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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100903g1.10563.mrna |
| Orig protein id | gnl|cribi|Naga_100903g1.10563 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:594767..596411 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6829 ID=rna6829|Name=rna6829|organism=Nannochloropsis gaditana|type=mRNA|length=1960bp
GTATACATTTTAGCACCGTAAAAGGTGTGCTTCAGGATGGGATGTGTGGC
GAAGGACACAATTTTTTGCCTTGGGCGGGTCGAATCTGACTTCCTAGAGT
ATGTTGCCCTTGCTCTCCGTCCTTTTCATCGAAAGTTCAGGTCCAGACGT
GGGAGAGAGGGAGAATTTTGGGGGGTTCAACGACCACTGCACCGCCATTT
CTGTGTCTTGAGTAGTCTCCTGTCTTCCCTTGGTTGGCTTGTACGGGGAA
ACAAGACTGTTTTTCTGATGGACAGGGTGTTAGGATGTTCCTTCGGGAAG
GTGACGTCCGTGTCACCCGTAGGCCGTCATCCCTCGCCATTCGACATTCG
TTTCCAAGCTGACAATCGCACGACGTTCCGACAGGCATGCCCACACATCC
GTCTCAAAGAAGTTTTGGGTGTTGAAAAAATTGCCTGATATGACGGACAG
CATTTCTCCCGGACGTCGGTGGGAGGTGGAGGAAAAGGTAAGGCCTGTCA
TGGAAAGATCTGTACCGAGAGAGAGCTCAGCACGATTCATGCACTCCGCC
CCTCTTTCCTGCCATCCCGTAGTTCGATGGAGCGCTGCATGGGGAGATGG
AGGACTATCAGCTCCCTGAAGTAGGGGAAGAAAATGTGACTTTGCTGGGA
TCGGAGTCGTCTCCGGCCCGCCCCGCCCTCCCATCCTTCTTCATTCCCCG
CCCTCCGACCGGCCACGCGCAACACATACAACCTTGGGAAATCGAGCAAC
GTCCCCCTGATTCCACCCACGGCAGCCACGTTCACCATGGCAAGCGCATG
TTTAATCGTCCGCGGGGCCCGAGTCCTCACACGGAGGCCAAACGTCTCTT
TCCCCTGGCCAGCACACTTCTGGAAGGTCAAGGAGCGGCCGCCGGGGGCG
GGAACGGAACACATGCCGCGGGCACCTTGGGGATCTTGCCCATTAAATCT
GGCGGTGCTTGTAGTGCCAGCCCCACCAGCAGCGACAGTAGCGTGTGCAG
CAGCCGCAGCTGCGGTGAGACCACTCCGGCCCTGGAGGGCCTCGTGAGCT
CTTCCCCCCAAAAGCGTACCCGGACCCTCACCTCCCATCACCGCCGGCGC
CGGCACGGTCGCACCTTCCTCTTCGTTTTTACCGGCCTGTCGGTCGCCAT
CATCGTCCTCCTCAGTCTTGTCGCCGTCCTCTACATTTCCCTCCACCGGC
ACGCGCGTAGCACCCGCCTGGGAAACGTGCTGGCCATTATCGAGGGGGCA
GACTACATCCCTGTCGTGAACAGCTTGCACTCGGAAAGCTCGGACTTCTC
TCGACGTGCTGGCCGGGCGCTGGTCGAGGTGGAGGGAGGGGAGGAGGACG
GGCTTGTGCGGGCAAGAGCAGGAGAGGCATTGCTACCTGCAAGAAGAGGA
CCTGCGACGGAGGGGGGGGAGCAGGGCGGGAGGGAGGAAGGGTTAGAGGA
CGGGGGAGAAGTCACAGAGGAAGGAGCGACAGAGGCAGGGTCTGTCCGTG
ATTTGGTACCTACGATGGGACACAGCCTCATCACCAGCCAGAGCGCTAGC
AAAGGCAGCGTGAAATTGGCAGCGGCGAAGGAGGAGTCAGGAGAGGAGGG
AGGGAGGGAGGAAGGGGAGGGCGGAAAGCGAGGAGGACGAGGGGAGGAGT
CAGAGGGGGCAGATGAGGGAGATATTCTGGACGAAGAAGTGGAGTTTCGC
ATGGGAAAACGCCGTTCGTTCCACCCGCTGCCCCCCCCCGGCAAAAATGT
GTAGTGCCACGTACAAGATGAATTTGTCGGAGGAGCAGGCCCAGGTGAGA
AAGGGAGGGAGGGAGTGAGGGAGAGAGGGAGGGAGGATGTGTCTGTCTTG
TGGTGTGAGGGTAGGAAAGGAACGAGGCAGGTCTCATGCCGCGGGCGGTG
GACTTCCGTGGCGGCGTATGTGACGATCCTCGTCTCATTCCTTCCTTACC
TCCCTCCCTC back to topprotein sequence of rna6829 >rna6829-protein ID=rna6829-protein|Name=rna6829|organism=Nannochloropsis gaditana|type=polypeptide|length=196bp
MVRLCNCGCAQDGETDPPAPSFSSRPHPIAPPPPPRVDSLTLMSEILRGA
HVVIENDRGAFYSWFVRMQDSYRRTSSHLSTVPMYGIDQGSVLRTILTGR
REGRRERGVRVLFFVTGHLMLSSARHLCCCYFVARKRLASSLLMPGQTAL
TRYSPTHPSLTCAPRFPSRPPYRTDGGRRHLDAVRRRRVGPVPASL back to topmRNA from alignment at CM002469.1:594767..596411+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6829 ID=rna6829|Name=rna6829|organism=Nannochloropsis gaditana|type=mRNA|length=1645bp|location=Sequence derived from alignment at CM002469.1:594767..596411+ (Nannochloropsis gaditana)
ctcctcgctccctctagCTCATCGACCTGGACAACTTCGACCAAGAGCTC
CTGGGGACCATCATGGTCCGTCTCTGCAACTGCGGCTGCGCTCAGGACGG
GGAGACCGACCCCCCTgccccgtccttctcctcgcgtCCCCACCCcatcg
ccccccctccccctccccgcgtcGACTCCCTGACCCTCATGAGTGAGATC
CTCCGGGGGGCGCACGTGGTCATCGAGAACGACAGAGGGGCCTTCTATTC
CTGGTTCGTGCGGATGCAGGACTCCTACCGACGCACTTCGTCGCACCTCT
CCACCGTGCCCATGTATGGGATCGACCAAGGCTCCGTGCTGAGGACGATT
TTGacgggtaggagggagggaaggagagaaagaggagtcAGAGTTCTGTT
CTTCGTGACGGGCCACCTTATGCTTTCCTCTGCGCGCCACCTGTGTTGCT
GTTATTTCGTTGCACGGAAACGACTCGCCTCCAGTCTCCTAATGCCTGGT
CAGACCGCTCTTACTCGGTATTCACCTAcacacccctccctcacctgcgc
cccacgctttccctcccgccctccctacaGGACGGACGGGGGACGGCGAC
ACTTGGATGCAGTTCGAAGGCGCCGGGTGGGACCCGTTCCGGCGTCCCTT
TGAGTCCTTCCTGCACGCCCTGAATTTCGTCCAGTACCGCATCACGGGAC
GGCAGGTCGGGCCCTTGGGAACTAGCGCGTTCACGGACCAACGTCCCGTG
CAATTGCATTTTGACGGTTGTACCAGCGACGGACCGGATATCTTGGGCCG
GCTCTTTCGTCAGCTGGACGCGGAGGACCCTGCGGGGAAGGGACCGATCC
CGACCTTGGCTGGGCTCGTGGATCGAGTGGGCAGGCAAGGGCGTCACTTG
ATGGCGTCCctcgcgccattttcccctGTCTCTACGTTCCGGTGGACGTT
GCGGGAGACCGACGTGGCATCCACAGGGCTTGGTGgagcggcgggggggg
ggcagtggagggaggggaaggggagggggagacagGAATCTGCGGAGAGT
AAATCGTCACTTCTCGTACGAGTGAATTTGGGGCGGTTATTTTGGGAAAC
CGCttaggggggagggggcttgAGAGTCGTTGCCGTGTGTGCCATGGTAG
TGTATAATTGGATTCTGTGCTTTGTCTCGGGCCTGCTTGATATATATACG
TAAGACATGTACAGAGTTAGGGGACGCTCTTTCAGAAAGAAGTGCGGGAA
TCCAGggtaggagggcgggaaaggaggggtcgAGCCGGGAGCGGACTGCA
GGGTGCCACAAATTTtgaggagtgggaggggggagggtggcggtcGAATA
GCGGGGGATGGCCTCGGTACCACAGGTCGGGCGGCCTcgggtggggaagg
gcgcCCGTCGGGACGGGGAActcggaggaggccaggggggagCCCGTGAG
TGTCTTGTACGTGGGTGGCGTCCGAGAGCACGGGAGTGTAGGAGTGgggt
agggaaagaggagtcaGCTGCGGTATCCTAGAGACTGCCTGCATTCGTTG
TGCATCGCTTTGCCGACGATTAGCCCGCGAAACACTTATTATCGGCGGGA
ATCAGAAACAAAGAATTTGAGCGAGAAGCTTTTCTATCTATACCA back to topCoding sequence (CDS) from alignment at CM002469.1:594767..596411+ >rna6829 ID=rna6829|Name=rna6829|organism=Nannochloropsis gaditana|type=CDS|length=591bp|location=Sequence derived from alignment at CM002469.1:594767..596411+ (Nannochloropsis gaditana)
ATGGTCCGTCTCTGCAACTGCGGCTGCGCTCAGGACGGGGAGACCGACCC
CCCTgccccgtccttctcctcgcgtCCCCACCCcatcgccccccctcccc
ctccccgcgtcGACTCCCTGACCCTCATGAGTGAGATCCTCCGGGGGGCG
CACGTGGTCATCGAGAACGACAGAGGGGCCTTCTATTCCTGGTTCGTGCG
GATGCAGGACTCCTACCGACGCACTTCGTCGCACCTCTCCACCGTGCCCA
TGTATGGGATCGACCAAGGCTCCGTGCTGAGGACGATTTTGacgggtagg
agggagggaaggagagaaagaggagtcAGAGTTCTGTTCTTCGTGACGGG
CCACCTTATGCTTTCCTCTGCGCGCCACCTGTGTTGCTGTTATTTCGTTG
CACGGAAACGACTCGCCTCCAGTCTCCTAATGCCTGGTCAGACCGCTCTT
ACTCGGTATTCACCTAcacacccctccctcacctgcgccccacgctttcc
ctcccgccctccctacaGGACGGACGGGGGACGGCGACACTTGGATGCAG
TTCGAAGGCGCCGGGTGGGACCCGTTCCGGCGTCCCTTTGA back to top
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