EWM23877.1, cds6796 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23877.1 vs. NCBI_GenBank
Match: gi|585105156|gb|EWM23877.1| (protein phosphatase, partial [Nannochloropsis gaditana]) HSP 1 Score: 338.961 bits (868), Expect = 1.723e-117 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 1 DFGPDDEDIAWTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGREGRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLEEERKGECPLEGSQAWEEEISGEVDDFIYPEEEGGAEGGAEGGIEGGEEGRPDLMSLDEGRKEL 177
DFGPDDEDIAWTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGREGRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLEEERKGECPLEGSQAWEEEISGEVDDFIYPEEEGGAEGGAEGGIEGGEEGRPDLMSLDEGRKEL
Sbjct: 1 DFGPDDEDIAWTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGREGRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLEEERKGECPLEGSQAWEEEISGEVDDFIYPEEEGGAEGGAEGGIEGGEEGRPDLMSLDEGRKEL 177
BLAST of EWM23877.1 vs. NCBI_GenBank
Match: gi|301122723|ref|XP_002909088.1| (protein phosphatase 2C, putative [Phytophthora infestans T30-4] >gi|262099850|gb|EEY57902.1| protein phosphatase 2C, putative [Phytophthora infestans T30-4]) HSP 1 Score: 98.5969 bits (244), Expect = 4.656e-21 Identity = 50/107 (46.73%), Postives = 66/107 (61.68%), Query Frame = 0
Query: 11 WTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGRE---GRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLE 114
+TPPY++AIPEV S L+ D+FL++ SDGLWD NEE V +V G G GRA LVE L++ A GM+ +EL + G RRR+HDD TVVV+ +
Sbjct: 319 YTPPYITAIPEVTSHKLSEGDKFLIIGSDGLWDYLSNEEAVEIVNGQASCGNHDLAGRA----LVERVLQKAAKRYGMTYQELLSLPPGSHRRRRHDDTTVVVLFFD 421
BLAST of EWM23877.1 vs. NCBI_GenBank
Match: gi|970659737|gb|KUF97351.1| (Phospholipid-transporting ATPase IK [Phytophthora nicotianae]) HSP 1 Score: 97.4413 bits (241), Expect = 8.372e-21 Identity = 50/107 (46.73%), Postives = 65/107 (60.75%), Query Frame = 0
Query: 11 WTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGRE---GRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLE 114
+TPPY++AIPEV S L D+FL++ SDGLWD NEE V +V G G GRA LVE L++ A GM+ +EL + G RRR+HDD TVVV+ +
Sbjct: 282 YTPPYITAIPEVKSHKLAEGDKFLIIGSDGLWDYLSNEEAVEIVNGQASCGNHDLAGRA----LVERVLQKAAKRYGMTYQELLSLPPGSHRRRRHDDTTVVVLFFD 384
BLAST of EWM23877.1 vs. NCBI_GenBank
Match: gi|568025079|gb|ETL99099.1| (hypothetical protein L917_03999 [Phytophthora parasitica] >gi|570333368|gb|ETO81316.1| hypothetical protein F444_04341 [Phytophthora parasitica P1976] >gi|570957402|gb|ETP22381.1| hypothetical protein F441_04233 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 97.4413 bits (241), Expect = 1.187e-20 Identity = 50/107 (46.73%), Postives = 65/107 (60.75%), Query Frame = 0
Query: 11 WTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGRE---GRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLE 114
+TPPY++AIPEV S L D+FL++ SDGLWD NEE V +V G G GRA LVE L++ A GM+ +EL + G RRR+HDD TVVV+ +
Sbjct: 319 YTPPYITAIPEVKSHKLAEGDKFLIIGSDGLWDYLSNEEAVEIVNGQASCGNHDLAGRA----LVERVLQKAAKRYGMTYQELLSLPPGSHRRRRHDDTTVVVLFFD 421
BLAST of EWM23877.1 vs. NCBI_GenBank
Match: gi|566029733|gb|ETI52644.1| (hypothetical protein F443_04288 [Phytophthora parasitica P1569] >gi|567967235|gb|ETK92415.1| hypothetical protein L915_04143 [Phytophthora parasitica] >gi|567995680|gb|ETL45810.1| hypothetical protein L916_04098 [Phytophthora parasitica] >gi|568055503|gb|ETM52249.1| hypothetical protein L914_04109 [Phytophthora parasitica] >gi|570992847|gb|ETP50263.1| hypothetical protein F442_04254 [Phytophthora parasitica P10297]) HSP 1 Score: 97.4413 bits (241), Expect = 1.199e-20 Identity = 50/107 (46.73%), Postives = 65/107 (60.75%), Query Frame = 0
Query: 11 WTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGRE---GRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLE 114
+TPPY++AIPEV S L D+FL++ SDGLWD NEE V +V G G GRA LVE L++ A GM+ +EL + G RRR+HDD TVVV+ +
Sbjct: 319 YTPPYITAIPEVKSHKLAEGDKFLIIGSDGLWDYLSNEEAVEIVNGQASCGNHDLAGRA----LVERVLQKAAKRYGMTYQELLSLPPGSHRRRRHDDTTVVVLFFD 421
BLAST of EWM23877.1 vs. NCBI_GenBank
Match: gi|675185199|ref|XP_008901484.1| (hypothetical protein PPTG_08288 [Phytophthora parasitica INRA-310] >gi|568098739|gb|ETN13466.1| hypothetical protein PPTG_08288 [Phytophthora parasitica INRA-310]) HSP 1 Score: 97.4413 bits (241), Expect = 1.326e-20 Identity = 50/107 (46.73%), Postives = 65/107 (60.75%), Query Frame = 0
Query: 11 WTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGRE---GRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLE 114
+TPPY++AIPEV S L D+FL++ SDGLWD NEE V +V G G GRA LVE L++ A GM+ +EL + G RRR+HDD TVVV+ +
Sbjct: 319 YTPPYITAIPEVKSHKLAEGDKFLIIGSDGLWDYLSNEEAVEIVNGQASCGNHDLAGRA----LVERVLQKAAKRYGMTYQELLSLPPGSHRRRRHDDTTVVVLFFD 421
BLAST of EWM23877.1 vs. NCBI_GenBank
Match: gi|695426892|ref|XP_009529534.1| (hypothetical protein PHYSODRAFT_346687 [Phytophthora sojae] >gi|348675967|gb|EGZ15785.1| hypothetical protein PHYSODRAFT_346687 [Phytophthora sojae]) HSP 1 Score: 97.4413 bits (241), Expect = 1.754e-20 Identity = 50/107 (46.73%), Postives = 65/107 (60.75%), Query Frame = 0
Query: 11 WTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGRE---GRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLE 114
+TPPY++AIPEV S L D+FL++ SDGLWD NEE V +V G G GRA LVE L++ A GM+ +EL + G RRR+HDD TVVV+ +
Sbjct: 355 YTPPYITAIPEVKSHKLQEGDKFLIIGSDGLWDYLSNEEAVEVVNGQASCGNHDLAGRA----LVERVLQKAAKRYGMTYQELLSLPPGSHRRRRHDDTTVVVLFFD 457
BLAST of EWM23877.1 vs. NCBI_GenBank
Match: gi|970635570|gb|KUF80437.1| (protein phosphatase 2C 64 [Phytophthora nicotianae]) HSP 1 Score: 95.1301 bits (235), Expect = 8.073e-20 Identity = 49/107 (45.79%), Postives = 64/107 (59.81%), Query Frame = 0
Query: 11 WTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGRE---GRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLE 114
+TPPY++A PEV S L D+FL++ SDGLWD NEE V +V G G GRA LVE L++ A GM+ +EL + G RRR+HDD TVVV+ +
Sbjct: 319 YTPPYITAXPEVKSHKLAEGDKFLIIGSDGLWDYLSNEEAVEIVNGQASCGNHDLAGRA----LVERVLQKAAKRYGMTYQELLSLPPGSHRRRRHDDTTVVVLFFD 421
BLAST of EWM23877.1 vs. NCBI_GenBank
Match: gi|1214713590|gb|OWZ24477.1| (Protein phosphatase 2C [Phytophthora megakarya]) HSP 1 Score: 94.3597 bits (233), Expect = 1.305e-19 Identity = 49/107 (45.79%), Postives = 65/107 (60.75%), Query Frame = 0
Query: 11 WTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGRE---GRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLE 114
+TPPY++AIPEV S L D+F+++ SDGLWD NEE V +V G G GRA LVE L++ A GM+ +EL + G RRR+HDD TVVV+ +
Sbjct: 316 FTPPYITAIPEVKSHKLEEGDKFVIIGSDGLWDYLSNEEAVEVVNGQASCGNHDLAGRA----LVERVLQKAAKRYGMTYQELLSLPPGSHRRRRHDDTTVVVLFFD 418
BLAST of EWM23877.1 vs. NCBI_GenBank
Match: gi|848859407|ref|XP_012830599.1| (PREDICTED: probable protein phosphatase 2C 40 [Erythranthe guttata]) HSP 1 Score: 88.1965 bits (217), Expect = 2.996e-19 Identity = 46/108 (42.59%), Postives = 66/108 (61.11%), Query Frame = 0
Query: 11 WTPPYVSAIPEVASIALNRLDQFLVLASDGLWDVFENEEVVSLVVGWREEGREGRAIATLLVEAALERVADSLGMSVEELGRVKEGRERRRKHDDITVVVVLLEEERK 118
+PPYVS P + + ++ D F+VL SDGL+D F N+EVV+LV + G A L+E R ADS G S+EEL + GR RR+ HDD+TV+V++L ++
Sbjct: 19 LSPPYVSVQPSLTAHEISNSDHFVVLGSDGLFDFFTNDEVVNLVHSYTSRYPYGDP-AKFLLEQLAARAADSAGFSMEELMSIPAGR-RRKYHDDVTVIVIVLGTNKR 124 The following BLAST results are available for this feature:
BLAST of EWM23877.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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