rna6812, rna6812 (mRNA) Nannochloropsis gaditana

Overview
Namerna6812
Unique Namerna6812
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1045
Alignment locationCM002469.1:561878..562602 -

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Properties
Property NameValue
Productprotein phosphatase
Orig transcript idgnl|cribi|Naga_101009g1.10311.mrna
Orig protein idgnl|cribi|Naga_101009g1.10311
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:561878..562602 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101009g1gene6586Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23877.1cds6796Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6812rna6812-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6812 ID=rna6812|Name=rna6812|organism=Nannochloropsis gaditana|type=mRNA|length=1045bp
GGATTGCGTCATCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCGCCGCTCGCCATCCACCACACACCTCCTGAAACGCCAGCCCTCATCA
GTTCCCGTGGTTCCGCGAGTCATTGGTCACGAAAACGTGCCAAAGCTTGT
GTCTGTAAGCATGATGAGCTTGCGTGACCTTGGACAAGCATGGTATCCGT
AGAGATCGACGCAATAGATGTTTTTTTACATGGATTGAGGGGTACCCGCC
CCGTCGAGGAAAAGAAGAGGGCCTCGCAAGCAGAAACCATGCACACCAGT
GAGCGGGCATTCAACGAGCCTCTCACAGTTTGATACTTAATGCACGTACA
GGTGTGATCGTCCACGCACAGGTATTGTCACGGAGCGATCGGAGAAATGG
TTGCAGGTAAATTGAAAGCCAAGGACCTTCGTACCAAGTCCAAGGCCGAG
ATGGTCAAGCAGCTGGAGGAGCTCAAGAAGGAGCTTTCCGAGCTGCGGGT
GGCGAAGGTGACTGGCGGGGCAGCGTCGAAACTGGCGAAAATCAAGGTGG
TTCGCAAAAGCATCGCTCGCGTCCTGACTGTCTACAATCAGACCCAGAAG
GCCAAGCTCCGTGAGAAGTTCACAGGAAGCAAATACATGCCCATGGATCT
GCGCAGGAAAAAAACACGTGCTATCCGACGGCGACTAACGAAGCACGAGG
AAGGGCTGAAAACCGTCCGGGCTGTGAAAAGGGAGCAAGCGGTTCCGAAG
CGCAGATACGCGTTGAGGGCATAGACAAGGAGGGAAGGAGAAAGGGAGGG
GAGAAGGGAAAGAGGGAATAGGGGAGGGGTCGAGGGGAAGGCATATGGAC
GCTGGCGTCGGATTGAATTTCCTGGTCAATGTGTTCGGATGCGTGGTTGA
ATGAGCGAAGGGGGCCTCTGTCAGTGCGGGAGAGGGCGACAAGAGGGGGG
CGTCCTGCAGGGCGGTAGATGTGGCAGACGAACGGCCTCGTGCATGCACT
AAGCAAGACTGAGAAAAGGAATCCACACACGAGCGGCAAGTGTAT
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protein sequence of rna6812

>rna6812-protein ID=rna6812-protein|Name=rna6812|organism=Nannochloropsis gaditana|type=polypeptide|length=177bp
DFGPDDEDIAWTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEV
VSLVVGWREEGREGRAIATLLVEAALERVADSLGMSVEELGRVKEGRERR
RKHDDITVVVVLLEEERKGECPLEGSQAWEEEISGEVDDFIYPEEEGGAE
GGAEGGIEGGEEGRPDLMSLDEGRKEL
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mRNA from alignment at CM002469.1:561878..562602-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6812 ID=rna6812|Name=rna6812|organism=Nannochloropsis gaditana|type=mRNA|length=725bp|location=Sequence derived from alignment at CM002469.1:561878..562602- (Nannochloropsis gaditana)
GATTTCGGTCCCGACGACGAAGACATCGCCTGGACCCCTCCCTACGTGAG
CGCCATCCCCGAGGTCGCCTCCATCGCCCTCAACCGCCTCGATCAGTTTC
TGGTGCTGGCCTCGGACGGCCTGTGGGACGTGTTTGAGAACGAGGAGGTG
GTGAGCCTGGTAGTGGGCTGGAGGGAGGAAGGGAGGGAGGGCAGGGCGAT
CGCGACCCTCTTGGTGGAGGCGGCCTTGGAACGGGTGGCAGACAGCCTTG
GGATGAGCGTGGAGGAGCTGGGGAGGGTGAAGGAGGGGAGGGAGCGGCGG
AGGAAGCATGACGACATCACGGTGGTGGTGGTGCTCTTGGAGGAGGAGAG
GAAAGGGGAGTGCCCCTTGGAGGGCTCGCAGGCGTGGGAGGAGGAGATCA
GCGGGGAGGTGGATGACTTTATTTACCCCGAGGAAGAGGGCGGGGCGGAG
GGCGGGGCGGAGGGCGGGATAGAGGGGGGGGAAGAGGGCCGGCCAGACCT
GATGAGTTTGGACGAGGGAAGGAAGGAATTGTAGTCCGGAGGGGAGCAAT
GCGATAGCTTTAGGGTGGGCGAGACTGGCCGAAAAGAGCGCCATTGAAAA
CTCGGTTGCGGGAAGCAGTGGAAAAGAACCACAGCAATGGAGAAAATGTG
AGTAGACGCCCTCTGGGGGGTCAAAGCAATGCCTGAAGGCCGCATGCGAG
CACAAAAACAACGTCGTTCCAGCTG
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Coding sequence (CDS) from alignment at CM002469.1:561878..562602-

>rna6812 ID=rna6812|Name=rna6812|organism=Nannochloropsis gaditana|type=CDS|length=534bp|location=Sequence derived from alignment at CM002469.1:561878..562602- (Nannochloropsis gaditana)
GATTTCGGTCCCGACGACGAAGACATCGCCTGGACCCCTCCCTACGTGAG
CGCCATCCCCGAGGTCGCCTCCATCGCCCTCAACCGCCTCGATCAGTTTC
TGGTGCTGGCCTCGGACGGCCTGTGGGACGTGTTTGAGAACGAGGAGGTG
GTGAGCCTGGTAGTGGGCTGGAGGGAGGAAGGGAGGGAGGGCAGGGCGAT
CGCGACCCTCTTGGTGGAGGCGGCCTTGGAACGGGTGGCAGACAGCCTTG
GGATGAGCGTGGAGGAGCTGGGGAGGGTGAAGGAGGGGAGGGAGCGGCGG
AGGAAGCATGACGACATCACGGTGGTGGTGGTGCTCTTGGAGGAGGAGAG
GAAAGGGGAGTGCCCCTTGGAGGGCTCGCAGGCGTGGGAGGAGGAGATCA
GCGGGGAGGTGGATGACTTTATTTACCCCGAGGAAGAGGGCGGGGCGGAG
GGCGGGGCGGAGGGCGGGATAGAGGGGGGGGAAGAGGGCCGGCCAGACCT
GATGAGTTTGGACGAGGGAAGGAAGGAATTGTAG
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Synonyms
Publications