EWM23877.1, cds6796 (CDS) Nannochloropsis gaditana

Overview
NameEWM23877.1
Unique Namecds6796
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:562069..562602 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23877.1
Productprotein phosphatase
Partialtrue
Orig transcript idgnl|cribi|Naga_101009g1.10311.mrna
GbkeyCDS
End range.
End range562602
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:562069..562602 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004722protein serine/threonine phosphatase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006470protein dephosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR015655PP2C
IPR001932PPM-type_phosphatase_dom
Homology
BLAST of EWM23877.1 vs. NCBI_GenBank
Match: gi|585105156|gb|EWM23877.1| (protein phosphatase, partial [Nannochloropsis gaditana])

HSP 1 Score: 338.961 bits (868), Expect = 1.723e-117
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
Query:    1 DFGPDDEDIAWTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGREGRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLEEERKGECPLEGSQAWEEEISGEVDDFIYPEEEGGAEGGAEGGIEGGEEGRPDLMSLDEGRKEL 177
            DFGPDDEDIAWTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGREGRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLEEERKGECPLEGSQAWEEEISGEVDDFIYPEEEGGAEGGAEGGIEGGEEGRPDLMSLDEGRKEL
Sbjct:    1 DFGPDDEDIAWTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGREGRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLEEERKGECPLEGSQAWEEEISGEVDDFIYPEEEGGAEGGAEGGIEGGEEGRPDLMSLDEGRKEL 177          
BLAST of EWM23877.1 vs. NCBI_GenBank
Match: gi|301122723|ref|XP_002909088.1| (protein phosphatase 2C, putative [Phytophthora infestans T30-4] >gi|262099850|gb|EEY57902.1| protein phosphatase 2C, putative [Phytophthora infestans T30-4])

HSP 1 Score: 98.5969 bits (244), Expect = 4.656e-21
Identity = 50/107 (46.73%), Postives = 66/107 (61.68%), Query Frame = 0
Query:   11 WTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGRE---GRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLE 114
            +TPPY++AIPEV S  L+  D+FL++ SDGLWD   NEE V +V G    G     GRA    LVE  L++ A   GM+ +EL  +  G  RRR+HDD TVVV+  +
Sbjct:  319 YTPPYITAIPEVTSHKLSEGDKFLIIGSDGLWDYLSNEEAVEIVNGQASCGNHDLAGRA----LVERVLQKAAKRYGMTYQELLSLPPGSHRRRRHDDTTVVVLFFD 421          
BLAST of EWM23877.1 vs. NCBI_GenBank
Match: gi|970659737|gb|KUF97351.1| (Phospholipid-transporting ATPase IK [Phytophthora nicotianae])

HSP 1 Score: 97.4413 bits (241), Expect = 8.372e-21
Identity = 50/107 (46.73%), Postives = 65/107 (60.75%), Query Frame = 0
Query:   11 WTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGRE---GRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLE 114
            +TPPY++AIPEV S  L   D+FL++ SDGLWD   NEE V +V G    G     GRA    LVE  L++ A   GM+ +EL  +  G  RRR+HDD TVVV+  +
Sbjct:  282 YTPPYITAIPEVKSHKLAEGDKFLIIGSDGLWDYLSNEEAVEIVNGQASCGNHDLAGRA----LVERVLQKAAKRYGMTYQELLSLPPGSHRRRRHDDTTVVVLFFD 384          
BLAST of EWM23877.1 vs. NCBI_GenBank
Match: gi|568025079|gb|ETL99099.1| (hypothetical protein L917_03999 [Phytophthora parasitica] >gi|570333368|gb|ETO81316.1| hypothetical protein F444_04341 [Phytophthora parasitica P1976] >gi|570957402|gb|ETP22381.1| hypothetical protein F441_04233 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 97.4413 bits (241), Expect = 1.187e-20
Identity = 50/107 (46.73%), Postives = 65/107 (60.75%), Query Frame = 0
Query:   11 WTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGRE---GRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLE 114
            +TPPY++AIPEV S  L   D+FL++ SDGLWD   NEE V +V G    G     GRA    LVE  L++ A   GM+ +EL  +  G  RRR+HDD TVVV+  +
Sbjct:  319 YTPPYITAIPEVKSHKLAEGDKFLIIGSDGLWDYLSNEEAVEIVNGQASCGNHDLAGRA----LVERVLQKAAKRYGMTYQELLSLPPGSHRRRRHDDTTVVVLFFD 421          
BLAST of EWM23877.1 vs. NCBI_GenBank
Match: gi|566029733|gb|ETI52644.1| (hypothetical protein F443_04288 [Phytophthora parasitica P1569] >gi|567967235|gb|ETK92415.1| hypothetical protein L915_04143 [Phytophthora parasitica] >gi|567995680|gb|ETL45810.1| hypothetical protein L916_04098 [Phytophthora parasitica] >gi|568055503|gb|ETM52249.1| hypothetical protein L914_04109 [Phytophthora parasitica] >gi|570992847|gb|ETP50263.1| hypothetical protein F442_04254 [Phytophthora parasitica P10297])

HSP 1 Score: 97.4413 bits (241), Expect = 1.199e-20
Identity = 50/107 (46.73%), Postives = 65/107 (60.75%), Query Frame = 0
Query:   11 WTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGRE---GRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLE 114
            +TPPY++AIPEV S  L   D+FL++ SDGLWD   NEE V +V G    G     GRA    LVE  L++ A   GM+ +EL  +  G  RRR+HDD TVVV+  +
Sbjct:  319 YTPPYITAIPEVKSHKLAEGDKFLIIGSDGLWDYLSNEEAVEIVNGQASCGNHDLAGRA----LVERVLQKAAKRYGMTYQELLSLPPGSHRRRRHDDTTVVVLFFD 421          
BLAST of EWM23877.1 vs. NCBI_GenBank
Match: gi|675185199|ref|XP_008901484.1| (hypothetical protein PPTG_08288 [Phytophthora parasitica INRA-310] >gi|568098739|gb|ETN13466.1| hypothetical protein PPTG_08288 [Phytophthora parasitica INRA-310])

HSP 1 Score: 97.4413 bits (241), Expect = 1.326e-20
Identity = 50/107 (46.73%), Postives = 65/107 (60.75%), Query Frame = 0
Query:   11 WTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGRE---GRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLE 114
            +TPPY++AIPEV S  L   D+FL++ SDGLWD   NEE V +V G    G     GRA    LVE  L++ A   GM+ +EL  +  G  RRR+HDD TVVV+  +
Sbjct:  319 YTPPYITAIPEVKSHKLAEGDKFLIIGSDGLWDYLSNEEAVEIVNGQASCGNHDLAGRA----LVERVLQKAAKRYGMTYQELLSLPPGSHRRRRHDDTTVVVLFFD 421          
BLAST of EWM23877.1 vs. NCBI_GenBank
Match: gi|695426892|ref|XP_009529534.1| (hypothetical protein PHYSODRAFT_346687 [Phytophthora sojae] >gi|348675967|gb|EGZ15785.1| hypothetical protein PHYSODRAFT_346687 [Phytophthora sojae])

HSP 1 Score: 97.4413 bits (241), Expect = 1.754e-20
Identity = 50/107 (46.73%), Postives = 65/107 (60.75%), Query Frame = 0
Query:   11 WTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGRE---GRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLE 114
            +TPPY++AIPEV S  L   D+FL++ SDGLWD   NEE V +V G    G     GRA    LVE  L++ A   GM+ +EL  +  G  RRR+HDD TVVV+  +
Sbjct:  355 YTPPYITAIPEVKSHKLQEGDKFLIIGSDGLWDYLSNEEAVEVVNGQASCGNHDLAGRA----LVERVLQKAAKRYGMTYQELLSLPPGSHRRRRHDDTTVVVLFFD 457          
BLAST of EWM23877.1 vs. NCBI_GenBank
Match: gi|970635570|gb|KUF80437.1| (protein phosphatase 2C 64 [Phytophthora nicotianae])

HSP 1 Score: 95.1301 bits (235), Expect = 8.073e-20
Identity = 49/107 (45.79%), Postives = 64/107 (59.81%), Query Frame = 0
Query:   11 WTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGRE---GRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLE 114
            +TPPY++A PEV S  L   D+FL++ SDGLWD   NEE V +V G    G     GRA    LVE  L++ A   GM+ +EL  +  G  RRR+HDD TVVV+  +
Sbjct:  319 YTPPYITAXPEVKSHKLAEGDKFLIIGSDGLWDYLSNEEAVEIVNGQASCGNHDLAGRA----LVERVLQKAAKRYGMTYQELLSLPPGSHRRRRHDDTTVVVLFFD 421          
BLAST of EWM23877.1 vs. NCBI_GenBank
Match: gi|1214713590|gb|OWZ24477.1| (Protein phosphatase 2C [Phytophthora megakarya])

HSP 1 Score: 94.3597 bits (233), Expect = 1.305e-19
Identity = 49/107 (45.79%), Postives = 65/107 (60.75%), Query Frame = 0
Query:   11 WTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGRE---GRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLE 114
            +TPPY++AIPEV S  L   D+F+++ SDGLWD   NEE V +V G    G     GRA    LVE  L++ A   GM+ +EL  +  G  RRR+HDD TVVV+  +
Sbjct:  316 FTPPYITAIPEVKSHKLEEGDKFVIIGSDGLWDYLSNEEAVEVVNGQASCGNHDLAGRA----LVERVLQKAAKRYGMTYQELLSLPPGSHRRRRHDDTTVVVLFFD 418          
BLAST of EWM23877.1 vs. NCBI_GenBank
Match: gi|848859407|ref|XP_012830599.1| (PREDICTED: probable protein phosphatase 2C 40 [Erythranthe guttata])

HSP 1 Score: 88.1965 bits (217), Expect = 2.996e-19
Identity = 46/108 (42.59%), Postives = 66/108 (61.11%), Query Frame = 0
Query:   11 WTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGREGRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLEEERK 118
             +PPYVS  P + +  ++  D F+VL SDGL+D F N+EVV+LV  +      G   A  L+E    R ADS G S+EEL  +  GR RR+ HDD+TV+V++L   ++
Sbjct:   19 LSPPYVSVQPSLTAHEISNSDHFVVLGSDGLFDFFTNDEVVNLVHSYTSRYPYGDP-AKFLLEQLAARAADSAGFSMEELMSIPAGR-RRKYHDDVTVIVIVLGTNKR 124          
The following BLAST results are available for this feature:
BLAST of EWM23877.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105156|gb|EWM23877.1|1.723e-117100.00protein phosphatase, partial [Nannochloropsis gadi... [more]
gi|301122723|ref|XP_002909088.1|4.656e-2146.73protein phosphatase 2C, putative [Phytophthora inf... [more]
gi|970659737|gb|KUF97351.1|8.372e-2146.73Phospholipid-transporting ATPase IK [Phytophthora ... [more]
gi|568025079|gb|ETL99099.1|1.187e-2046.73hypothetical protein L917_03999 [Phytophthora para... [more]
gi|566029733|gb|ETI52644.1|1.199e-2046.73hypothetical protein F443_04288 [Phytophthora para... [more]
gi|675185199|ref|XP_008901484.1|1.326e-2046.73hypothetical protein PPTG_08288 [Phytophthora para... [more]
gi|695426892|ref|XP_009529534.1|1.754e-2046.73hypothetical protein PHYSODRAFT_346687 [Phytophtho... [more]
gi|970635570|gb|KUF80437.1|8.073e-2045.79protein phosphatase 2C 64 [Phytophthora nicotianae... [more]
gi|1214713590|gb|OWZ24477.1|1.305e-1945.79Protein phosphatase 2C [Phytophthora megakarya][more]
gi|848859407|ref|XP_012830599.1|2.996e-1942.59PREDICTED: probable protein phosphatase 2C 40 [Ery... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6812rna6812Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications