EWM23913.1, cds6766 (CDS) Nannochloropsis gaditana

Overview
NameEWM23913.1
Unique Namecds6766
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:489712..489764 +
Alignment locationCM002469.1:489890..490505 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23913.1
Productadenine phosphoribosyltransferase
Orig transcript idgnl|cribi|Naga_100113g10.9979.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:489712..489764 +
CM002469.1supercontigCM002469.1:489890..490505 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009116nucleoside metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR000836PRibTrfase_dom
IPR029057PRTase-like
Homology
BLAST of EWM23913.1 vs. NCBI_GenBank
Match: gi|553184947|ref|XP_005854175.1| (adenine phosphoribosyltransferase [Nannochloropsis gaditana CCMP526] >gi|422294886|gb|EKU22186.1| adenine phosphoribosyltransferase [Nannochloropsis gaditana CCMP526] >gi|585105195|gb|EWM23913.1| adenine phosphoribosyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 449.129 bits (1154), Expect = 1.291e-159
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
Query:    1 MAGVNPATSQDYEEDKRKIAAVIPYYAFKGIDRFYDISGLLLSPALLRRTIEILVERYKGMAIDKIGGFDARGFLLGTPLALELDIPFFMLRKQSKLPNSVTGDSYTKEYEGDDGKGGDALCISRTAIIPGDKVLLVDDLIATGGTLLAGLDLVHARQGVVVEAACMIELGFLEGGKKVRERNPNVTVWSLLSEDHLQTRGLPPGTGGNSAAGSACASDGKC 222
            MAGVNPATSQDYEEDKRKIAAVIPYYAFKGIDRFYDISGLLLSPALLRRTIEILVERYKGMAIDKIGGFDARGFLLGTPLALELDIPFFMLRKQSKLPNSVTGDSYTKEYEGDDGKGGDALCISRTAIIPGDKVLLVDDLIATGGTLLAGLDLVHARQGVVVEAACMIELGFLEGGKKVRERNPNVTVWSLLSEDHLQTRGLPPGTGGNSAAGSACASDGKC
Sbjct:    1 MAGVNPATSQDYEEDKRKIAAVIPYYAFKGIDRFYDISGLLLSPALLRRTIEILVERYKGMAIDKIGGFDARGFLLGTPLALELDIPFFMLRKQSKLPNSVTGDSYTKEYEGDDGKGGDALCISRTAIIPGDKVLLVDDLIATGGTLLAGLDLVHARQGVVVEAACMIELGFLEGGKKVRERNPNVTVWSLLSEDHLQTRGLPPGTGGNSAAGSACASDGKC 222          
BLAST of EWM23913.1 vs. NCBI_GenBank
Match: gi|298715811|emb|CBJ28276.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 192.2 bits (487), Expect = 6.405e-59
Identity = 91/158 (57.59%), Postives = 117/158 (74.05%), Query Frame = 0
Query:   44 PALLRRTIEILVERYKGMAIDKIGGFDARGFLLGTPLALELDIPFFMLRKQSKLPNSVTGDSYTKEYEGDDGKGGDALCISRTAIIPGDKVLLVDDLIATGGTLLAGLDLVHARQGVVVEAACMIELGFLEGGKKVRERNPNVTVWSLLSEDHLQTRG 201
            P      ++I  +RY+GM ID IGGFDARGF+LG P+AL L+IPFFMLRK+ K+PN + G +Y+KEY+GDDG G DALC+ R+A   G +V+LVDDL+ATGGTL+AG+DLV      VVE ACMIEL  L G  K+ ER+ +V VWSL+SE+ L  +G
Sbjct:    5 PEAFALAVKIFADRYRGMKIDSIGGFDARGFILGPPVALALNIPFFMLRKKGKMPNVIDGAAYSKEYKGDDGAGQDALCVQRSAATAGQRVVLVDDLVATGGTLMAGVDLVKGLGAEVVECACMIELKALNGVGKLHERHADVPVWSLISENILTVKG 162          
BLAST of EWM23913.1 vs. NCBI_GenBank
Match: gi|922868305|gb|KOO34727.1| (adenine phosphoribosyltransferase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 182.185 bits (461), Expect = 5.518e-54
Identity = 104/224 (46.43%), Postives = 137/224 (61.16%), Query Frame = 0
Query:    6 PATSQDYEED---KRKIAAVIPYYAFKGIDRFYDISGLLLSPALLRRTIEILVERYKGMAIDKIGGFDARGFLLGTPLALELDIPFFMLRKQSKLPNSVTGDSYTKEYEGDDG---------KGGDALCISRTAIIPGDKVLLVDDLIATGGTLLAGLDLVHARQGVVVEAACMIEL----------GFLEGGKKVRERN-PNVTVWSLLSEDHLQTRG-LPPG 205
            P TS  YE+D    ++IAAVIPYY FKGI RFYDI+G L  P + +  ++I V RY+G  ID IGGFDARGF+LG P+AL L IPFFM RK  K+PN ++  +++ EY   +G           GD +  S T +  GD+VLL+DDL+ATGGTL +G++LV      VVE AC++EL          G     K  +E+   +V VW L+SED L  +G LP G
Sbjct:   11 PMTSAAYEQDGEAAKRIAAVIPYYPFKGIARFYDITGFLTRPDIFQEVVDIFVARYRGKQIDSIGGFDARGFVLGPPIALALKIPFFMFRKPGKMPNGISSSAFSVEYGKREGMCLPRGMPLHKGDPMMKS-TVVKEGDRVLLIDDLVATGGTLSSGIELVRKVGATVVECACVVELKLFIDPPPESGLPNRTKMWKEKGIDDVPVWGLISEDVLTLQGELPEG 233          
BLAST of EWM23913.1 vs. NCBI_GenBank
Match: gi|676379291|ref|XP_009032924.1| (hypothetical protein AURANDRAFT_52161 [Aureococcus anophagefferens] >gi|323455928|gb|EGB11795.1| hypothetical protein AURANDRAFT_52161 [Aureococcus anophagefferens])

HSP 1 Score: 176.792 bits (447), Expect = 1.206e-51
Identity = 94/165 (56.97%), Postives = 114/165 (69.09%), Query Frame = 0
Query:    5 NPATSQ-DYEED---KRKIAAVIPYYAFKGIDRFYDISGLLLSPALLRRTIEILVERYKGMAIDKIGGFDARGFLLGTPLALELDIPFFMLRKQSKLPNSVTGDSYTKEYEGDDGKGGDALCISRTAIIPGDKVLLVDDLIATGGTLLAGLDLVHARQGVVVEAA 165
             P TS+ DY +D    ++IA+V PY+ FKGIDRFYDI G L  P      +E+LVERY+   ID + G DARGF+LG PLAL L  PFFMLRK+ K+PN+VTG +Y KEY G+     DAL I R A+  GDKVL+VDDL+ATGGTLLA LDL+    GVV E A
Sbjct:   10 TPGTSRADYTQDGPVAQRIASVTPYFPFKGIDRFYDIGGFLKDPEAFALVVEVLVERYRDADIDSVCGLDARGFVLGPPLALALKKPFFMLRKKGKMPNAVTGAAYAKEYAGN-----DALSIPRGAVKAGDKVLVVDDLVATGGTLLAALDLIAKFDGVVPECA 169          
BLAST of EWM23913.1 vs. NCBI_GenBank
Match: gi|1210531749|dbj|GAX09716.1| (adenine phosphoribosyltransferase [Fistulifera solaris])

HSP 1 Score: 165.236 bits (417), Expect = 1.458e-47
Identity = 91/216 (42.13%), Postives = 126/216 (58.33%), Query Frame = 0
Query:    5 NPATSQDYEED---KRKIAAVIPYYAFKGIDRFYDISGLLLSPALLRRTIEILVERYKGMAIDKIGGFDARGFLLGTPLALELDIPFFMLRKQSKLPNSVTGDSYTKEYEGDDGKGGDALCISRTAIIPGDKVLLVDDLIATGGTLLAGLDLVHARQGVVVEAACMIELGFL-----EGGKKVRER------NPNVTVWSLLSEDHLQTRG-LPPG 205
            N  +  +Y++D    R+IA  +PY+ FKGI RFYDI G L  PA+ ++ ++I   RY+G+A+D I G DARGF+LG P+AL L  PF M+RKQ K+PN+V+   Y  EY    G     L + R  I  G +VL++DDL+ATGGTL + + LV    G+ VE AC++EL        E G   R        + +V +W L+SED L     LP G
Sbjct:    4 NNNSKDEYQQDGPEAREIAKYLPYFPFKGIPRFYDIGGFLYEPAIFQQIVDIFTVRYRGLAVDCIAGLDARGFVLGPPIALALQKPFVMMRKQGKMPNTVSSTQYETEYGSRSG-----LTVQRDRIQQGMRVLIIDDLVATGGTLSSAITLVKMLGGIPVECACVVELKMFINPPKESGLPSRTELFRKLGHDHVPIWGLISEDVLTLEAQLPEG 214          
BLAST of EWM23913.1 vs. NCBI_GenBank
Match: gi|1210521615|dbj|GAX19605.1| (adenine phosphoribosyltransferase [Fistulifera solaris])

HSP 1 Score: 165.236 bits (417), Expect = 1.556e-47
Identity = 90/216 (41.67%), Postives = 127/216 (58.80%), Query Frame = 0
Query:    5 NPATSQDYEED---KRKIAAVIPYYAFKGIDRFYDISGLLLSPALLRRTIEILVERYKGMAIDKIGGFDARGFLLGTPLALELDIPFFMLRKQSKLPNSVTGDSYTKEYEGDDGKGGDALCISRTAIIPGDKVLLVDDLIATGGTLLAGLDLVHARQGVVVEAACMIELGFL-----EGGKKVRER------NPNVTVWSLLSEDHLQTRG-LPPG 205
            N  ++ +Y++D    R+IA  +PY+ FKGI RFYDI G L  PA+ ++ ++I   RY+G+A+D I G DARGF+LG P+AL L  PF M+RKQ K+PN+++   Y  EY    G     L + R  I  G +VL++DDL+ATGGTL + + LV    G+ VE AC++EL        E G   R        + +V +W L+SED L     LP G
Sbjct:    4 NNNSNDEYQQDGPEAREIAKYLPYFPFKGIPRFYDIGGFLYEPAIFQQIVDIFTARYRGLAVDCIAGLDARGFVLGPPIALALQKPFVMMRKQGKMPNTISSTQYETEYGSRSG-----LTVQRDRIQQGMRVLIIDDLVATGGTLSSAITLVKMLGGIPVECACVVELKMFIDPPKESGLPSRTELFRKLGHDHVPIWGLISEDVLTLEAPLPEG 214          
BLAST of EWM23913.1 vs. NCBI_GenBank
Match: gi|1129170206|gb|OLP80542.1| (Adenine phosphoribosyltransferase 1 [Symbiodinium microadriaticum])

HSP 1 Score: 175.637 bits (444), Expect = 2.887e-47
Identity = 88/188 (46.81%), Postives = 125/188 (66.49%), Query Frame = 0
Query:   17 RKIAAVIPYYAFKGIDRFYDISGLLLSPALLRRTIEILVERYKGMAIDKIGGFDARGFLLGTPLALELDIPFFMLRKQSKLPNSVTGDSYTKEYEGDDGKGGDALCISRTAIIPGDKVLLVDDLIATGGTLLAGLDLVHARQGVVVEAACMIELGFLEGGKKVRERNPNVTVWSLLSEDHLQTRGLPP 204
            ++IA  IPY+ FK I+RFYDI GLL  P LL     +  +R++ M + KI GF+ARGFL  TP++++L +PF MLRK  KLPN+++   YTKEY+G      D +C+ + A++ GDKV+L+DDLIATGGTL AG+ L+ A +  VVE +CM+EL  L+G +K        +VW  +SE+ L T+   P
Sbjct:  157 KEIALHIPYFPFKKIERFYDIQGLLQHPKLLNAMCAVWAKRFRKMGVTKICGFEARGFLF-TPVSIKLGVPFVMLRKAGKLPNTISSGPYTKEYDG-----LDEMCVQKGAVVKGDKVVLIDDLIATGGTLCAGIKLMEACEAEVVECSCMVELKALKGREKCLAAGAK-SVWGYISEELLTTKAELP 337          
BLAST of EWM23913.1 vs. NCBI_GenBank
Match: gi|224004638|ref|XP_002295970.1| (probable adenine phosphoribosyltransferase, partial [Thalassiosira pseudonana CCMP1335] >gi|209586002|gb|ACI64687.1| probable adenine phosphoribosyltransferase, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 155.992 bits (393), Expect = 6.215e-45
Identity = 75/148 (50.68%), Postives = 101/148 (68.24%), Query Frame = 0
Query:   23 IPYYAFKGIDRFYDISGLLLSPALLRRTIEILVERYKGMAIDKIGGFDARGFLLGTPLALELDIPFFMLRKQSKLPNSVTGDSYTKEYEGDDGKGGDALCISRTAIIPGDKVLLVDDLIATGGTLLAGLDLVHARQGVVVEAACMIEL 170
            +PY+ FKGI RFYDI G L  P + ++ ++I V RY+ + ID I G DARGF+LG P+AL L  PF M+RKQ K+PNS++ D+Y  EY    G     L + R  I  GD+VL++DDL+ATGGTL + ++LVH   G VVE AC++EL
Sbjct:    3 LPYFPFKGIPRFYDIGGFLEKPDVFQQIVDIFVSRYREIGIDSIAGLDARGFILGPPIALALRKPFLMMRKQGKMPNSISSDAYDTEYGKRSG-----LTVQRDKIKKGDRVLIIDDLVATGGTLSSAINLVHMLGGEVVECACVVEL 145          
BLAST of EWM23913.1 vs. NCBI_GenBank
Match: gi|698812784|ref|XP_009839421.1| (adenine phosphoribosyltransferase [Aphanomyces astaci] >gi|574105652|gb|ETV71175.1| adenine phosphoribosyltransferase [Aphanomyces astaci])

HSP 1 Score: 154.836 bits (390), Expect = 7.206e-44
Identity = 92/195 (47.18%), Postives = 117/195 (60.00%), Query Frame = 0
Query:    9 SQDYEEDKRKIAAVIPYYAFKGIDRFYDISGLLLSPALLRRTIEILVERYKGMA--IDKIGGFDARGFLLGTPLALELDIPFFMLRKQSKLPNSVTGDSYTKEYEGDDGK-GGDALCISRTAIIPGDKVLLVDDLIATGGTLLAGLDLVHARQGVVVEAACMIELGFLEGGKKVRERNPNVTVWSLLSEDHLQTR 200
            S + ++   ++AA IP   FKG+  FYDI GLL  P      I++LV   +  A  I  IG FDARGFLLG  LA+ L    FMLRK  K+P       Y KEY GDD   G D LCI   A++ GDKVLL+DDL+ATGGT+ AGLDLV    G V+   C+IEL  L G +++  R+P+ T + LLSE HL  +
Sbjct:    4 SSNSDDRLHQVAACIPIVPFKGVS-FYDIGGLLAHPVEFAMCIDLLVAYCEPFADRISSIGCFDARGFLLGPILAVRLKKKVFMLRKPDKMPRVSHSVRYGKEYVGDDPTVGDDGLCIQEGAVVAGDKVLLIDDLLATGGTMEAGLDLVKQCGGEVLSCICLIELDALRGRQRIASRHPDTTFFHLLSE-HLWAK 196          
BLAST of EWM23913.1 vs. NCBI_GenBank
Match: gi|1072235041|gb|OEU19770.1| (PRTase-like protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 153.68 bits (387), Expect = 4.675e-43
Identity = 96/217 (44.24%), Postives = 129/217 (59.45%), Query Frame = 0
Query:    1 MAGVNPATSQDYEEDKRKIAAVIPYYAFKGIDRFYDISGLLLSPALLRRTIEILVERYKGMAIDKIGGFDARGFLLGTPLALELDIPFFMLRKQSKLPNSVTGDSYTKEYEGDDGKGGDALCISRTAIIPGDKVLLVDDLIATGGTLLAGLDLVHARQGVVVEAACMIELGFL-----EGGKKVRER------NPNVTVWSLLSEDHLQTRG-LPPG 205
            M+ ++    QD EE K +IA  +PY+ FKGIDRFYDI G L  PA+ ++ ++I VERY+ + ID + G DARGF+LG P+AL L  PF M+RK+ K+PN+V    Y  EY    G     L +    I  GD+VL++DDL+ATGGTL + + LV    GVVVE AC++EL        E G   R +      + +V VW L+SED L     LP G
Sbjct:    1 MSSLDLKYKQDGEEAK-EIAKYLPYFPFKGIDRFYDIGGFLYEPAVFQKIVDIFVERYQAIGIDVVAGLDARGFILGPPIALALKKPFIMMRKKGKMPNTVESKEYETEYGSRSG-----LTVQADKIKKGDRVLIIDDLVATGGTLSSAISLVKQLDGVVVECACVVELKLFIDPSEESGLPSRTKSFAKLGHQDVPVWGLVSEDILLNEAELPKG 211          
The following BLAST results are available for this feature:
BLAST of EWM23913.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553184947|ref|XP_005854175.1|1.291e-159100.00adenine phosphoribosyltransferase [Nannochloropsis... [more]
gi|298715811|emb|CBJ28276.1|6.405e-5957.59conserved unknown protein [Ectocarpus siliculosus][more]
gi|922868305|gb|KOO34727.1|5.518e-5446.43adenine phosphoribosyltransferase [Chrysochromulin... [more]
gi|676379291|ref|XP_009032924.1|1.206e-5156.97hypothetical protein AURANDRAFT_52161 [Aureococcus... [more]
gi|1210531749|dbj|GAX09716.1|1.458e-4742.13adenine phosphoribosyltransferase [Fistulifera sol... [more]
gi|1210521615|dbj|GAX19605.1|1.556e-4741.67adenine phosphoribosyltransferase [Fistulifera sol... [more]
gi|1129170206|gb|OLP80542.1|2.887e-4746.81Adenine phosphoribosyltransferase 1 [Symbiodinium ... [more]
gi|224004638|ref|XP_002295970.1|6.215e-4550.68probable adenine phosphoribosyltransferase, partia... [more]
gi|698812784|ref|XP_009839421.1|7.206e-4447.18adenine phosphoribosyltransferase [Aphanomyces ast... [more]
gi|1072235041|gb|OEU19770.1|4.675e-4344.24PRTase-like protein [Fragilariopsis cylindrus CCMP... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6782rna6782Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications