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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF155 |
| Orig transcript id | gnl|cribi|Naga_100202g3.196.mrna |
| Orig protein id | gnl|cribi|Naga_100202g3.196 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:589856..592115 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6826 ID=rna6826|Name=rna6826|organism=Nannochloropsis gaditana|type=mRNA|length=1626bp
CCTTTGTCCCGATACGACATAAAATCCCACGCCGAGGCACGCATGTTCTT
GTTCTTTCCACTCTCGGGGCAGATGTGTACTTTTTTAAAGCGTGGCCGTT
TCGCTTTGTGAATGCGTATCTTTTTTTTTAACAAGCTTCCTCTCTACGAC
CGATCCCCACAGGAAAACCTGGGAGGGAGGGACGCAGCCAAATACTCTCC
TAGTACAGTCAAAATATTGCACGCCATGGCTTCTCACGCAGAAGAGGACG
CCGTCGAGCGCACCCTCTGCCAGATCCGATCAGTGCATGTGTTCAAGATC
CCCCCTCGAACGAGCGCAGGAGGGTACCGAGCCTCTGACTGGAAAGACGA
GGTGTGGCAAGGTGCTGTTAAGATTGTTCAAAAAGGACTGGACGCTGCGA
TCGTTCTAACGGATCCCAAGACTGGCTCTCTCTTTGCCATGTCGCCTATC
AAAGAGGGTTCCGTGGAACGTTGCGTAGATTCGAGCCGTTACTTTGTTCT
GAAGGTTCAAAACGCTGCGGGCAAGCATGCCTTCATCGGTGTCGCCTTCG
ATGAACGGGAGCAAGCCTTCGATTTCAACGTGGCGATCCAGGAGTACGAG
AAAGACAAAGAGCGGGAAGAGCGGCTGAGGACAGGCGTGGGCGCGGGCGG
AGTGGATTCCATGGGAGCTGGCATCCCAAAGCGGGACTTAAGCCTGAAGG
AGGGCGAAAAAATCTCGATCAAGCTACCGACACGCCAAGGCGGGGAGCGG
AGGCCACGCGGAATCGGGAAAGAGTCCAGCGGGAACGGAGTGCTACCGCC
CCCTCCAGGGTCTTGTCGGGGGGGAGGAGGGTTGCTGGCACCACCACCCT
CGACGGGTTCCGGGGGGGGGAAAGTGTATGGAGGGGCTGCGGCACATGAC
GATTTTTTCCGCGGCACGGGGAGCCTAGCGGCGGGCCCGCCCCCTCGGAA
AGAGGACGGCACCGAGTCCTCCGGGCCGCTGCCATCCGTTTCCGCCCATC
GGTCTCCTGCTACGCCCGCGCCGTCGGGTTTCCCCGATGACTTTGGAGGC
TTTGTGGCTCCCAGTAACCCGCCTTCCTCCTCCCCCTCCCCCGCCGCAAC
CCGCTTTCCCACCGCCTTTCCTATTCCTCGCGCCCCGGTCTCGGGCCACG
GCGCGGGGAAGTCCTGCCCCTTCGACGGTCTCAGTGCCCTGGGTGACGAC
TTGGCCTCTCAATCGGCCCCGTGGGGCGCCAAGAGTAACACTTCCAACAG
CGATCCTTTCGCGGACCTGCTGCCGTTCAAGTAAGGGAGGGGTTTTCAAC
CGGCGAGCGGCAAAGAAGAGAAAGCTAGCGGCAGTACACGACCGCGACAT
GCCGGAGGCTGGCGGCGGTCTTGACATCCTGTGTGTCATTAATGTGAATG
CTTTGTTTATTTAGGTTATGGTGCTGTATGTTGTGTTGCCAAGGAAGGCG
ATGGAATTGAAAAGCTTGGGAAAAGACCGTGTCTCTCGCGTCACGAGTTA
GGGATGAGCGCATGCTGTACAAGAATGTGGAAGAACGTAAATACACGACA
AAGGTAGCGCTGACATTGTCTATCATGTGAAATATGTCCCTTCTATTTAA
TTCTTTGGAGGGGTCCTAGTATTTGT back to topprotein sequence of rna6826 >rna6826-protein ID=rna6826-protein|Name=rna6826|organism=Nannochloropsis gaditana|type=polypeptide|length=461bp
MLLSTGRQFTQWVGVVSSSTVSILRGSKRSLGSFTTPLASMRPGPHAVDG
RRPHGNTSKTSLTPTRGWRRGVSREPACLYMGWNHFWVRFTPHNRGRFAS
LSSQASPQSNLKQSKTGMGISRRGTPPSSPLAASKPSTGSLEVDGEVDSL
TTDPPPSLPPSLPAPLPVIEPSGGRVSVMAFYVGQNLDLVSVVQANFLSQ
QGYKMSDDLLLVPLEDKGERKHSSQEGTVWKNVQSALVVFKHGSVVFFNV
PDGEQAKYLHSLSRHCGEVVPQSHRFRETLECWVRPWQEKYHVMGQDVVQ
LRELNEDSIKVLADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFT
EMDKKDLFKLVALNNKILTDAMSSGLLEQSKPAWNFNRLDALWNDLRDEF
SIGERFGKVEHKISHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLS
CIDLYHQILVQ back to topmRNA from alignment at CM002469.1:589856..592115+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6826 ID=rna6826|Name=rna6826|organism=Nannochloropsis gaditana|type=mRNA|length=2260bp|location=Sequence derived from alignment at CM002469.1:589856..592115+ (Nannochloropsis gaditana)
TCAATTGCAAGGTTCTTGTGGAAAGTTCTGTTGCATGGTTAACCCGCATT
GCATGGGAAGCAACGAGGTGCCGTCTTCTATCATCGTTGTTTGGCTTCTG
GAAGACTCACTAGCATCACTCTCCTTCCAGTAGGTTTTCCCGATATAGGA
TGCTTTTGTCGACAGGACGGCAGTTTACACAATGGGTCGGGGTTGTCTCG
AGCTCGACTGTCAGTATATTGAGGGGAAGCAAGCGCAGCTTGGGTAGCTT
CACGACGCCTTTGGCCTCCATGCGGCCTGGGCCACATGCCGTGGATGGGC
GTAGGCCTCACGGCAACACGAGCAAGACAAGCCTTACACCTACccgagga
tggaggaggggtgtaTCACGAGAGCCTGCGTGCCTCTACATGGGCTGGAA
TCATTTTTGGGTGCGTTTCACACCACATAACAGAGGCAGatttgcctccc
tttccagccAAGCTAGGTAGGTAGGTGCTTGGGAGAATGATGTGCATGAC
CAGGTTTGTTCCTTCTCAATCATGAAAGACCATGACATCGTCcttgtctt
ctcctttttaATTTCATGCTGCCATTGGAAAACGATGTTGGGAAATTTGT
GGAAGGAACAACAGCCTCGGAGGCTACATATCTAAGCCATTATCCCTATC
CCTCTTGTCGCGCACATTCAAATCAGCCCACAGTCAAATCTGAAGCAATC
CAAAACCGGAATGGGCATATCCCGACGCGGTaccccaccctcttctcccc
tagCTGCATCTAAGCCCTCCACCGGCAGCCTGGAAGTCGACGGGGAAGTC
GACAGCCTGACGACGgatccgcctccctccctccctccctccctccctgc
ccctttgcCCGTCATCGAGCCCAGTGGTGGGCGCGTTAGTGTCATGGCTT
TCTACGTAGGCCAGAATTTGGACTTGGTTTCGGTCGTGCAAGCCAATTTT
CTCTCCCAGCAAGGCTATAAGATGAGTGACGATCTACTGCTGGTCCCctt
ggaggacaagggggaaagaaagcacaGTTCCCAGGAAGGGACGGTATGGA
AGAACGTCCAGAGCGCCTTGGTTGTCTTCAAGCACGGCTCGGTCGTGTTC
TTCAACGTGCCGGACGGGGAGCAGGCCAAGTACTTGCACTCCTTGTCCCG
GCACTGTGGGGAGGTTGTGCCTCAGTCGCACCGTTTCCGGGAGACGCTCG
AGTGCTGGGTGCGCCCGTGGCAGGAGAAATACCACGTGATGGGCCAGGAT
GTGGTGCAGTTGCGTGAACTCAACGAGGACTCGATCAAGGTGCTGGCGGA
CGTAATAGGGCATTCCGTGGCGCTGAACTTCTACAACAAGAAAGCGGATA
GGATGCTGGAGGACTTCCGGGTATTGAACAACAGCGTGGAGGGCTCGGGC
GTCTTCACGGAGATGGACAAAAAGGATCTGTTCAAGCTGGtaatgggagg
aggcggggaatcAGGACGgggtagagggagaggaaggagaggaagggagt
acTTATGGACGTGAGGAATGTAATCAGGGGCATGGTGCTTTTCTCCGCTT
TtgttcttccctttccctcatgGCGCCCTCTCTTTTTATTCTTTTCCCTG
CAGGTGGCGTTGAACAACAAAATTTTGACCGACGCCATGTCCTCCGGGCT
TCTAGAACAATCGAAGCCGGCCTGGAACTTCAACCGGCTGGACGCGCTTT
GGAACGACCTCAGGGATGAGTTCAGCATCGGGGAGCGGTACGTGGGTGCT
CGCACATCAGTGGCGAAATCTCTTTGTTTTGATGCAAAAGCGTCTCAAGT
GGAGTACGGATTCTTCGTCACCCGTgtgcttccgtccctccctgcaggtT
TGGCAAAGTCGAACACAAAATCTCGCACGTGCAAAGCAACACGAAGTTTT
TCCTGGAGGTCCTCAATCACCAGAAAAGCAACAAATTGGAATGGATCATC
ATTGTGCTGATTGCGGCGGAAATAGTTCTGTCTTGTATAGACCTGTACCA
TCAGATTTTGGTCCAGTAAGAGGTGGTGCAATAGATTGGAAAAAAGAGAG
CGCGCAGGAAATGCGCCGCAAGATCATCGAATTCACTGCATTAAATGCAT
CATTCTTTTTGTGGGAAAGGGTTTGCCTAATTACAAGTCAACGTCTTAAA
GAAAATGTACAGTGCGAGCACGTTTTGTGTCTGACATCCGCTTGGTGACT
TATTCTTTGTAGGGCAGGACCGAGTTGTGAGTGTTGACAAATCAAACGAT
AAACCCCACA back to topCoding sequence (CDS) from alignment at CM002469.1:589856..592115+ >rna6826 ID=rna6826|Name=rna6826|organism=Nannochloropsis gaditana|type=CDS|length=5544bp|location=Sequence derived from alignment at CM002469.1:589856..592115+ (Nannochloropsis gaditana)
ATGCTTTTGTCGACAGGACGGCAGTTTACACAATGGGTCGGGGTTGTCTC
GAGCTCGACTGTCAGTATATTGAGGGGAAGCAAGCGCAGCTTGGGTAGCT
TCACGACGCCTTTGGCCTCCATGCGGCCTGGGCCACATGCCGTGGATGGG
CGTAGGCCTCACGGCAACACGAGCAAGACAAGCCTTACACCTACccgagg
atggaggaggggtgtaTCACGAGAGCCTGCGTGCCTCTACATGGGCTGGA
ATCATTTTTGGGTGCGTTTCACACCACATAACAGAGGCAGatttgcctcc
ctttccagccAAGCTAGCCCACAGTCAAATCTGAAGCAATCCAAAACCGG
AATGGGCATATCCCGACGCGGTaccccaccctcttctcccctagCTGCAT
CTAAGCCCTCCACCGGCAGCCTGGAAGTCGACGGGGAAGTCGACAGCCTG
ACGACGgatccgcctccctccctccctccctccctccctgcccctttgcC
CGTCATCGAGCCCAGTGGTGGGCGCGTTAGTGTCATGGCTTTCTACGTAG
GCCAGAATTTGGACTTGGTTTCGGTCGTGCAAGCCAATTTTCTCTCCCAG
CAAGGCTATAAGATGAGTGACGATCTACTGCTGGTCCCcttggaggacaa
gggggaaagaaagcacaGTTCCCAGGAAGGGACGGTATGGAAGAACGTCC
AGAGCGCCTTGGTTGTCTTCAAGCACGGCTCGGTCGTGTTCTTCAACGTG
CCGGACGGGGAGCAGGCCAAGTACTTGCACTCCTTGTCCCGGCACTGTGG
GGAGGTTGTGCCTCAGTCGCACCGTTTCCGGGAGACGCTCGAGTGCTGGG
TGCGCCCGTGGCAGGAGAAATACCACGTGATGGGCCAGGATGTGGTGCAG
TTGCGTGAACTCAACGAGGACTCGATCAAGGTGCTGGCGGACGTAATAGG
GCATTCCGTGGCGCTGAACTTCTACAACAAGAAAGCGGATAGGATGCTGG
AGGACTTCCGGGTATTGAACAACAGCGTGGAGGGCTCGGGCGTCTTCACG
GAGATGGACAAAAAGGATCTGTTCAAGCTGGTGGCGTTGAACAACAAAAT
TTTGACCGACGCCATGTCCTCCGGGCTTCTAGAACAATCGAAGCCGGCCT
GGAACTTCAACCGGCTGGACGCGCTTTGGAACGACCTCAGGGATGAGTTC
AGCATCGGGGAGCGgtTTGGCAAAGTCGAACACAAAATCTCGCACGTGCA
AAGCAACACGAAGTTTTTCCTGGAGGTCCTCAATCACCAGAAAAGCAACA
AATTGGAATGGATCATCATTGTGCTGATTGCGGCGGAAATAGTTCTGTCT
TGTATAGACCTGTACCATCAGATTTTGGTCCAGTAAATGCTTTTGTCGAC
AGGACGGCAGTTTACACAATGGGTCGGGGTTGTCTCGAGCTCGACTGTCA
GTATATTGAGGGGAAGCAAGCGCAGCTTGGGTAGCTTCACGACGCCTTTG
GCCTCCATGCGGCCTGGGCCACATGCCGTGGATGGGCGTAGGCCTCACGG
CAACACGAGCAAGACAAGCCTTACACCTACccgaggatggaggaggggtg
taTCACGAGAGCCTGCGTGCCTCTACATGGGCTGGAATCATTTTTGGGTG
CGTTTCACACCACATAACAGAGGCAGatttgcctccctttccagccAAGC
TAGCCCACAGTCAAATCTGAAGCAATCCAAAACCGGAATGGGCATATCCC
GACGCGGTaccccaccctcttctcccctagCTGCATCTAAGCCCTCCACC
GGCAGCCTGGAAGTCGACGGGGAAGTCGACAGCCTGACGACGgatccgcc
tccctccctccctccctccctccctgcccctttgcCCGTCATCGAGCCCA
GTGGTGGGCGCGTTAGTGTCATGGCTTTCTACGTAGGCCAGAATTTGGAC
TTGGTTTCGGTCGTGCAAGCCAATTTTCTCTCCCAGCAAGGCTATAAGAT
GAGTGACGATCTACTGCTGGTCCCcttggaggacaagggggaaagaaagc
acaGTTCCCAGGAAGGGACGGTATGGAAGAACGTCCAGAGCGCCTTGGTT
GTCTTCAAGCACGGCTCGGTCGTGTTCTTCAACGTGCCGGACGGGGAGCA
GGCCAAGTACTTGCACTCCTTGTCCCGGCACTGTGGGGAGGTTGTGCCTC
AGTCGCACCGTTTCCGGGAGACGCTCGAGTGCTGGGTGCGCCCGTGGCAG
GAGAAATACCACGTGATGGGCCAGGATGTGGTGCAGTTGCGTGAACTCAA
CGAGGACTCGATCAAGGTGCTGGCGGACGTAATAGGGCATTCCGTGGCGC
TGAACTTCTACAACAAGAAAGCGGATAGGATGCTGGAGGACTTCCGGGTA
TTGAACAACAGCGTGGAGGGCTCGGGCGTCTTCACGGAGATGGACAAAAA
GGATCTGTTCAAGCTGGTGGCGTTGAACAACAAAATTTTGACCGACGCCA
TGTCCTCCGGGCTTCTAGAACAATCGAAGCCGGCCTGGAACTTCAACCGG
CTGGACGCGCTTTGGAACGACCTCAGGGATGAGTTCAGCATCGGGGAGCG
gtTTGGCAAAGTCGAACACAAAATCTCGCACGTGCAAAGCAACACGAAGT
TTTTCCTGGAGGTCCTCAATCACCAGAAAAGCAACAAATTGGAATGGATC
ATCATTGTGCTGATTGCGGCGGAAATAGTTCTGTCTTGTATAGACCTGTA
CCATCAGATTTTGGTCCAGTAAATGCTTTTGTCGACAGGACGGCAGTTTA
CACAATGGGTCGGGGTTGTCTCGAGCTCGACTGTCAGTATATTGAGGGGA
AGCAAGCGCAGCTTGGGTAGCTTCACGACGCCTTTGGCCTCCATGCGGCC
TGGGCCACATGCCGTGGATGGGCGTAGGCCTCACGGCAACACGAGCAAGA
CAAGCCTTACACCTACccgaggatggaggaggggtgtaTCACGAGAGCCT
GCGTGCCTCTACATGGGCTGGAATCATTTTTGGGTGCGTTTCACACCACA
TAACAGAGGCAGatttgcctccctttccagccAAGCTAGCCCACAGTCAA
ATCTGAAGCAATCCAAAACCGGAATGGGCATATCCCGACGCGGTacccca
ccctcttctcccctagCTGCATCTAAGCCCTCCACCGGCAGCCTGGAAGT
CGACGGGGAAGTCGACAGCCTGACGACGgatccgcctccctccctccctc
cctccctccctgcccctttgcCCGTCATCGAGCCCAGTGGTGGGCGCGTT
AGTGTCATGGCTTTCTACGTAGGCCAGAATTTGGACTTGGTTTCGGTCGT
GCAAGCCAATTTTCTCTCCCAGCAAGGCTATAAGATGAGTGACGATCTAC
TGCTGGTCCCcttggaggacaagggggaaagaaagcacaGTTCCCAGGAA
GGGACGGTATGGAAGAACGTCCAGAGCGCCTTGGTTGTCTTCAAGCACGG
CTCGGTCGTGTTCTTCAACGTGCCGGACGGGGAGCAGGCCAAGTACTTGC
ACTCCTTGTCCCGGCACTGTGGGGAGGTTGTGCCTCAGTCGCACCGTTTC
CGGGAGACGCTCGAGTGCTGGGTGCGCCCGTGGCAGGAGAAATACCACGT
GATGGGCCAGGATGTGGTGCAGTTGCGTGAACTCAACGAGGACTCGATCA
AGGTGCTGGCGGACGTAATAGGGCATTCCGTGGCGCTGAACTTCTACAAC
AAGAAAGCGGATAGGATGCTGGAGGACTTCCGGGTATTGAACAACAGCGT
GGAGGGCTCGGGCGTCTTCACGGAGATGGACAAAAAGGATCTGTTCAAGC
TGGTGGCGTTGAACAACAAAATTTTGACCGACGCCATGTCCTCCGGGCTT
CTAGAACAATCGAAGCCGGCCTGGAACTTCAACCGGCTGGACGCGCTTTG
GAACGACCTCAGGGATGAGTTCAGCATCGGGGAGCGgtTTGGCAAAGTCG
AACACAAAATCTCGCACGTGCAAAGCAACACGAAGTTTTTCCTGGAGGTC
CTCAATCACCAGAAAAGCAACAAATTGGAATGGATCATCATTGTGCTGAT
TGCGGCGGAAATAGTTCTGTCTTGTATAGACCTGTACCATCAGATTTTGG
TCCAGTAAATGCTTTTGTCGACAGGACGGCAGTTTACACAATGGGTCGGG
GTTGTCTCGAGCTCGACTGTCAGTATATTGAGGGGAAGCAAGCGCAGCTT
GGGTAGCTTCACGACGCCTTTGGCCTCCATGCGGCCTGGGCCACATGCCG
TGGATGGGCGTAGGCCTCACGGCAACACGAGCAAGACAAGCCTTACACCT
ACccgaggatggaggaggggtgtaTCACGAGAGCCTGCGTGCCTCTACAT
GGGCTGGAATCATTTTTGGGTGCGTTTCACACCACATAACAGAGGCAGat
ttgcctccctttccagccAAGCTAGCCCACAGTCAAATCTGAAGCAATCC
AAAACCGGAATGGGCATATCCCGACGCGGTaccccaccctcttctcccct
agCTGCATCTAAGCCCTCCACCGGCAGCCTGGAAGTCGACGGGGAAGTCG
ACAGCCTGACGACGgatccgcctccctccctccctccctccctccctgcc
cctttgcCCGTCATCGAGCCCAGTGGTGGGCGCGTTAGTGTCATGGCTTT
CTACGTAGGCCAGAATTTGGACTTGGTTTCGGTCGTGCAAGCCAATTTTC
TCTCCCAGCAAGGCTATAAGATGAGTGACGATCTACTGCTGGTCCCcttg
gaggacaagggggaaagaaagcacaGTTCCCAGGAAGGGACGGTATGGAA
GAACGTCCAGAGCGCCTTGGTTGTCTTCAAGCACGGCTCGGTCGTGTTCT
TCAACGTGCCGGACGGGGAGCAGGCCAAGTACTTGCACTCCTTGTCCCGG
CACTGTGGGGAGGTTGTGCCTCAGTCGCACCGTTTCCGGGAGACGCTCGA
GTGCTGGGTGCGCCCGTGGCAGGAGAAATACCACGTGATGGGCCAGGATG
TGGTGCAGTTGCGTGAACTCAACGAGGACTCGATCAAGGTGCTGGCGGAC
GTAATAGGGCATTCCGTGGCGCTGAACTTCTACAACAAGAAAGCGGATAG
GATGCTGGAGGACTTCCGGGTATTGAACAACAGCGTGGAGGGCTCGGGCG
TCTTCACGGAGATGGACAAAAAGGATCTGTTCAAGCTGGTGGCGTTGAAC
AACAAAATTTTGACCGACGCCATGTCCTCCGGGCTTCTAGAACAATCGAA
GCCGGCCTGGAACTTCAACCGGCTGGACGCGCTTTGGAACGACCTCAGGG
ATGAGTTCAGCATCGGGGAGCGgtTTGGCAAAGTCGAACACAAAATCTCG
CACGTGCAAAGCAACACGAAGTTTTTCCTGGAGGTCCTCAATCACCAGAA
AAGCAACAAATTGGAATGGATCATCATTGTGCTGATTGCGGCGGAAATAG
TTCTGTCTTGTATAGACCTGTACCATCAGATTTTGGTCCAGTAA back to top
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