCAGACTTCG
TCATGCCGTCGTAGATTCCCCCCGTTGGCCATCTTGTTCTCTTTcgtctg
ccccccccttgtcgTAGGTGCCCTTAGTGGCCGAGCCTCTTTTCGTCTCA
CATCTCATTTCCCATCGTTTTTGTCTTGTTTCGGAACGTACCACGCACGa
caggaggacgatgacatGGATCTCTTCGGGGACGATGAGGTATGGTTTCT
TATAACGGGAACACTTCTGTCCCCCTTTCATGGCCTCCCGCAGGATTCTG
TCAATTGTAAAATGATGTCTCCTCAATAGTGGTCTGTGCGTGTGACTTCG
CCGTTGGGAAGATGCCAGGAGATTTTGGGGGGTACAGCAATAGACTTTCG
TGTGCTCaattcctgcctccccggtggcgtctctttcttttcttttccca
gtTGAGACCAGCATATCCATCCTGTACAATGTCGCTATTCTGCTCTGATC
GTCTGCGTCCTcgcgcctttctcctcctatCTTTACCGGCGTGGCGGCCC
TTCTGTCATCCTGTCAACCCCACCTgttatctccctcccctcttccaacc
CTACTTGCCTGCTAACCCCGATCCCCCTCTTATGGTTCTTTTCCTAACAG
GATGAGACCCCCAAGGCAACGATGTCGCGCGCCGAGCAGGTGGCGGCCAt
gaaggcagagaaggaggccaaggagaaAGCGAACAAGAAACGGGATCGGT
CCCAGATCGTTTTGGAGGTAAAACCCACGGACACAGACGTGGACCTGGAT
GCGCTATACAAGACCATCAAGAAGGAGGTCTGCCCCCCTGGCTTGACCTG
GGGGGAGGGTTACAACAAGGCGCCCGTCGCCTTTGGAATTTTCAAGTTGA
TCATCTCCCTTGTCGTCTTCGACGACGAAGTCTCTATCGATGACGTGGTG
GACAAAATcgaggccatggaggacaGTGTGCAGTCCGTGGACATCAACTC
TTTTAACAAACTCTAA back to topCoding sequence (CDS) from alignment at CM002469.1:611543..613058+ >rna6836 ID=rna6836|Name=rna6836|organism=Nannochloropsis gaditana|type=CDS|length=2850bp|location=Sequence derived from alignment at CM002469.1:611543..613058+ (Nannochloropsis gaditana)
ATGCACACAAAGACACTTACTTGTTCAGCACTCCAAGTCAGCCTAATGAC
CTACGCCATGCAATACGACGAGCTCTCTGTGGCCCTTGGGTATGCTCTTT
TCGGCACCGCTGGTGCTCCAGCCGGCAAGGCAGCTCCTGCTGCGAAGTCC
ACAAAAAAACCAGCTGCGgaggacgatgacatGGATCTCTTCGGGGACGA
TGAGGATGAGACCCCCAAGGCAACGATGTCGCGCGCCGAGCAGGTGGCGG
CCAtgaaggcagagaaggaggccaaggagaaAGCGAACAAGAAACGGGAT
CGGTCCCAGATCGTTTTGGAGGTAAAACCCACGGACACAGACGTGGACCT
GGATGCGCTATACAAGACCATCAAGAAGGAGGTCTGCCCCCCTGGCTTGA
CCTGGGGGGAGGGTTACAACAAGGCGCCCGTCGCCTTTGGAATTTTCAAG
TTGATCATCTCCCTTGTCGTCTTCGACGACGAAGTCTCTATCGATGACGT
GGTGGACAAAATcgaggccatggaggacaGTGTGCAGTCCGTGGACATCA
ACTCTTTTAACAAACTCTAAATGCACACAAAGACACTTACTTGTTCAGCA
CTCCAAGTCAGCCTAATGACCTACGCCATGCAATACGACGAGCTCTCTGT
GGCCCTTGGGTATGCTCTTTTCGGCACCGCTGGTGCTCCAGCCGGCAAGG
CAGCTCCTGCTGCGAAGTCCACAAAAAAACCAGCTGCGgaggacgatgac
atGGATCTCTTCGGGGACGATGAGGATGAGACCCCCAAGGCAACGATGTC
GCGCGCCGAGCAGGTGGCGGCCAtgaaggcagagaaggaggccaaggaga
aAGCGAACAAGAAACGGGATCGGTCCCAGATCGTTTTGGAGGTAAAACCC
ACGGACACAGACGTGGACCTGGATGCGCTATACAAGACCATCAAGAAGGA
GGTCTGCCCCCCTGGCTTGACCTGGGGGGAGGGTTACAACAAGGCGCCCG
TCGCCTTTGGAATTTTCAAGTTGATCATCTCCCTTGTCGTCTTCGACGAC
GAAGTCTCTATCGATGACGTGGTGGACAAAATcgaggccatggaggacaG
TGTGCAGTCCGTGGACATCAACTCTTTTAACAAACTCTAAATGCACACAA
AGACACTTACTTGTTCAGCACTCCAAGTCAGCCTAATGACCTACGCCATG
CAATACGACGAGCTCTCTGTGGCCCTTGGGTATGCTCTTTTCGGCACCGC
TGGTGCTCCAGCCGGCAAGGCAGCTCCTGCTGCGAAGTCCACAAAAAAAC
CAGCTGCGgaggacgatgacatGGATCTCTTCGGGGACGATGAGGATGAG
ACCCCCAAGGCAACGATGTCGCGCGCCGAGCAGGTGGCGGCCAtgaaggc
agagaaggaggccaaggagaaAGCGAACAAGAAACGGGATCGGTCCCAGA
TCGTTTTGGAGGTAAAACCCACGGACACAGACGTGGACCTGGATGCGCTA
TACAAGACCATCAAGAAGGAGGTCTGCCCCCCTGGCTTGACCTGGGGGGA
GGGTTACAACAAGGCGCCCGTCGCCTTTGGAATTTTCAAGTTGATCATCT
CCCTTGTCGTCTTCGACGACGAAGTCTCTATCGATGACGTGGTGGACAAA
ATcgaggccatggaggacaGTGTGCAGTCCGTGGACATCAACTCTTTTAA
CAAACTCTAAATGCACACAAAGACACTTACTTGTTCAGCACTCCAAGTCA
GCCTAATGACCTACGCCATGCAATACGACGAGCTCTCTGTGGCCCTTGGG
TATGCTCTTTTCGGCACCGCTGGTGCTCCAGCCGGCAAGGCAGCTCCTGC
TGCGAAGTCCACAAAAAAACCAGCTGCGgaggacgatgacatGGATCTCT
TCGGGGACGATGAGGATGAGACCCCCAAGGCAACGATGTCGCGCGCCGAG
CAGGTGGCGGCCAtgaaggcagagaaggaggccaaggagaaAGCGAACAA
GAAACGGGATCGGTCCCAGATCGTTTTGGAGGTAAAACCCACGGACACAG
ACGTGGACCTGGATGCGCTATACAAGACCATCAAGAAGGAGGTCTGCCCC
CCTGGCTTGACCTGGGGGGAGGGTTACAACAAGGCGCCCGTCGCCTTTGG
AATTTTCAAGTTGATCATCTCCCTTGTCGTCTTCGACGACGAAGTCTCTA
TCGATGACGTGGTGGACAAAATcgaggccatggaggacaGTGTGCAGTCC
GTGGACATCAACTCTTTTAACAAACTCTAAATGCACACAAAGACACTTAC
TTGTTCAGCACTCCAAGTCAGCCTAATGACCTACGCCATGCAATACGACG
AGCTCTCTGTGGCCCTTGGGTATGCTCTTTTCGGCACCGCTGGTGCTCCA
GCCGGCAAGGCAGCTCCTGCTGCGAAGTCCACAAAAAAACCAGCTGCGga
ggacgatgacatGGATCTCTTCGGGGACGATGAGGATGAGACCCCCAAGG
CAACGATGTCGCGCGCCGAGCAGGTGGCGGCCAtgaaggcagagaaggag
gccaaggagaaAGCGAACAAGAAACGGGATCGGTCCCAGATCGTTTTGGA
GGTAAAACCCACGGACACAGACGTGGACCTGGATGCGCTATACAAGACCA
TCAAGAAGGAGGTCTGCCCCCCTGGCTTGACCTGGGGGGAGGGTTACAAC
AAGGCGCCCGTCGCCTTTGGAATTTTCAAGTTGATCATCTCCCTTGTCGT
CTTCGACGACGAAGTCTCTATCGATGACGTGGTGGACAAAATcgaggcca
tggaggacaGTGTGCAGTCCGTGGACATCAACTCTTTTAACAAACTCTAA back to top
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