EWM23907.1, cds6770 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23907.1 vs. NCBI_GenBank
Match: gi|585105189|gb|EWM23907.1| (sec14 cytosolic [Nannochloropsis gaditana]) HSP 1 Score: 667.537 bits (1721), Expect = 0.000e+0 Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0
Query: 1 MPESLYASLTGYIPVMGDATSEQLPSGGAAGAMSSRSPSLVSHSSRATTKDAQADEDSPMPSLLRRISNSIQFKRKGSHLPLPSADEIPANFLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMNVKLMKSAKLSPRDMALHLALVQEYVWTVLTPGDDRKIVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPADVEKFISPDVLPVEYGGKNSLKFGQSEEEVSLRALVDRNNAEGGDRQMDK 323
MPESLYASLTGYIPVMGDATSEQLPSGGAAGAMSSRSPSLVSHSSRATTKDAQADEDSPMPSLLRRISNSIQFKRKGSHLPLPSADEIPANFLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMNVKLMKSAKLSPRDMALHLALVQEYVWTVLTPGDDRKIVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPADVEKFISPDVLPVEYGGKNSLKFGQSEEEVSLRALVDRNNAEGGDRQMDK
Sbjct: 1 MPESLYASLTGYIPVMGDATSEQLPSGGAAGAMSSRSPSLVSHSSRATTKDAQADEDSPMPSLLRRISNSIQFKRKGSHLPLPSADEIPANFLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMNVKLMKSAKLSPRDMALHLALVQEYVWTVLTPGDDRKIVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPADVEKFISPDVLPVEYGGKNSLKFGQSEEEVSLRALVDRNNAEGGDRQMDK 323
BLAST of EWM23907.1 vs. NCBI_GenBank
Match: gi|673013740|ref|XP_008860831.1| (hypothetical protein H310_00028 [Aphanomyces invadans] >gi|574482429|gb|ETW09420.1| hypothetical protein H310_00028 [Aphanomyces invadans]) HSP 1 Score: 176.407 bits (446), Expect = 2.409e-46 Identity = 83/229 (36.24%), Postives = 142/229 (62.01%), Query Frame = 0
Query: 92 FLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMNVKLMKSAKLSPRDMALHLALVQEYVWTVLTPGDDRKIVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPA---DVEKFISPDVLPVEYGGKNSLKFGQSEEEVSLRALVDRNNAEGG 317
F+A+ KGNVEK +++ + QWR EN++D +LQ P PH+ +K YP + HG+ ++G+C+ E G +++K MK+A L+ + H + EY+WT+L P D + VT++D G+ LA D L +R A+ ++ +YP+R +I +VN P +F ++ ++S ++ +++ +IC A ++ K I+ D LP +YGG +S+K G+S+EEV+L VD+ A G
Sbjct: 478 FIAAEKGNVEKGRARYESTLQWRRENNVDGMLQEPQPHFHLIKKYYPQYFHGKSIKGHCVYYEKVGKIDLKAMKAAGLTIDQLLRHYVYLTEYMWTILEPSDSGRSVTVLDVNGIGFYDLAG-DVLLFVRQATGFVSANYPERSAQIFIVNVPTWFNMVWSVVSPMIDPVTKEKIRICKGRAVKEELLKSIAEDQLPADYGG-SSVKLGESDEEVALAKYVDQALAASG 704
BLAST of EWM23907.1 vs. NCBI_GenBank
Match: gi|698793962|ref|XP_009830010.1| (hypothetical protein H257_06483 [Aphanomyces astaci] >gi|574114599|gb|ETV80086.1| hypothetical protein H257_06483 [Aphanomyces astaci]) HSP 1 Score: 168.703 bits (426), Expect = 1.690e-43 Identity = 80/222 (36.04%), Postives = 135/222 (60.81%), Query Frame = 0
Query: 92 FLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMNVKLMKSAKLSPRDMALHLALVQEYVWTVLTPGDDRKIVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPA---DVEKFISPDVLPVEYGGKNSLKFGQSEEEVSLRALVD 310
F+A+ KGNV+K +++ + QWR EN +D +L P PH+ +K YP + HG+ ++G+C+ E G +++K MK+A L+ + H + EY+WT+L P D + VT++D +G+ L D + +R A ++ HYP+R +I +VN PR+F ++R++S ++ +++ +IC A ++ K I+ D LPV+YGG +K G S EEV+L VD
Sbjct: 483 FIAAEKGNVDKGRVRYENTLQWRRENRVDGMLHIPQPHFHLIKKNYPQYFHGQSIKGHCVYYEKVGKIDLKAMKAAGLTIEQLLRHYIYLTEYMWTILEPSDSGRSVTVLDVEGIGFYDLTG-DVMDFVRQAMGFVSAHYPERSAQIFIVNVPRWFDVVWRVVSPMIEPVTKEKIRICKGRAVKEELLKSIAEDQLPVDYGG-TGVKLGLSAEEVALAKHVD 702
BLAST of EWM23907.1 vs. NCBI_GenBank
Match: gi|299469886|emb|CBN76740.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 159.458 bits (402), Expect = 6.072e-40 Identity = 79/231 (34.20%), Postives = 137/231 (59.31%), Query Frame = 0
Query: 87 EIPANFLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMNVKLMKSAKLSPRDMALHLALVQEYVWTVLTPG-DDRKIVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPADVEKF-------ISPDVLPVEYGGKNSLKFGQSEEEVSLRALV 309
+IP +L C G+ +A R+W+++ +WR + ID +L+ P PH+E +K YP ++H R G + +E+PG +++ ++SA +SP + H V EY+W VL P ++ + VT++D +GL + LA ++L ++ A+ + +HY +R R+ +VNAP +F I+R++ ++ + R Q +I D +K I+P+ LP +YGG L G+SEEE+ LR V
Sbjct: 302 DIPGRYLRGCAGDPVEAERRWRLTLEWRAKERIDEVLREPQPHFELIKRHYPHYIHRRARNGCPVWIELPGRIDLPAIRSAGVSPEALQRHYVFVTEYMWGVLEPDFENGQAVTVLDVQGLGMRDLAG-EALGFVKQATAIVQDHYVERSNRMFIVNAPSYFSLIWRVIRPML--NERTQAKIGIINTDAKKIAAALLECIAPENLPRQYGGTCPLDLGESEEELDLRTYV 529
BLAST of EWM23907.1 vs. NCBI_GenBank
Match: gi|1214702632|gb|OWZ14787.1| (SEC14 cytosolic factor [Phytophthora megakarya]) HSP 1 Score: 152.525 bits (384), Expect = 9.114e-38 Identity = 75/223 (33.63%), Postives = 127/223 (56.95%), Query Frame = 0
Query: 92 FLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMNVKLMKSAKLSPRDMALHLALVQEYVWTVLTPGDDRKIVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPA---DVEKFISPDVLPVEYGGKNSLKFGQSEEEVSLRALVDR 311
F+A KG+ EK ++ + +WR+ENDID+IL PHP++ET+K YP + HGR +G + E PG + + +K LS D+ H + EY+W V+ P D + +T++D G+ + L + L I+ AS HYP+R I ++N P +F I+R++ ++ R++ + A ++E I P+ +P ++GG+ + G SEEE +L A V++
Sbjct: 485 FIAGEKGDAEKGHARFLATLEWRKENDIDNILVTPHPNFETIKQYYPQYFHGRTREGQPVYYERPGKIQLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDSGRSITVLDVTGIGMYDLGG-EVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPLIDPVTREKVHMLKGSAILKELETLIDPENIPSDFGGEG-VALGDSEEEHALAAHVNK 705
BLAST of EWM23907.1 vs. NCBI_GenBank
Match: gi|325190291|emb|CCA24767.1| (SEC14 cytosolic factor putative [Albugo laibachii Nc14]) HSP 1 Score: 150.599 bits (379), Expect = 3.503e-37 Identity = 75/234 (32.05%), Postives = 132/234 (56.41%), Query Frame = 0
Query: 84 SADEIPAN--FLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMNVKLMKSAKLSPRDMALHLALVQEYVWTVLTPGDDRKIVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPA----DVEKFISPDVLPVEYGGKNSLKFGQSEEEVSLRALVDR 311
S IP + F+A+ KGN E+ ++ + WR+END+D IL+RPH ++E +K YP + HGR GN + E PG +++ ++K LS D+ H + E++WT + P D + +T++D G+ ++ L + L I+ AS HYP+R I ++N P +F I+R++ ++ R++ + ++++ I D +P EYGG+ + G S EE +LR+ V++
Sbjct: 447 SGKSIPFSPRFIAAEKGNEERGKERYLQTLSWRKENDVDQILRRPHRNFENIKKCYPQYFHGRSKAGNPVYYEKPGKIDLLVLKQLGLSIEDLIYHYMYITEFLWTYIEPDDAARSITVLDVSGIGMSSLGG-EVLDFIKRASTFTAAHYPERSAHIFIINIPGWFNMIWRIVKPLIDPVTREKVHMLKGRGSILRELKQLIDIDQIPEEYGGQGA-PLGMSAEENTLRSHVNK 678
BLAST of EWM23907.1 vs. NCBI_GenBank
Match: gi|673013738|ref|XP_008860830.1| (hypothetical protein H310_00027 [Aphanomyces invadans] >gi|574482428|gb|ETW09419.1| hypothetical protein H310_00027 [Aphanomyces invadans]) HSP 1 Score: 142.51 bits (358), Expect = 4.511e-37 Identity = 75/229 (32.75%), Postives = 122/229 (53.28%), Query Frame = 0
Query: 87 EIPAN--FLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMNVKLMKSAKLSPRDMALHLALVQEYVWTVLTPGDDRKIVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPADVEKF---ISPDVLPVEYGGKNSLKFGQSEEEVSLRALVD 310
EIP + F+A+ KGN EK ++++ + WR +N ID ++ P H+ +K YP + HG+ G+ + E GS+N K +K + LS + H + EY+W VL P D+ + +T+ D + L + D + IR A HYP+R +I V+N P +F +R +S ++ + + ++C+S A E+ I D LP YGG S G+S+EE L V+
Sbjct: 22 EIPFSPRFIAAEKGNAEKGRQRYESTLSWRRDNRIDTLIDEPQVHFHLIKKNYPQYFHGKSKNGHRVYYEKLGSVNFKALKKSGLSMDQLLRHYMYITEYLWKVLDPSDNGRSITVFDVENFGFYDL-TGDVTSFIRQAMAFAGEHYPERSAQIYVINVPAWFHITYRAMSAMIDPVTKAKIRVCTSGAATEELLASIDADQLPSNYGG-TSCALGESDEEKMLAKHVN 248
BLAST of EWM23907.1 vs. NCBI_GenBank
Match: gi|669150394|ref|XP_008610759.1| (hypothetical protein SDRG_06737 [Saprolegnia diclina VS20] >gi|530737755|gb|EQC35997.1| hypothetical protein SDRG_06737 [Saprolegnia diclina VS20]) HSP 1 Score: 148.288 bits (373), Expect = 2.590e-36 Identity = 75/223 (33.63%), Postives = 125/223 (56.05%), Query Frame = 0
Query: 92 FLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMNVKLMKSAKLSPRDMALHLALVQEYVWTVLTPGDDRKIVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPADVEKFI-SPDV--LPVEYGGKNSLKFGQSEEEVSLRALVDR 311
FLA+ KG+ K +++ + QWR EN +D IL PH+ +K YP + HGR GNC+ E G +++K +KSA LS + H + EY+W +L P D + ++++DA+G+ L + + +R A ++ HYP+R +I +VN P +F I++ +S ++ +++ +IC E+ + S D+ LP +YGG G S EE +L A VD+
Sbjct: 478 FLAAEKGDEAKGRARYEATLQWRRENHVDGILYEVQPHFHLIKQCYPQYFHGRSKNGNCVYYEKLGKIDLKRLKSAGLSLDQLLRHYMYITEYLWLILEPSDTGRTISVLDAEGVGFYDLTG-EVMEFVRRAMAFVSAHYPERSAQIFIVNVPTWFNVIWKGISPLVDPVTKEKIRICKGKMVKEELLKSIDIAELPADYGGDGP-ALGGSAEEKALAAYVDQ 698
BLAST of EWM23907.1 vs. NCBI_GenBank
Match: gi|813142080|ref|XP_012199172.1| (hypothetical protein SPRG_05178 [Saprolegnia parasitica CBS 223.65] >gi|641536093|gb|KDO29989.1| hypothetical protein SPRG_05178 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 148.288 bits (373), Expect = 3.054e-36 Identity = 76/224 (33.93%), Postives = 126/224 (56.25%), Query Frame = 0
Query: 91 NFLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMNVKLMKSAKLSPRDMALHLALVQEYVWTVLTPGDDRKIVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPADVEKFI-SPDV--LPVEYGGKNSLKFGQSEEEVSLRALVDR 311
F+A+ KG+ K +++ + QWR EN +D IL PH+ +K YP + HGR GNC+ E G +++K +KSA LS + H + EY+W VL P D + ++++DA+G+ L + + +R A ++ HYP+R +I +VN P +F I++ +S ++ +++ +IC E+ + S DV LP +YGG G+S EE +L A VD+
Sbjct: 469 RFVAAEKGDEVKGRARYEATLQWRRENHVDGILYEVQPHFHLIKQCYPQYFHGRSKNGNCVYYEKLGKIDLKRLKSAGLSLDQLLRHYMYITEYLWLVLEPSDTGRTISVLDAEGVGFYDLTG-EVMEFVRRAMAFVSAHYPERSAQIFIVNVPTWFNVIWKGISPLVDPVTKEKIRICKGKMVKEELLKSIDVAELPSDYGGDGP-ALGESAEEKALAAYVDQ 690
BLAST of EWM23907.1 vs. NCBI_GenBank
Match: gi|1173952951|gb|OQS00525.1| (serine protease family S09A [Thraustotheca clavata]) HSP 1 Score: 148.288 bits (373), Expect = 4.897e-36 Identity = 81/254 (31.89%), Postives = 139/254 (54.72%), Query Frame = 0
Query: 86 DEIPANFLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMN--VKLMKSAKLSPRDMALHLALVQEYVWTVLTPGDDRK------IVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPADVEK----FISPDVLPVEYGGKNSLKFG---QSEEEVSLRALVDR-NNAEGGDRQMDK 323
+++ F+ +C ++E+A RK+ QWR+ENDIDHILQRPHPH++ +K Y H D G+ IS+E+ GSM ++ S + D+ HL E++W V+ DR+ ++ ++D G+SLT D ++ ++ S +YP+R+ ++ +VN P +F I++ +S ++ RD+ + +++K +I + LPVEYGG + + G S EV LR V+R N+ E +D+
Sbjct: 432 EDVDPRFIVACNDDMEEAKRKFTKYLQWRKENDIDHILQRPHPHFKVIKESYIHLTHKEDKNGHIISIELAGSMKKGMQHFLSLGVVETDVVYHLGFYNEFLWNVI----DRRPLPLGTMLKIVDMNGVSLTDFGG-DVVSFMKQCSSVGELYYPERLYKVFIVNPPSWFNIIWKAMSPLINPKTRDKINVVKGQKEIQKALLEYIDAENLPVEYGGTCACEGGCLTHSPHEVLLRDYVERLNSGEDCTAYLDR 680 The following BLAST results are available for this feature:
BLAST of EWM23907.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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