EWM23871.1, cds6810 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23871.1 vs. NCBI_GenBank
Match: gi|585105147|gb|EWM23871.1| (Protein of unknown function DUF155 [Nannochloropsis gaditana]) HSP 1 Score: 950.658 bits (2456), Expect = 0.000e+0 Identity = 461/461 (100.00%), Postives = 461/461 (100.00%), Query Frame = 0
Query: 1 MLLSTGRQFTQWVGVVSSSTVSILRGSKRSLGSFTTPLASMRPGPHAVDGRRPHGNTSKTSLTPTRGWRRGVSREPACLYMGWNHFWVRFTPHNRGRFASLSSQASPQSNLKQSKTGMGISRRGTPPSSPLAASKPSTGSLEVDGEVDSLTTDPPPSLPPSLPAPLPVIEPSGGRVSVMAFYVGQNLDLVSVVQANFLSQQGYKMSDDLLLVPLEDKGERKHSSQEGTVWKNVQSALVVFKHGSVVFFNVPDGEQAKYLHSLSRHCGEVVPQSHRFRETLECWVRPWQEKYHVMGQDVVQLRELNEDSIKVLADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDAMSSGLLEQSKPAWNFNRLDALWNDLRDEFSIGERFGKVEHKISHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYHQILVQ 461
MLLSTGRQFTQWVGVVSSSTVSILRGSKRSLGSFTTPLASMRPGPHAVDGRRPHGNTSKTSLTPTRGWRRGVSREPACLYMGWNHFWVRFTPHNRGRFASLSSQASPQSNLKQSKTGMGISRRGTPPSSPLAASKPSTGSLEVDGEVDSLTTDPPPSLPPSLPAPLPVIEPSGGRVSVMAFYVGQNLDLVSVVQANFLSQQGYKMSDDLLLVPLEDKGERKHSSQEGTVWKNVQSALVVFKHGSVVFFNVPDGEQAKYLHSLSRHCGEVVPQSHRFRETLECWVRPWQEKYHVMGQDVVQLRELNEDSIKVLADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDAMSSGLLEQSKPAWNFNRLDALWNDLRDEFSIGERFGKVEHKISHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYHQILVQ
Sbjct: 1 MLLSTGRQFTQWVGVVSSSTVSILRGSKRSLGSFTTPLASMRPGPHAVDGRRPHGNTSKTSLTPTRGWRRGVSREPACLYMGWNHFWVRFTPHNRGRFASLSSQASPQSNLKQSKTGMGISRRGTPPSSPLAASKPSTGSLEVDGEVDSLTTDPPPSLPPSLPAPLPVIEPSGGRVSVMAFYVGQNLDLVSVVQANFLSQQGYKMSDDLLLVPLEDKGERKHSSQEGTVWKNVQSALVVFKHGSVVFFNVPDGEQAKYLHSLSRHCGEVVPQSHRFRETLECWVRPWQEKYHVMGQDVVQLRELNEDSIKVLADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDAMSSGLLEQSKPAWNFNRLDALWNDLRDEFSIGERFGKVEHKISHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYHQILVQ 461
BLAST of EWM23871.1 vs. NCBI_GenBank
Match: gi|553183329|ref|XP_005853877.1| (hypothetical protein NGA_0437300 [Nannochloropsis gaditana CCMP526] >gi|422295185|gb|EKU22484.1| hypothetical protein NGA_0437300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 705.286 bits (1819), Expect = 0.000e+0 Identity = 343/344 (99.71%), Postives = 343/344 (99.71%), Query Frame = 0
Query: 118 MGISRRGTPPSSPLAASKPSTGSLEVDGEVDSLTTDPPPSLPPSLPAPLPVIEPSGGRVSVMAFYVGQNLDLVSVVQANFLSQQGYKMSDDLLLVPLEDKGERKHSSQEGTVWKNVQSALVVFKHGSVVFFNVPDGEQAKYLHSLSRHCGEVVPQSHRFRETLECWVRPWQEKYHVMGQDVVQLRELNEDSIKVLADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDAMSSGLLEQSKPAWNFNRLDALWNDLRDEFSIGERFGKVEHKISHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYHQILVQ 461
MGISRRG PPSSPLAASKPSTGSLEVDGEVDSLTTDPPPSLPPSLPAPLPVIEPSGGRVSVMAFYVGQNLDLVSVVQANFLSQQGYKMSDDLLLVPLEDKGERKHSSQEGTVWKNVQSALVVFKHGSVVFFNVPDGEQAKYLHSLSRHCGEVVPQSHRFRETLECWVRPWQEKYHVMGQDVVQLRELNEDSIKVLADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDAMSSGLLEQSKPAWNFNRLDALWNDLRDEFSIGERFGKVEHKISHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYHQILVQ
Sbjct: 1 MGISRRGAPPSSPLAASKPSTGSLEVDGEVDSLTTDPPPSLPPSLPAPLPVIEPSGGRVSVMAFYVGQNLDLVSVVQANFLSQQGYKMSDDLLLVPLEDKGERKHSSQEGTVWKNVQSALVVFKHGSVVFFNVPDGEQAKYLHSLSRHCGEVVPQSHRFRETLECWVRPWQEKYHVMGQDVVQLRELNEDSIKVLADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDAMSSGLLEQSKPAWNFNRLDALWNDLRDEFSIGERFGKVEHKISHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYHQILVQ 344
BLAST of EWM23871.1 vs. NCBI_GenBank
Match: gi|168017656|ref|XP_001761363.1| (predicted protein [Physcomitrella patens] >gi|162687369|gb|EDQ73752.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 179.874 bits (455), Expect = 4.241e-49 Identity = 109/307 (35.50%), Postives = 174/307 (56.68%), Query Frame = 0
Query: 163 PAPLPVIEPSGGRVSVMAFYVGQNLDLVSVVQANFLSQQGYKMSDDLLLVPLEDKGERKHSSQE---GTVWKNVQSALVVFKHGSVVFFNVPDGEQAKYLHSLSRHCGEVVPQSHRFRETLE----CWVRPWQEKYHVMGQDVVQLRELNEDSIKVLADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDA-MSSGLLEQSKPAWNFNRLDALWNDLRDEFSIGERFGKVEHKISHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYHQILVQ 461
P P P + + V A Y+ +++DL + + FL + ++L++ K +S + ++ +V F++GS+VFFN D E+ + L +LS+ C + +FRET + VRP ++ GQD + LR L+ D+I+V++ ++G S+AL+ Y KK D M+ F LN +E +G FT M +K LF+LVA N L D + GLLE+S AW +W LRD+F + ERF ++ K++ +Q N +FFLE+L ++KS+ LEWIII+LI EI C+ +Y QIL++
Sbjct: 30 PNPPPKFQQDDVYIPVKACYISRSVDLKRLSEEPFLEITPSR--NNLIIRFTNRPANAKPTSNRPGFAEISRSQDRYMVAFQYGSIVFFNFCDDEEEEALSALSKFC------TDKFRETRKDDYGVLVRPTLRQWSEGGQDRIMLRMLDTDNIRVISSILGQSIALDHYAKKVDEMVNTFSELNRGMENTGTFT-MTRKSLFQLVAAANTTLADVILRLGLLERSDAAWKDANYAQIWEYLRDDFELDERFESLDFKLNIIQHNVRFFLEILQNRKSDTLEWIIILLITGEI---CVGVY-QILLE 323
BLAST of EWM23871.1 vs. NCBI_GenBank
Match: gi|168023742|ref|XP_001764396.1| (predicted protein [Physcomitrella patens] >gi|162684260|gb|EDQ70663.1| predicted protein, partial [Physcomitrella patens]) HSP 1 Score: 169.859 bits (429), Expect = 2.270e-46 Identity = 94/230 (40.87%), Postives = 142/230 (61.74%), Query Frame = 0
Query: 237 LVVFKHGSVVFFNVPDGEQAKYLHSLSRHCGEVVPQSHRFRETLE----CWVRPWQEKYHVMGQDVVQLRELNEDSIKVLADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDA-MSSGLLEQSKPAWNFNRLDALWNDLRDEFSIGERFGKVEHKISHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYHQILVQ 461
+V F++GS+VFFN D E+ + L ++ + C + FRET + VRP ++ GQD + LR L+ D+I+V++ ++G S+AL+ Y KK D M+ F LN +E +G FT M +K LF+LVA N L D + GLLE+S AW +W LRD+F + ERF ++ K++ +Q N +FFLE+L ++KS+ LEWIII+LI EI C+ +Y QIL++
Sbjct: 9 MVAFQYGSIVFFNFGDDEEEEALAAVRKFC------TDEFRETRKDDYGVLVRPTLRQWSEGGQDRIMLRMLDTDNIRVISSILGQSIALDHYAKKVDEMVNTFSELNRGMEKTGTFT-MTRKSLFQLVAAANTTLADVILRLGLLERSDAAWKDANYAQIWEYLRDDFELDERFESLDFKLNIIQHNVRFFLEILQNRKSDTLEWIIILLITGEI---CVGVY-QILLE 227
BLAST of EWM23871.1 vs. NCBI_GenBank
Match: gi|971516510|dbj|GAQ81703.1| (hypothetical protein KFL_000880170 [Klebsormidium nitens]) HSP 1 Score: 167.933 bits (424), Expect = 4.620e-45 Identity = 89/219 (40.64%), Postives = 134/219 (61.19%), Query Frame = 0
Query: 237 LVVFKHGSVVFFNVPDGEQAKYLHSLSRHCGEVVPQSHRFRETLECWVRPWQEKYHVMGQDVVQLRELNEDSIKVLADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDAMSS-GLLEQSKPAWNFNRLDALWNDLRDEFSIGERFGKVEHKISHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDL 454
++VF +G++VFFN E A L +S+ C + + R + +VR EKY V G D V +R+LNE++I+V+ ++G SVAL+ Y + DRM+ F LN + G FT + +KDLFKL+ + N +TD + LL +S AW F +W +R +F I +RF + +K+S +Q+N KFFL VL ++KS+ LEWIII LI+AEI+L D+
Sbjct: 60 MIVFDYGALVFFNFDQSELAAELQVVSQFCETALEE--RMTDDYGVFVRHSLEKYSVGGPDYVLIRDLNENAIRVIGSILGQSVALDHYTVEVDRMIARFGQLNKDMMELGSFT-ITRKDLFKLIGVVNTTITDVIIKLELLNRSDTAWKFADYGKIWEYMRGDFDIADRFDSLNYKLSVIQANVKFFLGVLQNRKSDTLEWIIIALISAEIILGIYDI 275
BLAST of EWM23871.1 vs. NCBI_GenBank
Match: gi|223992709|ref|XP_002286038.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220977353|gb|EED95679.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 172.94 bits (437), Expect = 9.456e-44 Identity = 84/220 (38.18%), Postives = 140/220 (63.64%), Query Frame = 0
Query: 237 LVVFKHGSVVFFNVPDGEQAKYLHSLSRHCGEVVPQSHRFRETLECWVRPWQE-KYHVMGQDVVQLRELNEDSIKVLADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDAMSS-GLLEQSKPAWNFNRLDALWNDLRDEFSIGERFGKVEHKISHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDL 454
+ +++ GSVVFFNV E +K L + +H + + RE E ++P E + D +R+L+ +++ ++++++G +VAL++YN D +L +F +N+SVE G FT M++ LF++VA NN + D + G+ ++S AW+ ++ +AL + +R EF + ERF +E K++ +Q N KFFLEVL+ QKSN LEW+IIVLI+ E VL C+D+
Sbjct: 438 VAIYRFGSVVFFNVTTKEASKLLEQIKKHSTDPIAVGFERREFFEMALQPQLEMATGNISADRAMVRDLDMNTVGIVSNIMGQTVALDWYNDTVDELLANFSNINSSVERFGNFTSMERNSLFQVVARNNSLFIDMVGKLGIKDRSDTAWHLSQYEALHDGMRKEFDLDERFKHIEFKLNLIQQNAKFFLEVLHAQKSNTLEWVIIVLISFECVLMCLDM 657
BLAST of EWM23871.1 vs. NCBI_GenBank
Match: gi|1040837370|ref|XP_017232153.1| (PREDICTED: uncharacterized protein LOC108206386 [Daucus carota subsp. sativus]) HSP 1 Score: 166.777 bits (421), Expect = 1.789e-43 Identity = 100/294 (34.01%), Postives = 168/294 (57.14%), Query Frame = 0
Query: 168 VIEPSGGRVSVMAFYVGQNLDL---VSVVQANFLSQQGYKMSDDLLLVPLEDKGERKHSSQEGTVWKNVQSALVVFKHGSVVFFNVPDGEQAKYLHSLSRHCGEVVPQSHRFRETLECWVRPWQEKYHVMGQDVVQLRELNEDSIKVLADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDA-MSSGLLEQSKPAWNFNRLDALWNDLRDEFSIGERFGKVEHKISHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYHQ 457
V E + + V A++ ++DL V V + NF+ +M++ ++L + K E K S + ++ +VVF++GS+V FNVPD + YL+ + H ++P+ + + E +P + + G D + L+ LN D I+ + V+G S+AL++Y ++ D M+++F +N +E SG F +M+KK LF+LV N L D + GL E+S AW + +W LRDEF + +RF ++ K+ V+ N +F E L ++KS+ LEW+IIVLIA EIV+S D+ +
Sbjct: 96 VEEDAQPSIPVRAYFFSTSVDLKRLVEVNKKNFIPPTS-RMTNYVVLRFGDLKSELKGS--DSSLCGRDCCYIVVFQYGSIVLFNVPDNKIDGYLNLVKTHASGILPEMRK--DEYEVREKPTLDTWMQGGLDFIMLQYLNIDGIRTVGSVLGQSIALDYYVRQVDGMVDEFTGINRDMEKSGTF-KMEKKKLFQLVGKANSNLADVILKLGLFERSDIAWKDAKYAEIWEYLRDEFELTQRFASLDFKLKFVEHNIRFLQESLQNRKSDSLEWLIIVLIAVEIVISIYDIVQK 383
BLAST of EWM23871.1 vs. NCBI_GenBank
Match: gi|1117384162|ref|XP_019462187.1| (PREDICTED: uncharacterized protein LOC109361249 [Lupinus angustifolius]) HSP 1 Score: 167.548 bits (423), Expect = 2.282e-43 Identity = 109/332 (32.83%), Postives = 176/332 (53.01%), Query Frame = 0
Query: 142 EVDGEVDSLTTDPPPSLPPSLPAPLPVIEPSGGRVSVMAFYVGQNLDLVSVVQAN---FLSQQGYKMSDDLLLVPLEDKGERKHSSQEGTVW--KNVQSALVVFKHGSVVFFNVPDGEQAKYLHSLSRHCGEVVPQSH------RFRETLECWVRPWQEKYHVMGQDVVQLRELNEDSIKVLADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDA-MSSGLLEQSKPAWNFNRLDALWNDLRDEFSIGERFGKVEHKISHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYHQILVQ 461
EVD VD + D P S+P V AF+ ++DL S+V+ N F++ +M++ ++L G+ S GT + N +VVF++GS+V FNVP+ E YL + H ++P+ R ++ L W++ G D + L+ LN D I+ + V+G S+AL++Y ++ D M+ +F +N +E +G F +M +K LF+LV N L D + GL E+S AW + +W LRDEF + +RF ++ K+ V+ N +F E+L ++KS+ LEW+II LI AEI+LS D+ H+ +Q
Sbjct: 123 EVDDGVDPVGGDEHDVKPSSIP--------------VRAFFFSTSVDLKSLVEQNKPNFVTPSS-RMTNYVVL----RFGDLSDSRGLGTAFLSGNSGCYMVVFQYGSIVLFNVPEHELDSYLKIVKSHASGLLPEMRKDEYEVREKQALSTWMQG--------GLDYIMLQYLNIDGIRTIGSVLGQSIALDYYGRQVDGMVAEFTDINREMEATGKF-KMQRKKLFQLVGKANSNLADVILKLGLFERSDIAWKDAKYAQIWEYLRDEFELTQRFASLDFKLKFVEHNIRFLQEILQNRKSDFLEWLIIALIGAEILLSLYDIIHRGAMQ 426
BLAST of EWM23871.1 vs. NCBI_GenBank
Match: gi|571482659|ref|XP_003535931.2| (PREDICTED: uncharacterized protein LOC100811261 [Glycine max] >gi|955345639|ref|XP_014618601.1| PREDICTED: uncharacterized protein LOC100811261 [Glycine max] >gi|947084608|gb|KRH33329.1| hypothetical protein GLYMA_10G116500 [Glycine max] >gi|947084609|gb|KRH33330.1| hypothetical protein GLYMA_10G116500 [Glycine max] >gi|947084610|gb|KRH33331.1| hypothetical protein GLYMA_10G116500 [Glycine max] >gi|947084611|gb|KRH33332.1| hypothetical protein GLYMA_10G116500 [Glycine max] >gi|947084612|gb|KRH33333.1| hypothetical protein GLYMA_10G116500 [Glycine max]) HSP 1 Score: 167.162 bits (422), Expect = 2.297e-43 Identity = 98/287 (34.15%), Postives = 163/287 (56.79%), Query Frame = 0
Query: 176 VSVMAFYVGQNLDLVSVVQ---ANFLSQQGYKMSDDLLLVPLEDKGERKHSSQEGTVWKNVQSA-LVVFKHGSVVFFNVPDGEQAKYLHSLSRHCGEVVPQSHRFRETLECWVRPWQEKYHVMGQDVVQLRELNEDSIKVLADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDA-MSSGLLEQSKPAWNFNRLDALWNDLRDEFSIGERFGKVEHKISHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYHQ 457
++V AF+ ++DL S+V+ ANF+ +M++ ++L G+ S GT +VVF++GS+V FNVP+ E YL + +H ++P+ + + E +P + G D + L+ LN D I+ + V+G S+AL++Y ++ D M+ +F +N +E +G F +M +K LF+LV N L D + GL E+S AW + +W LRDEF + +RF ++ K+ V+ N +F E+L ++KS+ LEW+II LI AEI+LS D+ H+
Sbjct: 131 IAVRAFFFSTSVDLKSLVEQNKANFVPPSS-RMTNYVVL----KFGDICVSKGPGTFLSGRNGCYMVVFQYGSIVLFNVPEHEVDAYLKIVKKHASGLLPEMRK--DEYEVREKPALSTWMQGGLDYIMLQYLNIDGIRTIGSVLGQSIALDYYGRQVDGMVAEFTDINREMEATGKF-KMQRKKLFQLVGKANSNLADVILKLGLFERSDIAWKDAKYAQIWEYLRDEFELTQRFASLDFKLKFVEHNIRFLQEILQNRKSDFLEWLIIALIGAEILLSLYDIVHR 409
BLAST of EWM23871.1 vs. NCBI_GenBank
Match: gi|1102702327|gb|OIW01480.1| (hypothetical protein TanjilG_19406 [Lupinus angustifolius]) HSP 1 Score: 167.162 bits (422), Expect = 2.499e-43 Identity = 109/332 (32.83%), Postives = 176/332 (53.01%), Query Frame = 0
Query: 142 EVDGEVDSLTTDPPPSLPPSLPAPLPVIEPSGGRVSVMAFYVGQNLDLVSVVQAN---FLSQQGYKMSDDLLLVPLEDKGERKHSSQEGTVW--KNVQSALVVFKHGSVVFFNVPDGEQAKYLHSLSRHCGEVVPQSH------RFRETLECWVRPWQEKYHVMGQDVVQLRELNEDSIKVLADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDA-MSSGLLEQSKPAWNFNRLDALWNDLRDEFSIGERFGKVEHKISHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYHQILVQ 461
EVD VD + D P S+P V AF+ ++DL S+V+ N F++ +M++ ++L G+ S GT + N +VVF++GS+V FNVP+ E YL + H ++P+ R ++ L W++ G D + L+ LN D I+ + V+G S+AL++Y ++ D M+ +F +N +E +G F +M +K LF+LV N L D + GL E+S AW + +W LRDEF + +RF ++ K+ V+ N +F E+L ++KS+ LEW+II LI AEI+LS D+ H+ +Q
Sbjct: 113 EVDDGVDPVGGDEHDVKPSSIP--------------VRAFFFSTSVDLKSLVEQNKPNFVTPSS-RMTNYVVL----RFGDLSDSRGLGTAFLSGNSGCYMVVFQYGSIVLFNVPEHELDSYLKIVKSHASGLLPEMRKDEYEVREKQALSTWMQG--------GLDYIMLQYLNIDGIRTIGSVLGQSIALDYYGRQVDGMVAEFTDINREMEATGKF-KMQRKKLFQLVGKANSNLADVILKLGLFERSDIAWKDAKYAQIWEYLRDEFELTQRFASLDFKLKFVEHNIRFLQEILQNRKSDFLEWLIIALIGAEILLSLYDIIHRGAMQ 416 The following BLAST results are available for this feature:
BLAST of EWM23871.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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