EWM23902.1, cds6762 (CDS) Nannochloropsis gaditana

Overview
NameEWM23902.1
Unique Namecds6762
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:484493..484661 +
Alignment locationCM002469.1:484729..485006 +
Alignment locationCM002469.1:485191..485211 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23902.1
Productmago nashi
Orig transcript idgnl|cribi|Naga_100113g5.9968.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:484493..484661 +
CM002469.1supercontigCM002469.1:484729..485006 +
CM002469.1supercontigCM002469.1:485191..485211 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR004023Mago_nashi
Homology
[Close]
BLAST of EWM23902.1 vs. NCBI_GenBank
Match: gi|585105184|gb|EWM23902.1| (mago nashi [Nannochloropsis gaditana])

HSP 1 Score: 322.013 bits (824), Expect = 1.839e-111
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0 
Query:    1 MSRDIMTVGDGFYLRYYVGHKGKFGHEFMEFEINPSGLLRYANNSKYKNAKMIRKQVYLSQTVLSEFQRIVEESQIVAEDDKDWPEPDRVGKQELEVRLGESHIRFTCAKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKIKPIPT 155
            MSRDIMTVGDGFYLRYYVGHKGKFGHEFMEFEINPSGLLRYANNSKYKNAKMIRKQVYLSQTVLSEFQRIVEESQIVAEDDKDWPEPDRVGKQELEVRLGESHIRFTCAKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKIKPIPT
Sbjct:    1 MSRDIMTVGDGFYLRYYVGHKGKFGHEFMEFEINPSGLLRYANNSKYKNAKMIRKQVYLSQTVLSEFQRIVEESQIVAEDDKDWPEPDRVGKQELEVRLGESHIRFTCAKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKIKPIPT 155
[Close]
BLAST of EWM23902.1 vs. NCBI_GenBank
Match: gi|553184950|ref|XP_005854176.1| (protein mago nashi [Nannochloropsis gaditana CCMP526] >gi|422294887|gb|EKU22187.1| protein mago nashi [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 299.286 bits (765), Expect = 1.108e-102
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0 
Query:    6 MTVGDGFYLRYYVGHKGKFGHEFMEFEINPSGLLRYANNSKYKNAKMIRKQVYLSQTVLSEFQRIVEESQIVAEDDKDWPEPDRVGKQELEVRLGESHIRFTCAKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFK 149
            MTVGDGFYLRYYVGHKGKFGHEFMEFEINPSGLLRYANNSKYKNAKMIRKQVYLSQTVLSEFQRIVEESQIVAEDDKDWPEPDRVGKQELEVRLGESHIRFTCAKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFK
Sbjct:    1 MTVGDGFYLRYYVGHKGKFGHEFMEFEINPSGLLRYANNSKYKNAKMIRKQVYLSQTVLSEFQRIVEESQIVAEDDKDWPEPDRVGKQELEVRLGESHIRFTCAKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFK 144
[Close]
BLAST of EWM23902.1 vs. NCBI_GenBank
Match: gi|675168169|ref|XP_008892969.1| (hypothetical protein PPTG_01421 [Phytophthora parasitica INRA-310] >gi|566022579|gb|ETI45490.1| hypothetical protein F443_09922 [Phytophthora parasitica P1569] >gi|568106513|gb|ETN21143.1| hypothetical protein PPTG_01421 [Phytophthora parasitica INRA-310])

HSP 1 Score: 236.884 bits (603), Expect = 6.235e-78
Identity = 109/149 (73.15%), Postives = 125/149 (83.89%), Query Frame = 0 
Query:    6 MTVGDGFYLRYYVGHKGKFGHEFMEFEINPSGLLRYANNSKYKNAKMIRKQVYLSQTVLSEFQRIVEESQIVAEDDKDWPEPDRVGKQELEVRLGESHIRFTCAKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKIKPIP 154
            M   D FY+RYYVGH+GKFGHEFMEFE   +G LRYANNS YK   MIRK+V +SQ+V+ E +RI+ +S+I  EDDK+WPEPDRVG+QELEV LG  HI FTCAKIGSLLDVQDSKDPEGLR+ YYLVQDL+CL+FSLI LHFKIKPIP
Sbjct:    1 MPSDDDFYVRYYVGHRGKFGHEFMEFEFRSNGKLRYANNSNYKKDSMIRKEVTVSQSVIDEVKRIISDSEITKEDDKEWPEPDRVGRQELEVVLGNDHISFTCAKIGSLLDVQDSKDPEGLRVLYYLVQDLKCLVFSLITLHFKIKPIP 149
[Close]
BLAST of EWM23902.1 vs. NCBI_GenBank
Match: gi|695414938|ref|XP_009526433.1| (hypothetical protein PHYSODRAFT_314749 [Phytophthora sojae] >gi|348677558|gb|EGZ17375.1| hypothetical protein PHYSODRAFT_314749 [Phytophthora sojae])

HSP 1 Score: 236.498 bits (602), Expect = 8.855e-78
Identity = 109/149 (73.15%), Postives = 125/149 (83.89%), Query Frame = 0 
Query:    6 MTVGDGFYLRYYVGHKGKFGHEFMEFEINPSGLLRYANNSKYKNAKMIRKQVYLSQTVLSEFQRIVEESQIVAEDDKDWPEPDRVGKQELEVRLGESHIRFTCAKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKIKPIP 154
            M   D FY+RYYVGH+GKFGHEFMEFE    G LRYANNS YK   MIRK+V +SQ+V+ E +RI+ +S+I  EDDK+WPEPDRVG+QELEV LG+ HI FTCAKIGSLLDVQDSKDPEGLR+ YYLVQDL+CL+FSLI LHFKIKPIP
Sbjct:    1 MPRDDDFYVRYYVGHRGKFGHEFMEFEFRADGKLRYANNSNYKKDSMIRKEVTVSQSVIDEVKRIISDSEITKEDDKEWPEPDRVGRQELEVVLGDDHISFTCAKIGSLLDVQDSKDPEGLRVLYYLVQDLKCLVFSLITLHFKIKPIP 149
[Close]
BLAST of EWM23902.1 vs. NCBI_GenBank
Match: gi|567959878|gb|ETK85442.1| (hypothetical protein L915_09719 [Phytophthora parasitica] >gi|567988611|gb|ETL38886.1| hypothetical protein L916_09623 [Phytophthora parasitica] >gi|568017814|gb|ETL91991.1| hypothetical protein L917_09546 [Phytophthora parasitica] >gi|568048230|gb|ETM45289.1| hypothetical protein L914_09589 [Phytophthora parasitica] >gi|570326201|gb|ETO74149.1| hypothetical protein F444_10017 [Phytophthora parasitica P1976] >gi|570950057|gb|ETP15314.1| hypothetical protein F441_09871 [Phytophthora parasitica CJ01A1] >gi|570983591|gb|ETP43390.1| hypothetical protein F442_09825 [Phytophthora parasitica P10297])

HSP 1 Score: 236.113 bits (601), Expect = 1.165e-77
Identity = 109/149 (73.15%), Postives = 125/149 (83.89%), Query Frame = 0 
Query:    6 MTVGDGFYLRYYVGHKGKFGHEFMEFEINPSGLLRYANNSKYKNAKMIRKQVYLSQTVLSEFQRIVEESQIVAEDDKDWPEPDRVGKQELEVRLGESHIRFTCAKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKIKPIP 154
            M   D FY+RYYVGH+GKFGHEFMEFE   +G LRYANNS YK   MIRK+V +SQ+V+ E +RI+ +S+I  EDDK+WPEPDRVG+QELEV LG  HI FTCAKIGSLLDVQDSKDPEGLR+ YYLVQDL+CL+FSLI LHFKIKPIP
Sbjct:    1 MPRDDDFYVRYYVGHRGKFGHEFMEFEFRSNGKLRYANNSNYKKDSMIRKEVTVSQSVIDEVKRIISDSEITKEDDKEWPEPDRVGRQELEVVLGNDHISFTCAKIGSLLDVQDSKDPEGLRVLYYLVQDLKCLVFSLITLHFKIKPIP 149
[Close]
BLAST of EWM23902.1 vs. NCBI_GenBank
Match: gi|953502731|emb|CEG50446.1| (protein mago nashi [Plasmopara halstedii])

HSP 1 Score: 236.113 bits (601), Expect = 1.515e-77
Identity = 109/149 (73.15%), Postives = 125/149 (83.89%), Query Frame = 0 
Query:    6 MTVGDGFYLRYYVGHKGKFGHEFMEFEINPSGLLRYANNSKYKNAKMIRKQVYLSQTVLSEFQRIVEESQIVAEDDKDWPEPDRVGKQELEVRLGESHIRFTCAKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKIKPIP 154
            M   D FY+RYYVGH+GKFGHEFMEFE    G LRYANNS YK   MIRK+V +SQ+V++E +RI+ ES+I  E+DKDWPEPDRVG+QELEV L + HI FTCAKIGSLLDVQDSKDPEGLR+ YYLVQDL+CL+FSLI LHFKIKPIP
Sbjct:    1 MPRDDDFYVRYYVGHRGKFGHEFMEFEFRADGKLRYANNSNYKKDSMIRKEVTVSQSVINEVKRIISESEITKENDKDWPEPDRVGRQELEVVLDDDHISFTCAKIGSLLDVQDSKDPEGLRVLYYLVQDLKCLVFSLITLHFKIKPIP 149
[Close]
BLAST of EWM23902.1 vs. NCBI_GenBank
Match: gi|971518453|dbj|GAQ79741.1| (mago nashi family protein [Klebsormidium nitens])

HSP 1 Score: 231.491 bits (589), Expect = 8.188e-76
Identity = 107/142 (75.35%), Postives = 122/142 (85.92%), Query Frame = 0 
Query:   12 FYLRYYVGHKGKFGHEFMEFEINPSGLLRYANNSKYKNAKMIRKQVYLSQTVLSEFQRIVEESQIVAEDDKDWPEPDRVGKQELEVRLGESHIRFTCAKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKIKPI 153
            FY+RYYVGHKGKFGHEF+EFE  P G LRYANNS YKN  MIRK+VY++Q VL E +RI+E+++I+ EDD +WP PDRVGKQELEV L   HI FT AKIGSLLDVQ SKDPEGLR+FYYLVQDL+CL+FSLIGLHFKIKPI
Sbjct:    6 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYVTQAVLDEVRRIIEDAEIMKEDDANWPLPDRVGKQELEVVLKNEHISFTTAKIGSLLDVQSSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI 147
[Close]
BLAST of EWM23902.1 vs. NCBI_GenBank
Match: gi|1150705156|ref|XP_020263323.1| (protein mago nashi homolog [Asparagus officinalis] >gi|1141992273|gb|ONK73493.1| uncharacterized protein A4U43_C04F32190 [Asparagus officinalis])

HSP 1 Score: 230.72 bits (587), Expect = 2.038e-75
Identity = 106/146 (72.60%), Postives = 122/146 (83.56%), Query Frame = 0 
Query:   10 DGFYLRYYVGHKGKFGHEFMEFEINPSGLLRYANNSKYKNAKMIRKQVYLSQTVLSEFQRIVEESQIVAEDDKDWPEPDRVGKQELEVRLGESHIRFTCAKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKIKPIPT 155
            D FYLRYYVGHKGKFGHEF+EFE  P G LRYANNS YKN  MIRK+V+L+  VL E QRI+ ES+I+ EDD +WPEPDRVG+QELE+ +G  HI FT +KIGSL+DVQ SKDPEGLRIFYYLVQDL+C +FSLI LHFKIKPI +
Sbjct:    7 DEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPAVLRECQRIISESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLISLHFKIKPIQS 152
[Close]
BLAST of EWM23902.1 vs. NCBI_GenBank
Match: gi|116781524|gb|ABK22137.1| (unknown [Picea sitchensis] >gi|224285186|gb|ACN40320.1| unknown [Picea sitchensis])

HSP 1 Score: 230.335 bits (586), Expect = 2.453e-75
Identity = 105/142 (73.94%), Postives = 122/142 (85.92%), Query Frame = 0 
Query:   12 FYLRYYVGHKGKFGHEFMEFEINPSGLLRYANNSKYKNAKMIRKQVYLSQTVLSEFQRIVEESQIVAEDDKDWPEPDRVGKQELEVRLGESHIRFTCAKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKIKPI 153
            FY+RYYVGHKGKFGHEF+EFE  P G LRYANNS YKN  MIRK+V+L+Q VL E +RI+ ES+I+ EDD +WPEPDRVG+QELE+ +G  HI FT +KIGSL+DVQ SKDPEGLRIFYYLVQDL+C +FSLIGLHFKIKPI
Sbjct:    8 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRIIAESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLIGLHFKIKPI 149
[Close]
BLAST of EWM23902.1 vs. NCBI_GenBank
Match: gi|698823879|ref|XP_009844968.1| (hypothetical protein H257_17774 [Aphanomyces astaci] >gi|574099887|gb|ETV65480.1| hypothetical protein H257_17774 [Aphanomyces astaci])

HSP 1 Score: 230.335 bits (586), Expect = 2.535e-75
Identity = 106/149 (71.14%), Postives = 122/149 (81.88%), Query Frame = 0 
Query:    6 MTVGDGFYLRYYVGHKGKFGHEFMEFEINPSGLLRYANNSKYKNAKMIRKQVYLSQTVLSEFQRIVEESQIVAEDDKDWPEPDRVGKQELEVRLGESHIRFTCAKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKIKPIP 154
            M+  D FYLRYYVGHKGKFGHE+MEFE+   G LRYANNS YKN  +I+K+V LSQ+V+ E +RI+E S+I+ EDD  WPE DRVGKQELE+     HI FTCAKIGSLLDVQDS DPEGLR+FYYLVQDL+C +FSLI LHFKIKPIP
Sbjct:    1 MSPSDDFYLRYYVGHKGKFGHEYMEFELRADGKLRYANNSNYKNDTLIKKEVTLSQSVIEEVKRIIETSEIIKEDDSKWPESDRVGKQELEIIHNNEHICFTCAKIGSLLDVQDSNDPEGLRVFYYLVQDLKCFVFSLITLHFKIKPIP 149
The following BLAST results are available for this feature:
BLAST of EWM23902.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105184|gb|EWM23902.1|1.839e-111100.00mago nashi [Nannochloropsis gaditana][more]
gi|553184950|ref|XP_005854176.1|1.108e-102100.00protein mago nashi [Nannochloropsis gaditana CCMP5... [more]
gi|675168169|ref|XP_008892969.1|6.235e-7873.15hypothetical protein PPTG_01421 [Phytophthora para... [more]
gi|695414938|ref|XP_009526433.1|8.855e-7873.15hypothetical protein PHYSODRAFT_314749 [Phytophtho... [more]
gi|567959878|gb|ETK85442.1|1.165e-7773.15hypothetical protein L915_09719 [Phytophthora para... [more]
gi|953502731|emb|CEG50446.1|1.515e-7773.15protein mago nashi [Plasmopara halstedii][more]
gi|971518453|dbj|GAQ79741.1|8.188e-7675.35mago nashi family protein [Klebsormidium nitens][more]
gi|1150705156|ref|XP_020263323.1|2.038e-7572.60protein mago nashi homolog [Asparagus officinalis]... [more]
gi|116781524|gb|ABK22137.1|2.453e-7573.94unknown [Picea sitchensis] >gi|224285186|gb|ACN403... [more]
gi|698823879|ref|XP_009844968.1|2.535e-7571.14hypothetical protein H257_17774 [Aphanomyces astac... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6778rna6778Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications