EWM30614.1, cds68 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30614.1 vs. NCBI_GenBank
Match: gi|585113286|gb|EWM30614.1| (obp33pep like protein [Nannochloropsis gaditana]) HSP 1 Score: 480.715 bits (1236), Expect = 1.055e-171 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
Query: 1 MEGAVNDDSLSTKGGHLLTKPSSILSIKCMAQKPRLLLLLHHISKRQNVRTLLTSAAAFGAEVLVVGQPSFNETSHVPRRLAEALTQGENASICQPQPLYRRFHGTLEECRDQLREQNVQIWGVEIGEAAVNVEEIPWATSASKWEKEGRGGIALLLGNEGTGMSARQARVCDGFVYISQYGQGTASLNVAVAGSIVMHRFSEWAADSCQGGAEEERHVNDEFSASSVSSRGM 233
MEGAVNDDSLSTKGGHLLTKPSSILSIKCMAQKPRLLLLLHHISKRQNVRTLLTSAAAFGAEVLVVGQPSFNETSHVPRRLAEALTQGENASICQPQPLYRRFHGTLEECRDQLREQNVQIWGVEIGEAAVNVEEIPWATSASKWEKEGRGGIALLLGNEGTGMSARQARVCDGFVYISQYGQGTASLNVAVAGSIVMHRFSEWAADSCQGGAEEERHVNDEFSASSVSSRGM
Sbjct: 1 MEGAVNDDSLSTKGGHLLTKPSSILSIKCMAQKPRLLLLLHHISKRQNVRTLLTSAAAFGAEVLVVGQPSFNETSHVPRRLAEALTQGENASICQPQPLYRRFHGTLEECRDQLREQNVQIWGVEIGEAAVNVEEIPWATSASKWEKEGRGGIALLLGNEGTGMSARQARVCDGFVYISQYGQGTASLNVAVAGSIVMHRFSEWAADSCQGGAEEERHVNDEFSASSVSSRGM 233
BLAST of EWM30614.1 vs. NCBI_GenBank
Match: gi|902238215|gb|KNA25084.1| (hypothetical protein SOVF_009760 [Spinacia oleracea]) HSP 1 Score: 127.872 bits (320), Expect = 1.060e-32 Identity = 73/169 (43.20%), Postives = 100/169 (59.17%), Query Frame = 0
Query: 38 LLLHHISKRQNVRTLLTSAAAFG-AEVLVVGQPSFNETSHVPRRLAEALTQGENASICQPQPLYRRFHGTLEECRDQLREQNVQIWGVEIGEAAVNVEEIPWATSASKWEKEGRGGIALLLGNEGTGMSARQARVCDGFVYISQYGQGTASLNVAVAGSIVMHRFSEWA 205
+++H+I+KR NV TL SA AFG +E+++VG+ FN + G + S+ + +R FH +L E R+ L+E+N I GVEI AV V + P+ S A LLGNEGTG+S ++ +CD FVYI QYG GTASLNV +A SIV+H F WA
Sbjct: 18 VMVHNIAKRHNVGTLARSATAFGVSELILVGRRDFN-------------SFGNHGSVSHLR--FRHFH-SLVEARNYLKERNCDICGVEITNDAVPVNQHPFTRST-----------AFLLGNEGTGLSTKECEICDFFVYIPQYGSGTASLNVTIAASIVLHHFGAWA 159
BLAST of EWM30614.1 vs. NCBI_GenBank
Match: gi|460367226|ref|XP_004229476.1| (PREDICTED: uncharacterized protein LOC101267645 [Solanum lycopersicum]) HSP 1 Score: 127.102 bits (318), Expect = 1.225e-32 Identity = 79/184 (42.93%), Postives = 103/184 (55.98%), Query Frame = 0
Query: 32 QKPRLLLLLHHISKRQNVRTLLTSAAAFG-AEVLVVGQPSFN------ETSHVPRRLAEALTQGENASICQPQPLYRRFHGTLEECRDQLREQNVQIWGVEIGEAAVNVEEIPWATSASKWEKEGRGGIALLLGNEGTGMSARQARVCDGFVYISQYGQGTASLNVAVAGSIVMHRFSEWAADS 208
+K +L+H+I+KR NV TL SA AFG +E+++VG+ FN TSHV +R FH +L + + L+E++ I GVEI E AV V E P+ S A LLGNEGTG+SA++ +CD FVYI QYG GTASLNV VA SIV+H+F WA S
Sbjct: 5 KKLESFVLVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVR---------------------FRHFH-SLADAKTFLKERDCDICGVEITENAVAVNEHPFKRST-----------AFLLGNEGTGLSAKECEICDFFVYIPQYGCGTASLNVTVAASIVLHQFGVWAGFS 155
BLAST of EWM30614.1 vs. NCBI_GenBank
Match: gi|969996640|ref|XP_015064171.1| (PREDICTED: putative TrmH family tRNA/rRNA methyltransferase [Solanum pennellii]) HSP 1 Score: 127.102 bits (318), Expect = 1.293e-32 Identity = 79/184 (42.93%), Postives = 103/184 (55.98%), Query Frame = 0
Query: 32 QKPRLLLLLHHISKRQNVRTLLTSAAAFG-AEVLVVGQPSFN------ETSHVPRRLAEALTQGENASICQPQPLYRRFHGTLEECRDQLREQNVQIWGVEIGEAAVNVEEIPWATSASKWEKEGRGGIALLLGNEGTGMSARQARVCDGFVYISQYGQGTASLNVAVAGSIVMHRFSEWAADS 208
+K +L+H+I+KR NV TL SA AFG +E+++VG+ FN TSHV +R FH +L + + L+E++ I GVEI E AV V E P+ S A LLGNEGTG+SA++ +CD FVYI QYG GTASLNV VA SIV+H+F WA S
Sbjct: 5 KKLESFVLVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVR---------------------FRHFH-SLADAKTFLKERDCDICGVEITENAVAVNEHPFKRST-----------AFLLGNEGTGLSAKECEICDFFVYIPQYGCGTASLNVTVAASIVLHQFGVWAGFS 155
BLAST of EWM30614.1 vs. NCBI_GenBank
Match: gi|255551565|ref|XP_002516828.1| (PREDICTED: uncharacterized tRNA/rRNA methyltransferase YsgA [Ricinus communis] >gi|223543916|gb|EEF45442.1| rRNA methylase, putative [Ricinus communis]) HSP 1 Score: 126.716 bits (317), Expect = 1.389e-32 Identity = 76/172 (44.19%), Postives = 99/172 (57.56%), Query Frame = 0
Query: 38 LLLHHISKRQNVRTLLTSAAAFGA-EVLVVGQPSFNETSHVPRRLAEALTQGENASICQPQPLYRRFHGTLEECRDQLREQNVQIWGVEIGEAAVNVEEIPWATSASKWEKEGRGGIALLLGNEGTGMSARQARVCDGFVYISQYGQGTASLNVAVAGSIVMHRFSEWAADS 208
+L+H+I+KR NV TL SA AFG E+++VG+ FN G + S + +R FH +L RD L+E+ I GVEI + A+ V E P+ S A LLGNEGTG+SA++ +CD FVYI QYG+GTASLNV VA SIV+H F WA S
Sbjct: 7 VLVHNIAKRHNVGTLARSATAFGVTELILVGRRDFN-------------AFGSHGSTSHLR--FRHFH-SLLNARDYLKEKECDICGVEITDGALPVNEHPFKKST-----------AFLLGNEGTGLSAKECEICDFFVYIPQYGRGTASLNVTVAASIVLHHFGVWAGFS 151
BLAST of EWM30614.1 vs. NCBI_GenBank
Match: gi|565399477|ref|XP_006365277.1| (PREDICTED: putative TrmH family tRNA/rRNA methyltransferase [Solanum tuberosum]) HSP 1 Score: 126.716 bits (317), Expect = 1.922e-32 Identity = 78/179 (43.58%), Postives = 101/179 (56.42%), Query Frame = 0
Query: 37 LLLLHHISKRQNVRTLLTSAAAFG-AEVLVVGQPSFN------ETSHVPRRLAEALTQGENASICQPQPLYRRFHGTLEECRDQLREQNVQIWGVEIGEAAVNVEEIPWATSASKWEKEGRGGIALLLGNEGTGMSARQARVCDGFVYISQYGQGTASLNVAVAGSIVMHRFSEWAADS 208
+L+H+I+KR NV TL SA AFG +E+++VG+ FN TSHV +R FH +L + + L+E++ I GVEI E AV V E P+ S A LLGNEGTG+SA++ +CD FVYI QYG GTASLNV VA SIV+H+F WA S
Sbjct: 10 FVLVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVR---------------------FRHFH-SLADAKTFLKERDCDICGVEITENAVAVNEHPFKRST-----------AFLLGNEGTGLSAKECEICDFFVYIPQYGCGTASLNVTVAASIVLHQFGVWAGFS 155
BLAST of EWM30614.1 vs. NCBI_GenBank
Match: gi|224102553|ref|XP_002312722.1| (tRNA/rRNA methyltransferase family protein [Populus trichocarpa] >gi|118483281|gb|ABK93543.1| unknown [Populus trichocarpa] >gi|222852542|gb|EEE90089.1| tRNA/rRNA methyltransferase family protein [Populus trichocarpa]) HSP 1 Score: 125.946 bits (315), Expect = 2.974e-32 Identity = 75/178 (42.13%), Postives = 100/178 (56.18%), Query Frame = 0
Query: 38 LLLHHISKRQNVRTLLTSAAAFGA-EVLVVGQPSFNE------TSHVPRRLAEALTQGENASICQPQPLYRRFHGTLEECRDQLREQNVQIWGVEIGEAAVNVEEIPWATSASKWEKEGRGGIALLLGNEGTGMSARQARVCDGFVYISQYGQGTASLNVAVAGSIVMHRFSEWAADS 208
+++H+I+KR NV TL SA AFG E+++VG+ FN TSH+P +R FH +L + R+ L+E++ I GVEI ++A V E P+ S A LLGNEGTG+S ++ +CD FVYI QYG GTASLNV VA SIV+H F WA S
Sbjct: 7 VVVHNIAKRHNVGTLARSATAFGVKELILVGRRDFNSFGSHGSTSHLP---------------------FRHFH-SLSDARNFLKEKDCDICGVEITDSAFPVNEHPFKRST-----------AFLLGNEGTGLSTKECEICDFFVYIPQYGCGTASLNVTVAASIVLHHFGVWAGFS 151
BLAST of EWM30614.1 vs. NCBI_GenBank
Match: gi|1026018521|ref|XP_016541294.1| (PREDICTED: putative TrmH family tRNA/rRNA methyltransferase [Capsicum annuum]) HSP 1 Score: 125.946 bits (315), Expect = 3.735e-32 Identity = 78/184 (42.39%), Postives = 103/184 (55.98%), Query Frame = 0
Query: 32 QKPRLLLLLHHISKRQNVRTLLTSAAAFG-AEVLVVGQPSFN------ETSHVPRRLAEALTQGENASICQPQPLYRRFHGTLEECRDQLREQNVQIWGVEIGEAAVNVEEIPWATSASKWEKEGRGGIALLLGNEGTGMSARQARVCDGFVYISQYGQGTASLNVAVAGSIVMHRFSEWAADS 208
+K +L+H+I+KR NV TL SA AFG +E+++VG+ FN TSHV +R FH +L + + L+E++ I GVEI E AV V E P+ S A LLGNEG+G+SA++ +CD FVYI QYG GTASLNV VA SIV+H+F WA S
Sbjct: 5 KKVESFVLVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVR---------------------FRHFH-SLADAKTFLKERDCDICGVEITENAVAVNEHPFKRST-----------AFLLGNEGSGLSAKECEICDFFVYIPQYGCGTASLNVTVAASIVLHQFGVWAGFS 155
BLAST of EWM30614.1 vs. NCBI_GenBank
Match: gi|697148822|ref|XP_009628601.1| (PREDICTED: uncharacterized protein LOC104118918 [Nicotiana tomentosiformis]) HSP 1 Score: 125.561 bits (314), Expect = 4.345e-32 Identity = 78/184 (42.39%), Postives = 103/184 (55.98%), Query Frame = 0
Query: 32 QKPRLLLLLHHISKRQNVRTLLTSAAAFG-AEVLVVGQPSFN------ETSHVPRRLAEALTQGENASICQPQPLYRRFHGTLEECRDQLREQNVQIWGVEIGEAAVNVEEIPWATSASKWEKEGRGGIALLLGNEGTGMSARQARVCDGFVYISQYGQGTASLNVAVAGSIVMHRFSEWAADS 208
+K +++H+I+KR NV TL SA AFG +E+++VG+ FN TSHV +R FH +L + + L+E++ I GVEI E AV V E P+ S A LLGNEGTG+SA++ +CD FVYI QYG GTASLNV VA SIV+H+F WA S
Sbjct: 5 KKIESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVR---------------------FRHFH-SLTDAKTFLKERDCDICGVEITENAVAVNEHPFKRST-----------AFLLGNEGTGLSAKECEICDFFVYIPQYGCGTASLNVTVAASIVLHQFGVWAGFS 155
BLAST of EWM30614.1 vs. NCBI_GenBank
Match: gi|1111133427|ref|XP_019253338.1| (PREDICTED: uncharacterized protein LOC109232125 [Nicotiana attenuata] >gi|1102142158|gb|OIS98546.1| hypothetical protein A4A49_18586 [Nicotiana attenuata]) HSP 1 Score: 125.561 bits (314), Expect = 4.836e-32 Identity = 78/184 (42.39%), Postives = 103/184 (55.98%), Query Frame = 0
Query: 32 QKPRLLLLLHHISKRQNVRTLLTSAAAFG-AEVLVVGQPSFN------ETSHVPRRLAEALTQGENASICQPQPLYRRFHGTLEECRDQLREQNVQIWGVEIGEAAVNVEEIPWATSASKWEKEGRGGIALLLGNEGTGMSARQARVCDGFVYISQYGQGTASLNVAVAGSIVMHRFSEWAADS 208
+K +++H+I+KR NV TL SA AFG +E+++VG+ FN TSHV +R FH +L + + L+E++ I GVEI E AV V E P+ S A LLGNEGTG+SA++ +CD FVYI QYG GTASLNV VA SIV+H+F WA S
Sbjct: 5 KKIESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVR---------------------FRHFH-SLTDAKTFLKERDCDICGVEITENAVAVNEHPFKRST-----------AFLLGNEGTGLSAKECEICDFFVYIPQYGCGTASLNVTVAASIVLHQFGVWAGFS 155 The following BLAST results are available for this feature:
BLAST of EWM30614.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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