EWM23907.1, cds6770 (CDS) Nannochloropsis gaditana

Overview
NameEWM23907.1
Unique Namecds6770
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:497694..497943 +
Alignment locationCM002469.1:498110..498217 +
Alignment locationCM002469.1:498375..498485 +
Alignment locationCM002469.1:498663..498781 +
Alignment locationCM002469.1:498869..498955 +
Alignment locationCM002469.1:499179..499237 +
Alignment locationCM002469.1:499369..499606 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23907.1
Productsec14 cytosolic
Orig transcript idgnl|cribi|Naga_100113g14.9973.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:497694..497943 +
CM002469.1supercontigCM002469.1:498110..498217 +
CM002469.1supercontigCM002469.1:498375..498485 +
CM002469.1supercontigCM002469.1:498663..498781 +
CM002469.1supercontigCM002469.1:498869..498955 +
CM002469.1supercontigCM002469.1:499179..499237 +
CM002469.1supercontigCM002469.1:499369..499606 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR011074CRAL/TRIO_N_dom
IPR001251CRAL-TRIO_dom
Homology
BLAST of EWM23907.1 vs. NCBI_GenBank
Match: gi|585105189|gb|EWM23907.1| (sec14 cytosolic [Nannochloropsis gaditana])

HSP 1 Score: 667.537 bits (1721), Expect = 0.000e+0
Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0
Query:    1 MPESLYASLTGYIPVMGDATSEQLPSGGAAGAMSSRSPSLVSHSSRATTKDAQADEDSPMPSLLRRISNSIQFKRKGSHLPLPSADEIPANFLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMNVKLMKSAKLSPRDMALHLALVQEYVWTVLTPGDDRKIVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPADVEKFISPDVLPVEYGGKNSLKFGQSEEEVSLRALVDRNNAEGGDRQMDK 323
            MPESLYASLTGYIPVMGDATSEQLPSGGAAGAMSSRSPSLVSHSSRATTKDAQADEDSPMPSLLRRISNSIQFKRKGSHLPLPSADEIPANFLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMNVKLMKSAKLSPRDMALHLALVQEYVWTVLTPGDDRKIVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPADVEKFISPDVLPVEYGGKNSLKFGQSEEEVSLRALVDRNNAEGGDRQMDK
Sbjct:    1 MPESLYASLTGYIPVMGDATSEQLPSGGAAGAMSSRSPSLVSHSSRATTKDAQADEDSPMPSLLRRISNSIQFKRKGSHLPLPSADEIPANFLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMNVKLMKSAKLSPRDMALHLALVQEYVWTVLTPGDDRKIVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPADVEKFISPDVLPVEYGGKNSLKFGQSEEEVSLRALVDRNNAEGGDRQMDK 323          
BLAST of EWM23907.1 vs. NCBI_GenBank
Match: gi|673013740|ref|XP_008860831.1| (hypothetical protein H310_00028 [Aphanomyces invadans] >gi|574482429|gb|ETW09420.1| hypothetical protein H310_00028 [Aphanomyces invadans])

HSP 1 Score: 176.407 bits (446), Expect = 2.409e-46
Identity = 83/229 (36.24%), Postives = 142/229 (62.01%), Query Frame = 0
Query:   92 FLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMNVKLMKSAKLSPRDMALHLALVQEYVWTVLTPGDDRKIVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPA---DVEKFISPDVLPVEYGGKNSLKFGQSEEEVSLRALVDRNNAEGG 317
            F+A+ KGNVEK   +++ + QWR EN++D +LQ P PH+  +K  YP + HG+ ++G+C+  E  G +++K MK+A L+   +  H   + EY+WT+L P D  + VT++D  G+    LA  D L  +R A+  ++ +YP+R  +I +VN P +F  ++ ++S ++    +++ +IC   A   ++ K I+ D LP +YGG +S+K G+S+EEV+L   VD+  A  G
Sbjct:  478 FIAAEKGNVEKGRARYESTLQWRRENNVDGMLQEPQPHFHLIKKYYPQYFHGKSIKGHCVYYEKVGKIDLKAMKAAGLTIDQLLRHYVYLTEYMWTILEPSDSGRSVTVLDVNGIGFYDLAG-DVLLFVRQATGFVSANYPERSAQIFIVNVPTWFNMVWSVVSPMIDPVTKEKIRICKGRAVKEELLKSIAEDQLPADYGG-SSVKLGESDEEVALAKYVDQALAASG 704          
BLAST of EWM23907.1 vs. NCBI_GenBank
Match: gi|698793962|ref|XP_009830010.1| (hypothetical protein H257_06483 [Aphanomyces astaci] >gi|574114599|gb|ETV80086.1| hypothetical protein H257_06483 [Aphanomyces astaci])

HSP 1 Score: 168.703 bits (426), Expect = 1.690e-43
Identity = 80/222 (36.04%), Postives = 135/222 (60.81%), Query Frame = 0
Query:   92 FLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMNVKLMKSAKLSPRDMALHLALVQEYVWTVLTPGDDRKIVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPA---DVEKFISPDVLPVEYGGKNSLKFGQSEEEVSLRALVD 310
            F+A+ KGNV+K   +++ + QWR EN +D +L  P PH+  +K  YP + HG+ ++G+C+  E  G +++K MK+A L+   +  H   + EY+WT+L P D  + VT++D +G+    L   D +  +R A   ++ HYP+R  +I +VN PR+F  ++R++S ++    +++ +IC   A   ++ K I+ D LPV+YGG   +K G S EEV+L   VD
Sbjct:  483 FIAAEKGNVDKGRVRYENTLQWRRENRVDGMLHIPQPHFHLIKKNYPQYFHGQSIKGHCVYYEKVGKIDLKAMKAAGLTIEQLLRHYIYLTEYMWTILEPSDSGRSVTVLDVEGIGFYDLTG-DVMDFVRQAMGFVSAHYPERSAQIFIVNVPRWFDVVWRVVSPMIEPVTKEKIRICKGRAVKEELLKSIAEDQLPVDYGG-TGVKLGLSAEEVALAKHVD 702          
BLAST of EWM23907.1 vs. NCBI_GenBank
Match: gi|299469886|emb|CBN76740.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 159.458 bits (402), Expect = 6.072e-40
Identity = 79/231 (34.20%), Postives = 137/231 (59.31%), Query Frame = 0
Query:   87 EIPANFLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMNVKLMKSAKLSPRDMALHLALVQEYVWTVLTPG-DDRKIVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPADVEKF-------ISPDVLPVEYGGKNSLKFGQSEEEVSLRALV 309
            +IP  +L  C G+  +A R+W+++ +WR +  ID +L+ P PH+E +K  YP ++H R   G  + +E+PG +++  ++SA +SP  +  H   V EY+W VL P  ++ + VT++D +GL +  LA  ++L  ++ A+  + +HY +R  R+ +VNAP +F  I+R++  ++  + R Q +I     D +K        I+P+ LP +YGG   L  G+SEEE+ LR  V
Sbjct:  302 DIPGRYLRGCAGDPVEAERRWRLTLEWRAKERIDEVLREPQPHFELIKRHYPHYIHRRARNGCPVWIELPGRIDLPAIRSAGVSPEALQRHYVFVTEYMWGVLEPDFENGQAVTVLDVQGLGMRDLAG-EALGFVKQATAIVQDHYVERSNRMFIVNAPSYFSLIWRVIRPML--NERTQAKIGIINTDAKKIAAALLECIAPENLPRQYGGTCPLDLGESEEELDLRTYV 529          
BLAST of EWM23907.1 vs. NCBI_GenBank
Match: gi|1214702632|gb|OWZ14787.1| (SEC14 cytosolic factor [Phytophthora megakarya])

HSP 1 Score: 152.525 bits (384), Expect = 9.114e-38
Identity = 75/223 (33.63%), Postives = 127/223 (56.95%), Query Frame = 0
Query:   92 FLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMNVKLMKSAKLSPRDMALHLALVQEYVWTVLTPGDDRKIVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPA---DVEKFISPDVLPVEYGGKNSLKFGQSEEEVSLRALVDR 311
            F+A  KG+ EK   ++  + +WR+ENDID+IL  PHP++ET+K  YP + HGR  +G  +  E PG + +  +K   LS  D+  H   + EY+W V+ P D  + +T++D  G+ +  L   + L  I+ AS     HYP+R   I ++N P +F  I+R++  ++    R++  +    A   ++E  I P+ +P ++GG+  +  G SEEE +L A V++
Sbjct:  485 FIAGEKGDAEKGHARFLATLEWRKENDIDNILVTPHPNFETIKQYYPQYFHGRTREGQPVYYERPGKIQLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDSGRSITVLDVTGIGMYDLGG-EVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPLIDPVTREKVHMLKGSAILKELETLIDPENIPSDFGGEG-VALGDSEEEHALAAHVNK 705          
BLAST of EWM23907.1 vs. NCBI_GenBank
Match: gi|325190291|emb|CCA24767.1| (SEC14 cytosolic factor putative [Albugo laibachii Nc14])

HSP 1 Score: 150.599 bits (379), Expect = 3.503e-37
Identity = 75/234 (32.05%), Postives = 132/234 (56.41%), Query Frame = 0
Query:   84 SADEIPAN--FLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMNVKLMKSAKLSPRDMALHLALVQEYVWTVLTPGDDRKIVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPA----DVEKFISPDVLPVEYGGKNSLKFGQSEEEVSLRALVDR 311
            S   IP +  F+A+ KGN E+   ++  +  WR+END+D IL+RPH ++E +K  YP + HGR   GN +  E PG +++ ++K   LS  D+  H   + E++WT + P D  + +T++D  G+ ++ L   + L  I+ AS     HYP+R   I ++N P +F  I+R++  ++    R++  +         ++++ I  D +P EYGG+ +   G S EE +LR+ V++
Sbjct:  447 SGKSIPFSPRFIAAEKGNEERGKERYLQTLSWRKENDVDQILRRPHRNFENIKKCYPQYFHGRSKAGNPVYYEKPGKIDLLVLKQLGLSIEDLIYHYMYITEFLWTYIEPDDAARSITVLDVSGIGMSSLGG-EVLDFIKRASTFTAAHYPERSAHIFIINIPGWFNMIWRIVKPLIDPVTREKVHMLKGRGSILRELKQLIDIDQIPEEYGGQGA-PLGMSAEENTLRSHVNK 678          
BLAST of EWM23907.1 vs. NCBI_GenBank
Match: gi|673013738|ref|XP_008860830.1| (hypothetical protein H310_00027 [Aphanomyces invadans] >gi|574482428|gb|ETW09419.1| hypothetical protein H310_00027 [Aphanomyces invadans])

HSP 1 Score: 142.51 bits (358), Expect = 4.511e-37
Identity = 75/229 (32.75%), Postives = 122/229 (53.28%), Query Frame = 0
Query:   87 EIPAN--FLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMNVKLMKSAKLSPRDMALHLALVQEYVWTVLTPGDDRKIVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPADVEKF---ISPDVLPVEYGGKNSLKFGQSEEEVSLRALVD 310
            EIP +  F+A+ KGN EK  ++++ +  WR +N ID ++  P  H+  +K  YP + HG+   G+ +  E  GS+N K +K + LS   +  H   + EY+W VL P D+ + +T+ D +      L + D  + IR A      HYP+R  +I V+N P +F   +R +S ++    + + ++C+S A  E+    I  D LP  YGG  S   G+S+EE  L   V+
Sbjct:   22 EIPFSPRFIAAEKGNAEKGRQRYESTLSWRRDNRIDTLIDEPQVHFHLIKKNYPQYFHGKSKNGHRVYYEKLGSVNFKALKKSGLSMDQLLRHYMYITEYLWKVLDPSDNGRSITVFDVENFGFYDL-TGDVTSFIRQAMAFAGEHYPERSAQIYVINVPAWFHITYRAMSAMIDPVTKAKIRVCTSGAATEELLASIDADQLPSNYGG-TSCALGESDEEKMLAKHVN 248          
BLAST of EWM23907.1 vs. NCBI_GenBank
Match: gi|669150394|ref|XP_008610759.1| (hypothetical protein SDRG_06737 [Saprolegnia diclina VS20] >gi|530737755|gb|EQC35997.1| hypothetical protein SDRG_06737 [Saprolegnia diclina VS20])

HSP 1 Score: 148.288 bits (373), Expect = 2.590e-36
Identity = 75/223 (33.63%), Postives = 125/223 (56.05%), Query Frame = 0
Query:   92 FLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMNVKLMKSAKLSPRDMALHLALVQEYVWTVLTPGDDRKIVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPADVEKFI-SPDV--LPVEYGGKNSLKFGQSEEEVSLRALVDR 311
            FLA+ KG+  K   +++ + QWR EN +D IL    PH+  +K  YP + HGR   GNC+  E  G +++K +KSA LS   +  H   + EY+W +L P D  + ++++DA+G+    L   + +  +R A   ++ HYP+R  +I +VN P +F  I++ +S ++    +++ +IC      E+ + S D+  LP +YGG      G S EE +L A VD+
Sbjct:  478 FLAAEKGDEAKGRARYEATLQWRRENHVDGILYEVQPHFHLIKQCYPQYFHGRSKNGNCVYYEKLGKIDLKRLKSAGLSLDQLLRHYMYITEYLWLILEPSDTGRTISVLDAEGVGFYDLTG-EVMEFVRRAMAFVSAHYPERSAQIFIVNVPTWFNVIWKGISPLVDPVTKEKIRICKGKMVKEELLKSIDIAELPADYGGDGP-ALGGSAEEKALAAYVDQ 698          
BLAST of EWM23907.1 vs. NCBI_GenBank
Match: gi|813142080|ref|XP_012199172.1| (hypothetical protein SPRG_05178 [Saprolegnia parasitica CBS 223.65] >gi|641536093|gb|KDO29989.1| hypothetical protein SPRG_05178 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 148.288 bits (373), Expect = 3.054e-36
Identity = 76/224 (33.93%), Postives = 126/224 (56.25%), Query Frame = 0
Query:   91 NFLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMNVKLMKSAKLSPRDMALHLALVQEYVWTVLTPGDDRKIVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPADVEKFI-SPDV--LPVEYGGKNSLKFGQSEEEVSLRALVDR 311
             F+A+ KG+  K   +++ + QWR EN +D IL    PH+  +K  YP + HGR   GNC+  E  G +++K +KSA LS   +  H   + EY+W VL P D  + ++++DA+G+    L   + +  +R A   ++ HYP+R  +I +VN P +F  I++ +S ++    +++ +IC      E+ + S DV  LP +YGG      G+S EE +L A VD+
Sbjct:  469 RFVAAEKGDEVKGRARYEATLQWRRENHVDGILYEVQPHFHLIKQCYPQYFHGRSKNGNCVYYEKLGKIDLKRLKSAGLSLDQLLRHYMYITEYLWLVLEPSDTGRTISVLDAEGVGFYDLTG-EVMEFVRRAMAFVSAHYPERSAQIFIVNVPTWFNVIWKGISPLVDPVTKEKIRICKGKMVKEELLKSIDVAELPSDYGGDGP-ALGESAEEKALAAYVDQ 690          
BLAST of EWM23907.1 vs. NCBI_GenBank
Match: gi|1173952951|gb|OQS00525.1| (serine protease family S09A [Thraustotheca clavata])

HSP 1 Score: 148.288 bits (373), Expect = 4.897e-36
Identity = 81/254 (31.89%), Postives = 139/254 (54.72%), Query Frame = 0
Query:   86 DEIPANFLASCKGNVEKAGRKWQVSKQWREENDIDHILQRPHPHYETLKTVYPAFLHGRDLQGNCISVEIPGSMN--VKLMKSAKLSPRDMALHLALVQEYVWTVLTPGDDRK------IVTLMDAKGLSLTRLASPDSLALIRAASETLNNHYPDRVLRILVVNAPRFFGPIFRLLSTVMPASVRDQFQICSSPADVEK----FISPDVLPVEYGGKNSLKFG---QSEEEVSLRALVDR-NNAEGGDRQMDK 323
            +++   F+ +C  ++E+A RK+    QWR+ENDIDHILQRPHPH++ +K  Y    H  D  G+ IS+E+ GSM   ++   S  +   D+  HL    E++W V+    DR+      ++ ++D  G+SLT     D ++ ++  S     +YP+R+ ++ +VN P +F  I++ +S ++    RD+  +     +++K    +I  + LPVEYGG  + + G    S  EV LR  V+R N+ E     +D+
Sbjct:  432 EDVDPRFIVACNDDMEEAKRKFTKYLQWRKENDIDHILQRPHPHFKVIKESYIHLTHKEDKNGHIISIELAGSMKKGMQHFLSLGVVETDVVYHLGFYNEFLWNVI----DRRPLPLGTMLKIVDMNGVSLTDFGG-DVVSFMKQCSSVGELYYPERLYKVFIVNPPSWFNIIWKAMSPLINPKTRDKINVVKGQKEIQKALLEYIDAENLPVEYGGTCACEGGCLTHSPHEVLLRDYVERLNSGEDCTAYLDR 680          
The following BLAST results are available for this feature:
BLAST of EWM23907.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105189|gb|EWM23907.1|0.000e+0100.00sec14 cytosolic [Nannochloropsis gaditana][more]
gi|673013740|ref|XP_008860831.1|2.409e-4636.24hypothetical protein H310_00028 [Aphanomyces invad... [more]
gi|698793962|ref|XP_009830010.1|1.690e-4336.04hypothetical protein H257_06483 [Aphanomyces astac... [more]
gi|299469886|emb|CBN76740.1|6.072e-4034.20conserved unknown protein [Ectocarpus siliculosus][more]
gi|1214702632|gb|OWZ14787.1|9.114e-3833.63SEC14 cytosolic factor [Phytophthora megakarya][more]
gi|325190291|emb|CCA24767.1|3.503e-3732.05SEC14 cytosolic factor putative [Albugo laibachii ... [more]
gi|673013738|ref|XP_008860830.1|4.511e-3732.75hypothetical protein H310_00027 [Aphanomyces invad... [more]
gi|669150394|ref|XP_008610759.1|2.590e-3633.63hypothetical protein SDRG_06737 [Saprolegnia dicli... [more]
gi|813142080|ref|XP_012199172.1|3.054e-3633.93hypothetical protein SPRG_05178 [Saprolegnia paras... [more]
gi|1173952951|gb|OQS00525.1|4.897e-3631.89serine protease family S09A [Thraustotheca clavata... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6786rna6786Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications