|
|
Properties
| Property Name | Value |
|---|
| Product | adenine phosphoribosyltransferase |
| Orig transcript id | gnl|cribi|Naga_100113g10.9979.mrna |
| Orig protein id | gnl|cribi|Naga_100113g10.9979 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:489349..490591 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6782 ID=rna6782|Name=rna6782|organism=Nannochloropsis gaditana|type=mRNA|length=1578bp
ATGGCCAAAAGAAGACCCCATCTGGTCATGCCCTTATCCTCTGCAGCCAG
CGCCGCGCTTCCTCTGACGTTGTTCCTCCTTCTTGCCGGGCCAGCCCTCT
CGTACCTGTCACATGTGCCCCCGATTGTAAGCAAATCACGCGTTTTTGCG
GCTAAACAAAATCATCATAGCCAGCTCGTACGGCAACGTACCCCAACGGC
TCTGACGTTCAGCACGGCAACCTCATCGGACGAGAGGGGCCACATCACTC
GTACTGAACTCGTGGGAGCGGCCAAGTTTGTACGACAGAACCCTAAATCA
GACCGTTTCAAAGTCTTGAGCTTTCATCACGTGGAAATCTACTGTGGGGA
CGCCACTAACACCTATCGTCGTTTCCAGTTGGGCCTGGGTATGAACCTGG
TGGCCAAGTCGGACTTGTCTACTGGTAATCCGCTTTTCGCAAGTTATTGC
CTGCGGTCCCAGAGGCTGCAGATGGTCTTTAGTGCACCGTACTCCATGAA
TAAGGTGGCAGCAGAAGAAGGGTCGTCGATGGGGAAGGGAGAGATTGTAG
AGAGAAGAAGCAGCCCGAACCCAGGTTTTGAGGCCTCGCACGCCACGCAG
TTCTTCAACAGGCACGGAGTGGCTGTGCGGGCCTTGGGGCTGGAAGTGGA
GGACGCGAGACAAGCGTACCAGGAATGTGTTGCTAACGGCGGACAAGGAG
TGCTAGAGCCTGTCCGACTGGATCCCTCCCCGGGCTTGGGGCGGGACGGG
TACTTGGTGATGTCGGAGGTGCAGGCCTACGGAGACGTTGTCCTGCGCTT
TGTCTCGAGACATGGGGGCTACGCGGGCAGCTTCCTTCCGGGCTATCAGG
AGGAGACAAGTGCGGCTTACACAACGGGTGCCAAGGTGGAAAGGTCTCTT
GACTATGGTCTCGAACGCATCGACCACGCGGTAGGAAACGTCTGGGAGCT
GAACGAGGCTGTGTCGTACTTGGAAAAAATGACGGGCTTCCACCCTTTTG
CGGAATTCGTCGCGAAAGACGTGGGCACTGTCGATTCTGGATTGAACTCC
GTCGTCCTTGCCAACAACGCGGAAGATGTCCTGATCCCCTTGAATGAGCC
CACGTACGGGACCAAGCGGAAGTCTCAGATTCAAACCTACTTAGAGTGCA
ACAACGGCCCCGGATTGCAGCACTTGGCCTTAGCCACGCGCGACATATTC
ACAACAATGCGAAAGATGCGGGCAGTCTCAGAAATGGGCGGCTTCACATT
CATGGCCCCGCCGCCTCCATCGTACTACCGGGCCTTGCCGGAAAGACTGG
GCGGGAGCTTGACGGCCTCGCAGCTGGCACAGATAGAGGAGTTGGGGCTG
CTGGCCGATAAAGACGACCAGGGCGTGTTATTACAGATTTTCACCGTGCC
CGTAGGGGATCGACCAACGCTTTTTCTGGAGATCATTCAACGCATCGGTT
GTGAGTCTCCAGATCCCAATCATTCGGAACAAACGAAACAGAGGGGAGGT
TGCGGTGGGTTTGGGAAGGGAAATTTCGCCGCCCTTTTCAAATCCATAGA
GGAGTATGAAAAAACGCTGGATGTTTAG back to topprotein sequence of rna6782 >rna6782-protein ID=rna6782-protein|Name=rna6782|organism=Nannochloropsis gaditana|type=polypeptide|length=222bp
MAGVNPATSQDYEEDKRKIAAVIPYYAFKGIDRFYDISGLLLSPALLRRT
IEILVERYKGMAIDKIGGFDARGFLLGTPLALELDIPFFMLRKQSKLPNS
VTGDSYTKEYEGDDGKGGDALCISRTAIIPGDKVLLVDDLIATGGTLLAG
LDLVHARQGVVVEAACMIELGFLEGGKKVRERNPNVTVWSLLSEDHLQTR
GLPPGTGGNSAAGSACASDGKC back to topmRNA from alignment at CM002469.1:489349..490591+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6782 ID=rna6782|Name=rna6782|organism=Nannochloropsis gaditana|type=mRNA|length=1243bp|location=Sequence derived from alignment at CM002469.1:489349..490591+ (Nannochloropsis gaditana)
GGCATGACCAGATGGGGTCTTCTTTTGGCCATCGGGATGTGATATGTGTG
CTGCAGCACCTACAATTGAAAGCGCAGGATGATGAGATGGTGTGACAACC
ACAGTAGCAACAAATACGGGCATATCAATGGGCAATCGAGCCGCCCGGAC
AGGCATCcactgggaggaggttggtcAGAGAATCCAAATGCGGAGGAAAG
TTACCGTTCTCGTCGTCTGTATTTTAAAGTCGTGTCGTTGTCTTGTTTGA
GTTTGTTGTGGTTTGATATTGATCAACGATAGGCGACTCCTCACACACTT
CCTTTTTTGATGTCGATGTTCGGCAGGGTTTACGCTCACTTTCCCAGTTA
GGGTCCTAGAAGCATGGCCGGAGTCAACCCTGCGACTTCGCAGGATTACG
AGGAGGATAAACGCAAGTATGGTCATTTGATAAATTTGATAAATATGGGG
AACGAGAAGGCATCGCACTTCCCTGGACTGGCGTTGCCTATTTTTTAATT
tgctccttccatccccctcctttctgtccaTCCATACCAAGGATCGCGGC
TGTAATCCCTTATTACGCCTTCAAAGGCATTGACCGCTTTTACGACATCA
GCGGCCTTCTGCTATCTCCTGCTTTGCTTCGTCGGACCATAGAAATACTA
GTCGAAAGGTACAAGGGCATGGCGATCGACAAGATCGGGGGCTTCGACGC
CCGAGGCTTCCTGTTGGGCACGCCGTTGGCTTTGGAATTGGACATCCCCT
TCTTCATGCTACGAAAGCAAAGCAAACTTCCAAATTCTGTGACAGGGGAC
AGCTATACAAAGGAGTACGAGGGTGACGATggtaaggggggggacgcccT
GTGCATCTCTCGCACTGCGATCATCCCGGGGGACAAGGTTCTGCTGGTCG
ACGACCTGATCGCGACCGGGGGAACGCTCTTGGCGGGCTTGGACTTGGTC
CACGCGCGACAAggagtggtggtggaagcggCGTGCATGATTGAGCTGGG
ATTTCTGGAAGGTGGAAAGAAAGTGCGCGAGAGGAATCCTAACGTGACTG
TGTGGTCTTTACTCTCCGAGGATCACTTGCAGACGAGAGGCCTCCCcccg
gggacgggaggaaataGCGCCGCGGGCTCTGCCTGTGCTTCGGATGGGAA
GTGTTGAGACGGTTGAGAAAGAAGGTGGGATGGAATAAGATTCAGAGGAA
CCGTTGGGTCACCGAAAGCACAATCTTGGAGCAATGAGCGAGA back to topCoding sequence (CDS) from alignment at CM002469.1:489349..490591+ >rna6782 ID=rna6782|Name=rna6782|organism=Nannochloropsis gaditana|type=CDS|length=1338bp|location=Sequence derived from alignment at CM002469.1:489349..490591+ (Nannochloropsis gaditana)
ATGGCCGGAGTCAACCCTGCGACTTCGCAGGATTACGAGGAGGATAAACG
CAAGATCGCGGCTGTAATCCCTTATTACGCCTTCAAAGGCATTGACCGCT
TTTACGACATCAGCGGCCTTCTGCTATCTCCTGCTTTGCTTCGTCGGACC
ATAGAAATACTAGTCGAAAGGTACAAGGGCATGGCGATCGACAAGATCGG
GGGCTTCGACGCCCGAGGCTTCCTGTTGGGCACGCCGTTGGCTTTGGAAT
TGGACATCCCCTTCTTCATGCTACGAAAGCAAAGCAAACTTCCAAATTCT
GTGACAGGGGACAGCTATACAAAGGAGTACGAGGGTGACGATggtaaggg
gggggacgcccTGTGCATCTCTCGCACTGCGATCATCCCGGGGGACAAGG
TTCTGCTGGTCGACGACCTGATCGCGACCGGGGGAACGCTCTTGGCGGGC
TTGGACTTGGTCCACGCGCGACAAggagtggtggtggaagcggCGTGCAT
GATTGAGCTGGGATTTCTGGAAGGTGGAAAGAAAGTGCGCGAGAGGAATC
CTAACGTGACTGTGTGGTCTTTACTCTCCGAGGATCACTTGCAGACGAGA
GGCCTCCCcccggggacgggaggaaataGCGCCGCGGGCTCTGCCTGTGC
TTCGGATGGGAAGTGTTGAATGGCCGGAGTCAACCCTGCGACTTCGCAGG
ATTACGAGGAGGATAAACGCAAGATCGCGGCTGTAATCCCTTATTACGCC
TTCAAAGGCATTGACCGCTTTTACGACATCAGCGGCCTTCTGCTATCTCC
TGCTTTGCTTCGTCGGACCATAGAAATACTAGTCGAAAGGTACAAGGGCA
TGGCGATCGACAAGATCGGGGGCTTCGACGCCCGAGGCTTCCTGTTGGGC
ACGCCGTTGGCTTTGGAATTGGACATCCCCTTCTTCATGCTACGAAAGCA
AAGCAAACTTCCAAATTCTGTGACAGGGGACAGCTATACAAAGGAGTACG
AGGGTGACGATggtaaggggggggacgcccTGTGCATCTCTCGCACTGCG
ATCATCCCGGGGGACAAGGTTCTGCTGGTCGACGACCTGATCGCGACCGG
GGGAACGCTCTTGGCGGGCTTGGACTTGGTCCACGCGCGACAAggagtgg
tggtggaagcggCGTGCATGATTGAGCTGGGATTTCTGGAAGGTGGAAAG
AAAGTGCGCGAGAGGAATCCTAACGTGACTGTGTGGTCTTTACTCTCCGA
GGATCACTTGCAGACGAGAGGCCTCCCcccggggacgggaggaaataGCG
CCGCGGGCTCTGCCTGTGCTTCGGATGGGAAGTGTTGA back to top
|