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Properties
| Property Name | Value |
|---|
| Product | obp33pep like protein |
| Orig transcript id | gnl|cribi|Naga_100129g13.1892.mrna |
| Orig protein id | gnl|cribi|Naga_100129g13.1892 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:191395..192492 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna68 ID=rna68|Name=rna68|organism=Nannochloropsis gaditana|type=mRNA|length=1280bp
GAGAAGACGCGGTTTTTGCGCCATACACTTTATCGACAGGATTGAAGAGG
GCTTCGTGAGGAGGTGACCTCCTTTTGTCGATAGACTGTCGTCATTGACC
GCACCTTCCATTTTTCTAGCGTGTTTATTGATCAACCGGAGTCTGATGAC
ATAATTTGCATACCTGTACCATTATATGCGACACGTAAATTCATGGTGGA
GTTGAAAATTGTCGGTTACAGTACGCCACTGGATGTCAACCTCCCCACCC
TTACTAAGATAGTATTTCACTACGGCATCCTCAGTATAAACTCACGCTAC
ACAAAAACTCAAATGCTCTCCAGATTTCTCCCCCTGCCGCAATGAATATC
AGGCTGTAGGAGCAAGCTCGTGAGGGGGCATTTTGTTTAGCGCAGTACCA
TGCACAACAAACGTGCTGGATACATTCCATCAGTACTGGGGCCCGTGGCA
TCAGTCCTTTTCCTTTTGCGCGGTATGCGAGCTGTCACTTTCCTCTCATG
GCCGCAGTCGATAAAATTAACCGCTGCATTTAGTACGACTGCTGCCACTC
GGGTGGTTGCGCATACTGCCTTGCGGACTGGCAGCATGACTGTATTTGGA
CCATTAATGGCGGCCACCAAAAGCGCGTCATTCAAGACTTTGGCCGGACC
AGCGGAGTATGAAGAGATAATAAAAAAATCGCGTTTCCTGTCCCGCGCAA
CGCCTGCTTCTTCTTTTGCCGAAGCTCAAACATTCTTGAGAGATGTAGGA
GATTTGAAGGCTTCGCACAATTGCTGGGCTTGGCGGGGCCATGGGGAAGA
GCGGAGCTCCGACGATGGTGAACCTGGAGGGACAGCAGGGCGGCCCATTC
TCTCGGCAATAGAGAGCGAGGACCTGGTCGACGTGATGGTGGTGGTTACA
CGGTACTTTGGGGGCATCAAGCTTGGTGCTGGCGGGCTTGTCCGGGCTTA
CGGTGGGGTCGCCCGCACGTGCCTAAGGAACGCAGAGACTCTCACACACA
TCCCCAAGGTTCTTGTGAGACTAAGAGCGCCCTTGTCTATGTCTGGAGCG
GTGTTTCAGACTATCAATCGCACCGACAAAATTAAAGAGGATTATACGGC
CGAGGAGATTATTGTTGACGTGAAGGTAGATGCCGCTTTAATCGACAATC
TACGACAGCAGCTGCAGGACGCGACAAGGGGGTCAGGCAGCTTAGAGGAA
TGCTGATGTTCAAGGCCATATTTTTCAAAGGCATTCTTGGAAATAAAGAA
ATTAAATTGCACATATGAAGGCAACACAAT back to topprotein sequence of rna68 >rna68-protein ID=rna68-protein|Name=rna68|organism=Nannochloropsis gaditana|type=polypeptide|length=233bp
MEGAVNDDSLSTKGGHLLTKPSSILSIKCMAQKPRLLLLLHHISKRQNVR
TLLTSAAAFGAEVLVVGQPSFNETSHVPRRLAEALTQGENASICQPQPLY
RRFHGTLEECRDQLREQNVQIWGVEIGEAAVNVEEIPWATSASKWEKEGR
GGIALLLGNEGTGMSARQARVCDGFVYISQYGQGTASLNVAVAGSIVMHR
FSEWAADSCQGGAEEERHVNDEFSASSVSSRGM back to topmRNA from alignment at CM002455.1:191395..192492+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna68 ID=rna68|Name=rna68|organism=Nannochloropsis gaditana|type=mRNA|length=1098bp|location=Sequence derived from alignment at CM002455.1:191395..192492+ (Nannochloropsis gaditana)
GCCGTAGTGAAATACTATCTTAGtaagggtggggaggttgacatCCAGTG
GCGTACTGTAACCGACAATTTTCAACTCCACCATGAATTTACGTGTCGCA
TATAATGGTACAGGTATGCAAATTATGTCATCAGACTCCGGTTGATCAAT
AAACACGCTAGAAAAATGGAAGGTGCGGTCAATGACGACAGTCTATCGAC
AAAAGGAGGTCACCTCCTCACGAAGCCCTCTTCAATCCTGTCGATAAAGT
GTATGGCGCAAAAAccgcgtcttctcctccttttacACCATATATCAAAA
CGACAAAATGTTCGTACTCTGCTCACTTCGGCTGCAGCCTTTGGTGCGGA
AGTACTGGTGGTTGGTCAGCCCAGCTTTAATGAAACCTCGCACGTACCTC
GACGACTCGCGGAAGCTTTGACACAAGGGGAAAACGCGTCAATTTGCCAG
CCTCAACCACTATATCGGCGCTTCCATGGTACACTAGAAGAATGCCGTGA
TCAACTACGTGAGCAGAATGTGCAAATTTGGGGAGTAGAGATCGGTGAGG
CGGCGGTGAATGTTGAGGAGATACCATGGGCAACGTCGGCATCcaagtgg
gagaaggagggtcgAGGAGGCATTGCCCTCTTGTTGGGAAACGAAGGTAC
AGGGATGTCTGCACGGCAAGCTCGGGTGTGTGATGGCTTTGTTTACATCA
GCCAGTACGGGCAGGTGCGTGTTTTTTGGGGGTCGGAGGGTGTCGACGGA
TGGCTCGAAGAGTTCTATTGAGTGCACATTGCCCCTCTGACTGCCGTtgt
tgtcctccttcttccatggTATATCCAGGGGACCGCGTCACTGAACGTGG
CTGTTGCAGGAAGCATCGTCATGCACCGGTTCAGCGAGTGGGCGGCCGAC
TCCTGCCAAGGCGGTgccgaagaggaaagacaTGTGAATGACGAATTTTC
AGCGAGCTCCGTATCGAGTCGAGGCATGTGACTGGCTACATAAAACGAAC
GCATTTCGGACAAACGCCCACGCATAAATGGCCATTTGTTTGTACATTTT
GGACTTTCTCCCACCAAGTCTCCGCCCCATCCCCCATGCAATTgccat back to topCoding sequence (CDS) from alignment at CM002455.1:191395..192492+ >rna68 ID=rna68|Name=rna68|organism=Nannochloropsis gaditana|type=CDS|length=1404bp|location=Sequence derived from alignment at CM002455.1:191395..192492+ (Nannochloropsis gaditana)
ATGGAAGGTGCGGTCAATGACGACAGTCTATCGACAAAAGGAGGTCACCT
CCTCACGAAGCCCTCTTCAATCCTGTCGATAAAGTGTATGGCGCAAAAAc
cgcgtcttctcctccttttacACCATATATCAAAACGACAAAATGTTCGT
ACTCTGCTCACTTCGGCTGCAGCCTTTGGTGCGGAAGTACTGGTGGTTGG
TCAGCCCAGCTTTAATGAAACCTCGCACGTACCTCGACGACTCGCGGAAG
CTTTGACACAAGGGGAAAACGCGTCAATTTGCCAGCCTCAACCACTATAT
CGGCGCTTCCATGGTACACTAGAAGAATGCCGTGATCAACTACGTGAGCA
GAATGTGCAAATTTGGGGAGTAGAGATCGGTGAGGCGGCGGTGAATGTTG
AGGAGATACCATGGGCAACGTCGGCATCcaagtgggagaaggagggtcgA
GGAGGCATTGCCCTCTTGTTGGGAAACGAAGGTACAGGGATGTCTGCACG
GCAAGCTCGGGTGTGTGATGGCTTTGTTTACATCAGCCAGTACGGGCAGG
GGACCGCGTCACTGAACGTGGCTGTTGCAGGAAGCATCGTCATGCACCGG
TTCAGCGAGTGGGCGGCCGACTCCTGCCAAGGCGGTgccgaagaggaaag
acaTGTGAATGACGAATTTTCAGCGAGCTCCGTATCGAGTCGAGGCATGT
GAATGGAAGGTGCGGTCAATGACGACAGTCTATCGACAAAAGGAGGTCAC
CTCCTCACGAAGCCCTCTTCAATCCTGTCGATAAAGTGTATGGCGCAAAA
AccgcgtcttctcctccttttacACCATATATCAAAACGACAAAATGTTC
GTACTCTGCTCACTTCGGCTGCAGCCTTTGGTGCGGAAGTACTGGTGGTT
GGTCAGCCCAGCTTTAATGAAACCTCGCACGTACCTCGACGACTCGCGGA
AGCTTTGACACAAGGGGAAAACGCGTCAATTTGCCAGCCTCAACCACTAT
ATCGGCGCTTCCATGGTACACTAGAAGAATGCCGTGATCAACTACGTGAG
CAGAATGTGCAAATTTGGGGAGTAGAGATCGGTGAGGCGGCGGTGAATGT
TGAGGAGATACCATGGGCAACGTCGGCATCcaagtgggagaaggagggtc
gAGGAGGCATTGCCCTCTTGTTGGGAAACGAAGGTACAGGGATGTCTGCA
CGGCAAGCTCGGGTGTGTGATGGCTTTGTTTACATCAGCCAGTACGGGCA
GGGGACCGCGTCACTGAACGTGGCTGTTGCAGGAAGCATCGTCATGCACC
GGTTCAGCGAGTGGGCGGCCGACTCCTGCCAAGGCGGTgccgaagaggaa
agacaTGTGAATGACGAATTTTCAGCGAGCTCCGTATCGAGTCGAGGCAT
GTGA back to top
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