|
|
Properties
| Property Name | Value |
|---|
| Product | sec14 cytosolic |
| Orig transcript id | gnl|cribi|Naga_100113g14.9973.mrna |
| Orig protein id | gnl|cribi|Naga_100113g14.9973 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:497333..499925 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6786 ID=rna6786|Name=rna6786|organism=Nannochloropsis gaditana|type=mRNA|length=771bp
ATGTTGCTGACTGGTGTGCGGAGGGCCCGGGTAAATGGCAACCGGCTGCT
CGGATGGGCGGAATCGCGAATCTCTCACGCCCCTCGCTCCGTCATCGACA
CTAGCCTGACGGCATTCGCATTCGGGAGCCACAGGCACATTTCGACAAAG
CTCTTTATTCGCATCGTCCCGCATTCAACAACGCCTGAGTCCCTCCACGA
GTTTCTGCGCTCGTATGGTCCTATCCGCGAAGTCAAGATTGTCCCCCCGA
CTCGTGACGACCGCCCTCCCTTCGCTTTCGTGGAGTTTGATAACCTTAAA
TCGGCGCTTGCTGCCATGGAAGAAATGGAATTTCGGCGCCTGGAGGGCCG
GCTCATTTTCCCGACCTTCCACGTGGATCATGGGAGAAGCGGGAATCTCC
AAGGCGCGAACAGATCTGGGAAGGAGCACCGAAATCAAGGGAGGGGATTA
TCATCACGCACGCGTTTGCGTGGAGACGGAGTAAACATTTCTGTGACCGG
GCGTCACGGCCGGGACAAGAGTTTGTCCGAGCAGCAAGAGCGACAGGCAG
AGGGTGGGCCGAACGTGCAGATATCAGGGCATGACGGGGAGGAGCAGGGC
GTCTCTGGGAAAGTCGAGTCATCCGCAGCGGCGGAGGAAGACCTTGGCTT
GCGGACTGACAGCTTGGACGGCACGGCCGCGGGGAGCCATGATAGTGTCG
GGCAGTCGATAAGCGAGAGTGGATTTAAGAGGGAGGATGTATCGTACGTT
GAAACGACGACAAGAGCTTGA back to topprotein sequence of rna6786 >rna6786-protein ID=rna6786-protein|Name=rna6786|organism=Nannochloropsis gaditana|type=polypeptide|length=323bp
MPESLYASLTGYIPVMGDATSEQLPSGGAAGAMSSRSPSLVSHSSRATTK
DAQADEDSPMPSLLRRISNSIQFKRKGSHLPLPSADEIPANFLASCKGNV
EKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNC
ISVEIPGSMNVKLMKSAKLSPRDMALHLALVQEYVWTVLTPGDDRKIVTL
MDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPI
FRLLSTVMPASVRDQFQICSSPADVEKFISPDVLPVEYGGKNSLKFGQSE
EEVSLRALVDRNNAEGGDRQMDK back to topmRNA from alignment at CM002469.1:497333..499925+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6786 ID=rna6786|Name=rna6786|organism=Nannochloropsis gaditana|type=mRNA|length=2593bp|location=Sequence derived from alignment at CM002469.1:497333..499925+ (Nannochloropsis gaditana)
GATGGATACCATGCTATTAATTCTTTCAATATGTCTAGCTTAATAATTAG
AGGCATTCTGTGCTGTCATGGCGTTATCACGCTGGTCTCCGCTCCTTTTT
GGGGGAGAACGAAGTGTTGTAAAGGTCACCTTCTTGCAAGTGTTACAGAG
CGTGTGCCTAACCCTGTTTCAGCCAAAGACACGCATGGCTCTCTGTCCAT
CATTCGATTCCATTCCACCTTAAAATATGCCTGAGAGTTTACACGCATCT
CTCACAGGATACACCTTCTTGCAAGTGTTACAGAGCGTGTGCCTAACCCT
GTTTCAGCCAAAGACACGCATGGCTCTCTGTCCATCATTCGATTCCATTC
TACCTTAAAATATGCCTGAGAGTTTATACGCATCTCTCACAGGATACATA
CCGGTCATGGGCGACGCCACTTCCGAGCAGCTTCCCTCGGGTGGCGCTGC
CGGTGCGATGAGTAGCCGGAGCCCCAGTCTCGTGTCACATTCGTCTCGCG
CAACTACTAAAGACGCTCAGGCAGACGAGGATTCTCCCATGCCTAGCTTG
TTGAGACGTATCTCAAACTCTATCCAGTTTAAGCGCAAAGGCTCTCATCT
ACCGTTGCCATGTAAGAGGACTTGAAGAAATTGGCGAAACATCAGATGCG
ATGGCATCACGCTGTAATCGGACTCGATGACAAGCGAATTTTGTATTTTC
ACTATCTCAATTTGGTTGATtgcttgccctctcctcctcccctgtgTCTG
gaaattttccttctttggTCATGACAGCGGCCGACGAGATTCCAGCGAAT
TTCTTGGCCTCCTGTAAAGGAAACGTGGAAAAGGCGGGGCGGAAATGGCA
GGTCTCGAAGCagtggcgggaggaaaatgacatCGGTACGTGATGGAGGG
GTAGGCATGCGGCTGTAACCTACACGCATTAAACCCAGAGGCATGCTCGT
CCGTTCTGCTTTGCCGTGTCTGGGCCCCCGCCCATGCTCGCTATCTGGCC
TTAGTGCCCTCACCCACACCTCCTGTGCCTGCCTTCATGCAGACCACATT
CTGCAGCGTCCGCATCCACACTACGAGACCCTGAAAACCGTCTATCCTGC
TTTTTTGCACGGGCGCGATCTACAGGGAAACTGTATTTCTGTTGAAATAC
CCGGtaagggggacgggggagggacggagggggggagaccGTGAGACATG
TGCAGGTCGCACAGAGCGAGCGAGTAGTGACCAAGCAAATGGCGCAAGAC
CTGCATGCAATGCCGCCAAGCTTGGGGCTTGCCACGTGTGCTGCGGAAAA
ACTTCTGACGTGGGCACCGCTCCTTCCCAGGCTCGATGAACGTGAAACTT
ATGAAGTCGGCCAAGTTGAGCCCGCGAGACATGGCCCTGCACTTAGCGTT
GGTCCAGGAGTACGTCTGGACGGTGCTTACGCCGGGGGACGACAGAAAGG
TACGGTGGAGATACTTGAggtcaagaagaaggaaacccTGCGGAAACCCT
GCGTGTATTTAACCCGACCGGTCCCTGTGGCAATAGATAGTGACCTTGAT
GGACGCGAAGGGTCTTTCCTTGACGCGGCTGGCGTCTCCGGATAGCTTGG
CGCTGATACGCGCGGCCTCTGAGGTAGGTTGGAGGCTcgtgtgggagggg
gggacgtcaggaagggaaggtaggCGGACGAGTACTCAGGATTGCAAAGA
AGTGcattgaagagggaggataagCCAGACGCACGCTAGGACATTGGTGG
AGTTTCCAAGAATGGTTTGAATCGGCGGCCGACATGTATAAAGCTCTCTG
cggtctctccttcccctcgttctCTGCCACGCGCCCTTTTCCACAGACCC
TAAATAATCATTATCCTGACCGAGTGCTCCGAATTCTTGTAGTCAATGCC
CCTCGGTAAGATCGTGCTCAGGTTCTCGCTTGATACGTGGCGGCTTCTTT
TTGTCTGTGAATGCAAAAAAAGTGCAATCTCTTACGCATTTTCCgatgcc
cttttcctcttcttccacttccattGGTGTGCACAGGTTTTTTGGTCCGA
TTTTCAGGCTTCTGTCTACTGTAATGCCCGCGTCAGTACGAGACCAATTC
CAAATTTGCTCCTCACCAGCAGATGTCGAAAAATTTATTTCCCCAGATGT
CCTTCCCGTAGAGTATGGAGGCAAGAATTCACTTAAATTCGGACAatctg
aggaggaggtaagtTTGCGGGCACTTGTGGACAGAAACAACGCGGAAGGT
GGGGACAGGCAGATGGATAAATGAAGTTACTGACAGAGATGCTATCTACT
AGAGGACATGGAGATGAGGCACGTCCCATAAAGAAATACTTTGTATTCCA
AATGAAAgtcatttcattttttttacCTTTTTCATAAAGGTTTAATTTCC
TCAGTAAGGTGTATTTTTCCATGGTGACCCCCTCGATAACAGTGAAGAAA
CCACAGGCATGGCCATGTAGGGCGTCTACTCGGAACGTACCGTACACAAA
ATCGTCATTGTCCTTCGAGGCATTCTTTCCATGATCCAGATTCAAAGATC
GCCATGCTCCCAAGCTTCACAAATCACATTGAAAAACACGTac back to topCoding sequence (CDS) from alignment at CM002469.1:497333..499925+ >rna6786 ID=rna6786|Name=rna6786|organism=Nannochloropsis gaditana|type=CDS|length=6804bp|location=Sequence derived from alignment at CM002469.1:497333..499925+ (Nannochloropsis gaditana)
ATGCCTGAGAGTTTATACGCATCTCTCACAGGATACATACCGGTCATGGG
CGACGCCACTTCCGAGCAGCTTCCCTCGGGTGGCGCTGCCGGTGCGATGA
GTAGCCGGAGCCCCAGTCTCGTGTCACATTCGTCTCGCGCAACTACTAAA
GACGCTCAGGCAGACGAGGATTCTCCCATGCCTAGCTTGTTGAGACGTAT
CTCAAACTCTATCCAGTTTAAGCGCAAAGGCTCTCATCTACCGTTGCCAT
CGGCCGACGAGATTCCAGCGAATTTCTTGGCCTCCTGTAAAGGAAACGTG
GAAAAGGCGGGGCGGAAATGGCAGGTCTCGAAGCagtggcgggaggaaaa
tgacatCGACCACATTCTGCAGCGTCCGCATCCACACTACGAGACCCTGA
AAACCGTCTATCCTGCTTTTTTGCACGGGCGCGATCTACAGGGAAACTGT
ATTTCTGTTGAAATACCCGGCTCGATGAACGTGAAACTTATGAAGTCGGC
CAAGTTGAGCCCGCGAGACATGGCCCTGCACTTAGCGTTGGTCCAGGAGT
ACGTCTGGACGGTGCTTACGCCGGGGGACGACAGAAAGATAGTGACCTTG
ATGGACGCGAAGGGTCTTTCCTTGACGCGGCTGGCGTCTCCGGATAGCTT
GGCGCTGATACGCGCGGCCTCTGAGACCCTAAATAATCATTATCCTGACC
GAGTGCTCCGAATTCTTGTAGTCAATGCCCCTCGGTTTTTTGGTCCGATT
TTCAGGCTTCTGTCTACTGTAATGCCCGCGTCAGTACGAGACCAATTCCA
AATTTGCTCCTCACCAGCAGATGTCGAAAAATTTATTTCCCCAGATGTCC
TTCCCGTAGAGTATGGAGGCAAGAATTCACTTAAATTCGGACAatctgag
gaggaggtaagtTTGCGGGCACTTGTGGACAGAAACAACGCGGAAGGTGG
GGACAGGCAGATGGATAAATGAATGCCTGAGAGTTTATACGCATCTCTCA
CAGGATACATACCGGTCATGGGCGACGCCACTTCCGAGCAGCTTCCCTCG
GGTGGCGCTGCCGGTGCGATGAGTAGCCGGAGCCCCAGTCTCGTGTCACA
TTCGTCTCGCGCAACTACTAAAGACGCTCAGGCAGACGAGGATTCTCCCA
TGCCTAGCTTGTTGAGACGTATCTCAAACTCTATCCAGTTTAAGCGCAAA
GGCTCTCATCTACCGTTGCCATCGGCCGACGAGATTCCAGCGAATTTCTT
GGCCTCCTGTAAAGGAAACGTGGAAAAGGCGGGGCGGAAATGGCAGGTCT
CGAAGCagtggcgggaggaaaatgacatCGACCACATTCTGCAGCGTCCG
CATCCACACTACGAGACCCTGAAAACCGTCTATCCTGCTTTTTTGCACGG
GCGCGATCTACAGGGAAACTGTATTTCTGTTGAAATACCCGGCTCGATGA
ACGTGAAACTTATGAAGTCGGCCAAGTTGAGCCCGCGAGACATGGCCCTG
CACTTAGCGTTGGTCCAGGAGTACGTCTGGACGGTGCTTACGCCGGGGGA
CGACAGAAAGATAGTGACCTTGATGGACGCGAAGGGTCTTTCCTTGACGC
GGCTGGCGTCTCCGGATAGCTTGGCGCTGATACGCGCGGCCTCTGAGACC
CTAAATAATCATTATCCTGACCGAGTGCTCCGAATTCTTGTAGTCAATGC
CCCTCGGTTTTTTGGTCCGATTTTCAGGCTTCTGTCTACTGTAATGCCCG
CGTCAGTACGAGACCAATTCCAAATTTGCTCCTCACCAGCAGATGTCGAA
AAATTTATTTCCCCAGATGTCCTTCCCGTAGAGTATGGAGGCAAGAATTC
ACTTAAATTCGGACAatctgaggaggaggtaagtTTGCGGGCACTTGTGG
ACAGAAACAACGCGGAAGGTGGGGACAGGCAGATGGATAAATGAATGCCT
GAGAGTTTATACGCATCTCTCACAGGATACATACCGGTCATGGGCGACGC
CACTTCCGAGCAGCTTCCCTCGGGTGGCGCTGCCGGTGCGATGAGTAGCC
GGAGCCCCAGTCTCGTGTCACATTCGTCTCGCGCAACTACTAAAGACGCT
CAGGCAGACGAGGATTCTCCCATGCCTAGCTTGTTGAGACGTATCTCAAA
CTCTATCCAGTTTAAGCGCAAAGGCTCTCATCTACCGTTGCCATCGGCCG
ACGAGATTCCAGCGAATTTCTTGGCCTCCTGTAAAGGAAACGTGGAAAAG
GCGGGGCGGAAATGGCAGGTCTCGAAGCagtggcgggaggaaaatgacat
CGACCACATTCTGCAGCGTCCGCATCCACACTACGAGACCCTGAAAACCG
TCTATCCTGCTTTTTTGCACGGGCGCGATCTACAGGGAAACTGTATTTCT
GTTGAAATACCCGGCTCGATGAACGTGAAACTTATGAAGTCGGCCAAGTT
GAGCCCGCGAGACATGGCCCTGCACTTAGCGTTGGTCCAGGAGTACGTCT
GGACGGTGCTTACGCCGGGGGACGACAGAAAGATAGTGACCTTGATGGAC
GCGAAGGGTCTTTCCTTGACGCGGCTGGCGTCTCCGGATAGCTTGGCGCT
GATACGCGCGGCCTCTGAGACCCTAAATAATCATTATCCTGACCGAGTGC
TCCGAATTCTTGTAGTCAATGCCCCTCGGTTTTTTGGTCCGATTTTCAGG
CTTCTGTCTACTGTAATGCCCGCGTCAGTACGAGACCAATTCCAAATTTG
CTCCTCACCAGCAGATGTCGAAAAATTTATTTCCCCAGATGTCCTTCCCG
TAGAGTATGGAGGCAAGAATTCACTTAAATTCGGACAatctgaggaggag
gtaagtTTGCGGGCACTTGTGGACAGAAACAACGCGGAAGGTGGGGACAG
GCAGATGGATAAATGAATGCCTGAGAGTTTATACGCATCTCTCACAGGAT
ACATACCGGTCATGGGCGACGCCACTTCCGAGCAGCTTCCCTCGGGTGGC
GCTGCCGGTGCGATGAGTAGCCGGAGCCCCAGTCTCGTGTCACATTCGTC
TCGCGCAACTACTAAAGACGCTCAGGCAGACGAGGATTCTCCCATGCCTA
GCTTGTTGAGACGTATCTCAAACTCTATCCAGTTTAAGCGCAAAGGCTCT
CATCTACCGTTGCCATCGGCCGACGAGATTCCAGCGAATTTCTTGGCCTC
CTGTAAAGGAAACGTGGAAAAGGCGGGGCGGAAATGGCAGGTCTCGAAGC
agtggcgggaggaaaatgacatCGACCACATTCTGCAGCGTCCGCATCCA
CACTACGAGACCCTGAAAACCGTCTATCCTGCTTTTTTGCACGGGCGCGA
TCTACAGGGAAACTGTATTTCTGTTGAAATACCCGGCTCGATGAACGTGA
AACTTATGAAGTCGGCCAAGTTGAGCCCGCGAGACATGGCCCTGCACTTA
GCGTTGGTCCAGGAGTACGTCTGGACGGTGCTTACGCCGGGGGACGACAG
AAAGATAGTGACCTTGATGGACGCGAAGGGTCTTTCCTTGACGCGGCTGG
CGTCTCCGGATAGCTTGGCGCTGATACGCGCGGCCTCTGAGACCCTAAAT
AATCATTATCCTGACCGAGTGCTCCGAATTCTTGTAGTCAATGCCCCTCG
GTTTTTTGGTCCGATTTTCAGGCTTCTGTCTACTGTAATGCCCGCGTCAG
TACGAGACCAATTCCAAATTTGCTCCTCACCAGCAGATGTCGAAAAATTT
ATTTCCCCAGATGTCCTTCCCGTAGAGTATGGAGGCAAGAATTCACTTAA
ATTCGGACAatctgaggaggaggtaagtTTGCGGGCACTTGTGGACAGAA
ACAACGCGGAAGGTGGGGACAGGCAGATGGATAAATGAATGCCTGAGAGT
TTATACGCATCTCTCACAGGATACATACCGGTCATGGGCGACGCCACTTC
CGAGCAGCTTCCCTCGGGTGGCGCTGCCGGTGCGATGAGTAGCCGGAGCC
CCAGTCTCGTGTCACATTCGTCTCGCGCAACTACTAAAGACGCTCAGGCA
GACGAGGATTCTCCCATGCCTAGCTTGTTGAGACGTATCTCAAACTCTAT
CCAGTTTAAGCGCAAAGGCTCTCATCTACCGTTGCCATCGGCCGACGAGA
TTCCAGCGAATTTCTTGGCCTCCTGTAAAGGAAACGTGGAAAAGGCGGGG
CGGAAATGGCAGGTCTCGAAGCagtggcgggaggaaaatgacatCGACCA
CATTCTGCAGCGTCCGCATCCACACTACGAGACCCTGAAAACCGTCTATC
CTGCTTTTTTGCACGGGCGCGATCTACAGGGAAACTGTATTTCTGTTGAA
ATACCCGGCTCGATGAACGTGAAACTTATGAAGTCGGCCAAGTTGAGCCC
GCGAGACATGGCCCTGCACTTAGCGTTGGTCCAGGAGTACGTCTGGACGG
TGCTTACGCCGGGGGACGACAGAAAGATAGTGACCTTGATGGACGCGAAG
GGTCTTTCCTTGACGCGGCTGGCGTCTCCGGATAGCTTGGCGCTGATACG
CGCGGCCTCTGAGACCCTAAATAATCATTATCCTGACCGAGTGCTCCGAA
TTCTTGTAGTCAATGCCCCTCGGTTTTTTGGTCCGATTTTCAGGCTTCTG
TCTACTGTAATGCCCGCGTCAGTACGAGACCAATTCCAAATTTGCTCCTC
ACCAGCAGATGTCGAAAAATTTATTTCCCCAGATGTCCTTCCCGTAGAGT
ATGGAGGCAAGAATTCACTTAAATTCGGACAatctgaggaggaggtaagt
TTGCGGGCACTTGTGGACAGAAACAACGCGGAAGGTGGGGACAGGCAGAT
GGATAAATGAATGCCTGAGAGTTTATACGCATCTCTCACAGGATACATAC
CGGTCATGGGCGACGCCACTTCCGAGCAGCTTCCCTCGGGTGGCGCTGCC
GGTGCGATGAGTAGCCGGAGCCCCAGTCTCGTGTCACATTCGTCTCGCGC
AACTACTAAAGACGCTCAGGCAGACGAGGATTCTCCCATGCCTAGCTTGT
TGAGACGTATCTCAAACTCTATCCAGTTTAAGCGCAAAGGCTCTCATCTA
CCGTTGCCATCGGCCGACGAGATTCCAGCGAATTTCTTGGCCTCCTGTAA
AGGAAACGTGGAAAAGGCGGGGCGGAAATGGCAGGTCTCGAAGCagtggc
gggaggaaaatgacatCGACCACATTCTGCAGCGTCCGCATCCACACTAC
GAGACCCTGAAAACCGTCTATCCTGCTTTTTTGCACGGGCGCGATCTACA
GGGAAACTGTATTTCTGTTGAAATACCCGGCTCGATGAACGTGAAACTTA
TGAAGTCGGCCAAGTTGAGCCCGCGAGACATGGCCCTGCACTTAGCGTTG
GTCCAGGAGTACGTCTGGACGGTGCTTACGCCGGGGGACGACAGAAAGAT
AGTGACCTTGATGGACGCGAAGGGTCTTTCCTTGACGCGGCTGGCGTCTC
CGGATAGCTTGGCGCTGATACGCGCGGCCTCTGAGACCCTAAATAATCAT
TATCCTGACCGAGTGCTCCGAATTCTTGTAGTCAATGCCCCTCGGTTTTT
TGGTCCGATTTTCAGGCTTCTGTCTACTGTAATGCCCGCGTCAGTACGAG
ACCAATTCCAAATTTGCTCCTCACCAGCAGATGTCGAAAAATTTATTTCC
CCAGATGTCCTTCCCGTAGAGTATGGAGGCAAGAATTCACTTAAATTCGG
ACAatctgaggaggaggtaagtTTGCGGGCACTTGTGGACAGAAACAACG
CGGAAGGTGGGGACAGGCAGATGGATAAATGAATGCCTGAGAGTTTATAC
GCATCTCTCACAGGATACATACCGGTCATGGGCGACGCCACTTCCGAGCA
GCTTCCCTCGGGTGGCGCTGCCGGTGCGATGAGTAGCCGGAGCCCCAGTC
TCGTGTCACATTCGTCTCGCGCAACTACTAAAGACGCTCAGGCAGACGAG
GATTCTCCCATGCCTAGCTTGTTGAGACGTATCTCAAACTCTATCCAGTT
TAAGCGCAAAGGCTCTCATCTACCGTTGCCATCGGCCGACGAGATTCCAG
CGAATTTCTTGGCCTCCTGTAAAGGAAACGTGGAAAAGGCGGGGCGGAAA
TGGCAGGTCTCGAAGCagtggcgggaggaaaatgacatCGACCACATTCT
GCAGCGTCCGCATCCACACTACGAGACCCTGAAAACCGTCTATCCTGCTT
TTTTGCACGGGCGCGATCTACAGGGAAACTGTATTTCTGTTGAAATACCC
GGCTCGATGAACGTGAAACTTATGAAGTCGGCCAAGTTGAGCCCGCGAGA
CATGGCCCTGCACTTAGCGTTGGTCCAGGAGTACGTCTGGACGGTGCTTA
CGCCGGGGGACGACAGAAAGATAGTGACCTTGATGGACGCGAAGGGTCTT
TCCTTGACGCGGCTGGCGTCTCCGGATAGCTTGGCGCTGATACGCGCGGC
CTCTGAGACCCTAAATAATCATTATCCTGACCGAGTGCTCCGAATTCTTG
TAGTCAATGCCCCTCGGTTTTTTGGTCCGATTTTCAGGCTTCTGTCTACT
GTAATGCCCGCGTCAGTACGAGACCAATTCCAAATTTGCTCCTCACCAGC
AGATGTCGAAAAATTTATTTCCCCAGATGTCCTTCCCGTAGAGTATGGAG
GCAAGAATTCACTTAAATTCGGACAatctgaggaggaggtaagtTTGCGG
GCACTTGTGGACAGAAACAACGCGGAAGGTGGGGACAGGCAGATGGATAA
ATGA back to top
|