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Properties
| Property Name | Value |
|---|
| Product | mago nashi |
| Orig transcript id | gnl|cribi|Naga_100113g5.9968.mrna |
| Orig protein id | gnl|cribi|Naga_100113g5.9968 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:484150..486364 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6778 ID=rna6778|Name=rna6778|organism=Nannochloropsis gaditana|type=mRNA|length=3587bp
TTCACAGGCGGTTTCAATCATTGAGAACCTAGAAGAAGGATCTTTAGCCA
ATAGGGCTTCCGCTGCCTCTCCTCCTCCATACGTTCCAATTAGCCCTGAT
AGCGAAACAACTGACTTAAGCGAAGGCGAGCCGGCGGGTGCGTTAACCAC
GGCAACAGTGGCGGATCCTACTCAGTGCCTGGGAGTCCTACACTCGCCCG
CGGGTGGACAGACCTCTTTCCCTACATCTGCTTCTCCGAATCGTAGATCG
GCAGCTGCTCCGCCAAGTTACGAAGAGTACGGTCGCGTGACACGCGCATT
ATCTTCCCCAGTCATGGAAACCTTAAATGACATGGAATTGCAGACAGGCT
ACGAGACCCCTCGGCCCACTGTGCAAGACCGTCTCAAACGATGGTGGGAG
GAAATACGCGCTGAGTGGCGTATTCTGGGTGTCTTTCTTCTGTTGATTGT
CATCTGCTTCCTCCTCGCAGATCTCGACTTGAGTGTGCATTTGCAGACGA
TGTCGGAGGGCAAGGTCATGTCTTATCCCATGCTCAAAGAGGCGTTCGAC
AAGCACCCAAGCTTCTTCGATTTCTACACCTTACCTTCGGATGATGAATC
CCTGATTCTGGAAATGCCTAAGGCTTTTTTCAACCAAACTCCCTCAAGAC
CTGTCATCTTTAGCGCCACTTTCGCCCGCGGAGCCTGGGATGACTCCTCC
AGCCTCTTACTCCTCCACGAACCCGCCGAGGCCACGGACCACGTTGTCTT
TACTTTCAACATCACGTCTGATGGCTCTGGCATAGACGTGTTCCGAGAAC
AGTATGGCGTGCGGACCAGCAGCCCGGACTACGCCATGCCGGTAGAGCTC
GGGGCCCTGTCATTGCGCGTGGGGACCTTGCCCATTGTGATTGACCACCA
TGGCTCCAGTGACGACGAGGAAGGAAGCTACGTAGTAGATGCCTCAGGTT
TGATTGAGAACGGCTTCTACATCACAGACGTGACAGGTGCGGAAGACGCT
AGGCTGCGCTTGGACCTGAGCCGGTCCTTCCCCGAGAACCTGGACATCAC
GGCCGAGTACCTCCTTCCTCTCGACCCCTCTGACCCGGCGTCGCCCAAGG
TCAGTGAGACGATTAGTTTTTCCATGGCTCTACTGCCTGAGAGGCCTCTC
GTGGCCCGCGCGTTGGACGAACGCATTGGTTTCTTCTCCATCGGCTACCA
GGACGTGGGCGACCATCGCCACGACCCCAACGTGACGGCCTCGCACAAGC
ATTTGGCCGACCGTGTGGACACCAAGGTTAAGATCATCAATCGCCGCCGT
CTCTCTTCAGGCGCGAATGAAAGCGCCATCACGTACTACATCGACCCCAC
GGTGCCGAAACAGTGGCGGGAGTCATTTCGGCAGGGCGTAGAGGCCTGGC
GTCCGGCTTTCCAAGCTGCTGGCTTCGGCCCAGCGGCCATTCGAGCCATT
CTACCCAACGAAAGCGGCTGGCCAGACGATTATCAGGTGGGAGACCTGCG
GTATTCCACCATCAGTTGGGTTGTCGATATGGATACCACCTTCGCGCTGG
GCCCGTCCGTGGTAGACCCGCGTTCGGGCGAAATCTTGAAGTCGGACATC
ATCTTCACGCACGGATGGGTCAAGCACTGGATCTCATACATGGAAATGAT
GGACAGCTCTAAGAATCCTGCCCAGTCCGCCACGGGCCTCGATGCGCTAG
ACCCCGCTCGGGAGGCAGCAGATCTGCAGCGACTGCTCGGCGTGGACCAC
GGAGGGCAACGCGAACACAGCCACGAGCACAAGCATGGCCACGACCATGG
GAACGACCACGATCCAGTGAGGACCTTGGCAGGCCGACCCTGGACTCGAA
TGCACCCTTCCCGGCGGACCACGCTCAGGCACGCGCACCGGCATGGACGA
TGTCAGGAGGCGAGGGCGAAGTATGACTTGTCACCCAAGTTAGCTTTACT
GGCCCGAGAGCTGGCGGGCAAGGACGCGTTGGTCTCCGACGACATCCTCC
ACGCAGGCATTCGCGAGGTGATCATGCACGAGGTGGGCCATACCCTGGGC
TTGCGGCATAACTTTAAGGCCTCGTCGGGCGTCACGTGGGAGCAGACGCA
GGACGTGGAGTACACGCAGAAGCACGGCCTCAGCACTTCTGTGATGGACT
ACCTGCCCATGAACCTGGTGAGTGGGCGTGCCGCTGAGACCAATGTCGAT
TATTTTTCTTCCACGATTGGCATTTACGACGTTGCGGCCATAAAGTACGG
ATACACCGAGCTCCCAGACGAAGCGCCTGGTATGCCGCATAAGGTCCTAA
CGGCTCTGGCGGACCAAAATCTCCTCTTCGGAACGGATGAAGACGACGCG
AGTCCTTTGGGCGCCGATCCGTACGTGAACGTCTTCGACTTTACCTCCGA
CCCTGCCGCTTTCTACTTGGATCGCCTGACCTTGGTAGCGGAGCTGAGGG
AGAACCTGCTCGACCGCGTGGTGTTGGAGGGGGATGAGTTTACCCGCTAC
GCAGCCGCAGAAACAACACTCTTGAAGGTAGTCCTCTCGGCAGCAAAGTC
CCTGACGAAATTTATCGGGGGCTACACTGTCAACAGAGCTCGGCGCGCGG
CCCCCGGTGTGGCCCAAGCTCCTCCTTTGGCGGTCTTGAGCCCATCGGAG
CAACAGAGGGCCTTGGCAGGCGTGCTCCAAGTGCTAACAGACGACGAATC
CATCATATTCCCTCAAGCGGAGGCGGTGCAGTGGATGCTCAACAAAGGAG
GAGAATGCTCGGGTTTGTATCAGTATTGCCTGGCTCGCTCCCCCGTGGAC
GTAGTCAAGGCCATAGACGACGGCCGAATATCCCTTTTGACGCATCTCTT
TGCCATCCCACGTTTAGAGCGTCTTCGCACGGCGGAATGGGTGACATCGG
CTTCAGGGGAGGCAGAAAAGAGCTTCGGAGTCGCCGATCTCTTTACGCAA
ACCACTTTAGCCCTCTATGGGGCCGAGCCTGGGGTCTCGGCCCGAGCAGC
CGAGTCCCGCAACTGGAACCTGCAAATATACTGGGTGGAACGTTTGCTGG
AACTAGCAAGCGCGCCCCCCGAGGACCTGTCCAGAGAGGTGGCTGCCTTG
GCGGCGGCCCAACTCTTCAGCATTCAGGAGTCTATGGAGGTGGCCTTGGG
GCCTGATGGCACTGTCACCAAGGACTCCAAAGCCTATCCTTTGCTCCGAA
TTGTCCTGGTAAAGCTTCGTGAAAAAAGCTATGTCAAGGGAGACTCATGA
GGCATCACTTCGAGGAAACATGTCAAATATTAAAACATATAAATAAGCGT
GTGTGGTAGCCGCGATCTCATCTTGACATCCGTGCACGGACAGCTAATTT
AAAGCCAGAATTTGGGGCAAAATAGATATAGGGTCGAAAAAAGACACATT
GCTCCAGACAAATAATTTTATAAACCGGGGCGATCTAAGAAATGCCTAAT
TTCCACCTAGAGGAACAATTTTAAAACTAAAATGAAGAGACGATACAGTT
GCTACGTCCTCGCAGAATGCATCAACCACCACAGATAATAAATTAAAAAA
GGCCTCCGGTCGCTCAAAGACAGTCTTTTTCTCATTT back to topprotein sequence of rna6778 >rna6778-protein ID=rna6778-protein|Name=rna6778|organism=Nannochloropsis gaditana|type=polypeptide|length=155bp
MSRDIMTVGDGFYLRYYVGHKGKFGHEFMEFEINPSGLLRYANNSKYKNA
KMIRKQVYLSQTVLSEFQRIVEESQIVAEDDKDWPEPDRVGKQELEVRLG
ESHIRFTCAKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKI
KPIPT back to topmRNA from alignment at CM002469.1:484150..486364+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6778 ID=rna6778|Name=rna6778|organism=Nannochloropsis gaditana|type=mRNA|length=2215bp|location=Sequence derived from alignment at CM002469.1:484150..486364+ (Nannochloropsis gaditana)
GGCCAATTCTAGGTGTGCGGCAAATGGATGCGGGACTACAGTGTAGTAGT
CGGATGGTGTGGGGTTTTCTTGCTACGAGGGCTCCGGCGGAGGACTGCTT
GCGTGCTCGTATCTGTCATGGAGAGATCGTGTCGGGTCACCACGGACTGT
GGGTTGGATGATGGCGCACGAACGAGAGCGCCGCTGTATGTATAGTACGT
CTTCAAATGGATATGCACGCTTACAGGCCCTTTACTTCCATTTCACCTAC
AAGATGATGTGTTAGCTTGATCTTGGCAGAGTGTGAGTGAGCTTTGATTG
CTTGGCAGTGTGCATCTACATCtcttgcctttccttccacaacATGAGCA
GGGACATCATGACCGTTGGTGACGGATTTTACCTTCGGTACTACGTGGGA
CACAAGGGGAAATTTGGGCACGAATTCATGGAATTCGAAATTAATCCCTC
GGGTCTTTTGAGGTACGCCAATAACTCTAAATACAAGAACGCCAAGATGA
TCCGGAAACAAGGTACGAAAACAGAACAAGGACAGAGATTGTTGATCGCG
AAAGAACTAACAAAGTCCCTTGTTCACAGTATACCTTTCTCAAACTGTAC
TGAGCGAATTTCAACGCATCGTTGAGGAGTCCCAGATCGTGGCGGAAGAT
GATAAAGATTGGCCGGAACCAGACCGGGTCGGGaagcaggagctggaggt
CCGTCTCGGAGAATCCCACATCCGCTTTACCTGCGCCAAGATTGGATCGC
TCCTGGATGTGCAGGACAGCAAAGATCCTGAAGGCCTGAGGATATTTTAT
TATCTCGTTCAAGATTTGCggtgcctcctcttctcattAATCGGTCTGCA
TTTCAAGGTACGTAGGAAGGCGGGATCGTTGTAAGGAAAATTACATTGAA
AGAAACCAGACTTGTTCACGGGCCATGTTGCATTTGGGCAATTGTAATCA
TCCACCACGACTTGGTCTTACTAGATTTTATGAAAGCGAAATCGATTGTC
TGGCTAACGTAGAGTCCTGCTCCCGATCCGCCCTGTCACAGATCAAGCCT
ATCCCTACCTGAGGCCTGCTCAGGCTATCCGTCAAGTCACAGGAAATGCG
ACTGAGTTTGTTGTATTGATGCGAGAGTACCGGGCTCAGACGGTCTACAA
GGTAAAATGAAAAGCAAAATAGAAAACAGAGCCTCCGCCCAAGCGACACA
TCGTCCGCGAGATAGAATGGGATGTTAacttcctttttttaaaacgcTTT
GGGAGACCTTTCGCGCAAAAAGAGAACTTGAAAGGAGTTTGGAATGACCT
ACAACACACACAATAACACGTCTTGACGTCAGGCCGAGATTCACGCAAGC
ACAGCCTTCAGGAGAAATGAAGAAAATATCGCAGATGATTCATCACATGT
GCATACATCTTCGACTGGTTTGTGTAGGCTATGACCATTTGCCGGAGTAC
ATGCCAACATAGACTAACACATAAAGACAcacagggggagaaaggaagac
gtATGACGACTTTCGCTCAAGCATTTGGGTGGATCACGACACAATGAGAA
ACACGTGGCACAGACGCCGCCCCTATACGGGCCACGCACACGCAGTGATT
CTTGTTGTAATCTCATCGATGTTGCATTCTCACATGAGAAAGGAACGGCA
CACAGCTGCTATATCCTCGGGCGAATTACCAGCGATGACACCACCTCCTG
TCGCCTGCCGCTGTCCCattgctcctcctgctcacTTGGACAGGGCAAAA
GTCATCTCCTACCGAGTTATTTCAAAAAAGGGCCAGATAGCATTACAAGA
TGCAATGTGTAACCATATGGTGCGCATGAGAGAAAATTACGGACGTTAAG
TGAGACACGACACACCGACACACACATATCTAAAGCTTACACATTTGCAC
ACGCGTTTTCACATTGATGCCCCACCTCCTGGAGCTCGTACCTTGATTTC
GACGGCCACGTCGCCATCGACGtacgccttccccttcagcTTGGCTATGC
CAAACGACTCCATGAACTTGACCAGTTCCACCTCCATGACCAGAGTGTCC
CCCGGCACCACAGGCTTTCGAAATTTGACCCCATCGATACCTGTGGGTCA
TTTTGCCGGTAGAACGGCCCAATGTATCCTGAGAACGCACGCCAGGACCC
TCAAAAGGTCGTCCGAGGGGCATCCCTGCAAGGCCCTGCACGCCACGCAG
TCATAACCTCATGCG back to topCoding sequence (CDS) from alignment at CM002469.1:484150..486364+ >rna6778 ID=rna6778|Name=rna6778|organism=Nannochloropsis gaditana|type=CDS|length=1404bp|location=Sequence derived from alignment at CM002469.1:484150..486364+ (Nannochloropsis gaditana)
ATGAGCAGGGACATCATGACCGTTGGTGACGGATTTTACCTTCGGTACTA
CGTGGGACACAAGGGGAAATTTGGGCACGAATTCATGGAATTCGAAATTA
ATCCCTCGGGTCTTTTGAGGTACGCCAATAACTCTAAATACAAGAACGCC
AAGATGATCCGGAAACAAGTATACCTTTCTCAAACTGTACTGAGCGAATT
TCAACGCATCGTTGAGGAGTCCCAGATCGTGGCGGAAGATGATAAAGATT
GGCCGGAACCAGACCGGGTCGGGaagcaggagctggaggtCCGTCTCGGA
GAATCCCACATCCGCTTTACCTGCGCCAAGATTGGATCGCTCCTGGATGT
GCAGGACAGCAAAGATCCTGAAGGCCTGAGGATATTTTATTATCTCGTTC
AAGATTTGCggtgcctcctcttctcattAATCGGTCTGCATTTCAAGATC
AAGCCTATCCCTACCTGAATGAGCAGGGACATCATGACCGTTGGTGACGG
ATTTTACCTTCGGTACTACGTGGGACACAAGGGGAAATTTGGGCACGAAT
TCATGGAATTCGAAATTAATCCCTCGGGTCTTTTGAGGTACGCCAATAAC
TCTAAATACAAGAACGCCAAGATGATCCGGAAACAAGTATACCTTTCTCA
AACTGTACTGAGCGAATTTCAACGCATCGTTGAGGAGTCCCAGATCGTGG
CGGAAGATGATAAAGATTGGCCGGAACCAGACCGGGTCGGGaagcaggag
ctggaggtCCGTCTCGGAGAATCCCACATCCGCTTTACCTGCGCCAAGAT
TGGATCGCTCCTGGATGTGCAGGACAGCAAAGATCCTGAAGGCCTGAGGA
TATTTTATTATCTCGTTCAAGATTTGCggtgcctcctcttctcattAATC
GGTCTGCATTTCAAGATCAAGCCTATCCCTACCTGAATGAGCAGGGACAT
CATGACCGTTGGTGACGGATTTTACCTTCGGTACTACGTGGGACACAAGG
GGAAATTTGGGCACGAATTCATGGAATTCGAAATTAATCCCTCGGGTCTT
TTGAGGTACGCCAATAACTCTAAATACAAGAACGCCAAGATGATCCGGAA
ACAAGTATACCTTTCTCAAACTGTACTGAGCGAATTTCAACGCATCGTTG
AGGAGTCCCAGATCGTGGCGGAAGATGATAAAGATTGGCCGGAACCAGAC
CGGGTCGGGaagcaggagctggaggtCCGTCTCGGAGAATCCCACATCCG
CTTTACCTGCGCCAAGATTGGATCGCTCCTGGATGTGCAGGACAGCAAAG
ATCCTGAAGGCCTGAGGATATTTTATTATCTCGTTCAAGATTTGCggtgc
ctcctcttctcattAATCGGTCTGCATTTCAAGATCAAGCCTATCCCTAC
CTGA back to top
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