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Properties
| Property Name | Value |
|---|
| Product | Metallopeptidase, catalytic domain protein |
| Orig transcript id | gnl|cribi|Naga_100113g4.9976.mrna |
| Orig protein id | gnl|cribi|Naga_100113g4.9976 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:479891..483477 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6777 ID=rna6777|Name=rna6777|organism=Nannochloropsis gaditana|type=mRNA|length=1752bp
ACCGCACAGGAACGTCCTCGCTTTAAATTCCTTGGCGATCACTACTAGTG
CTTGCAGCACCTCGAAATGCAGTGCCTGCCTAGTCGCCTGCGCTTGACTG
AATATCGTCCCTTACACCCCCCATATTATGCCGATAGCAGTGACCTTCCG
CAAACATCATAAATTATTAGCCATTATGAAGCCGCCGACGGTGCTTGTTA
AGGCACGGTGTCTCTTCCGGTACCGCTCTCCGATGCTTCAACTGCTCTCA
CGGACATGTAGAGCAGGAAATTCCTCTTCCTCCTCCTTGCCTTATTCTAC
TGGCGCTAAAGCTTCGACGAGCCCTTTCGAGAGAAGTCTGTTTCAGTACA
AGGACTACTTGAAACGAGAGCTGGCAAGATTTGATCCTGATGTTCCGATC
GAGTTAGCCTCTACCCCTCCCGCCTCCTGGTTCACTGACCCGGCCTTTCA
CACCCTGGAGATGGCAAGCATTTTCTCCGATAACCCCCTGTGCGTCGGCA
GTACTCTTCAAATACCACTACCTGGCGACTATTTTTGCGGACAAGTGGGC
TCCCATCCTTTTATTGTACTGCGGGAGGCATCTGGGAATGTGAAAGCTTT
CTACAATGTCTGTCGACATAAAGGCATGCGTCTGGTGGCGGAGGACGCGG
GTCGCGTGGGGCAAACCGTTCTCACCTGTCCGTATCACGGATGGGAATAT
CGCTTGGACGGACGACTGGCCAAGGCGACGCGTGTGGCAGGCATACGTGA
CTTTGCCCCTAAGGACTACGGGCTCCTGGAGATTCCTCTCTGGACGTGGG
GGCCTCTGGTCTTCCTCCGCTTCGGGCAGGCTGAAAACGAGGCACCTCAC
GTGGTTGGGAAGGACGGAAGTCACCCCCTGGCGTACTTGGAGCCCCTGCT
AGAACGCCTGGATGCCGAGCACGGTTTCAGCTCAGGATTGCGGCATGTCC
GCCGACGGCGATACCGAGTCCAGTGCAACCACAAGGTGGTAAGCGACAAC
TATTTGGACAACGGCTATCACGTTCCCTACGCGCACAAAGCCCTGGGGAA
TGCCCTTGACCTCTCCTCTTATGGAGCTTCCGTTCACGACCGATACTCCG
TCCAGGCCTGTCGCGGAGCGCCCTCCACCTCCTCCCCCTCCTTCCCCCCT
TCCACGTCCGCCTTTTCCTCGTCTTCTCCCTTTCCTCCTCGTATCAGCCC
CAATCATGGAGGGGGAAGTGCAACGCGCCTGGGTAAGGCCGCCCTTTACG
CACACATTTACCCTGGGCTCATGCTCAACCGCTACGGCCCATGGATGGAC
CTGAACATCCTCTTTCCCGTCTCCTCCTCCTCCTGCGACCTCATTTTCGA
TTACTTCCTGGAAGAAACTTTCATTGCCGAAAAGTTGGAAAAGGACGGGG
AGGCTGGCTTGCGCACGTACGTGGAAGAGTCCCTGATAGCCTCGGACGAG
GTACAGCGAGAGGACACCTACCTGTGCGAGAATGTTCAGGCGGGGCTTGA
ATCGGGCGGGTATGACAGGGGAAGGTATGCGCCGAGAGTGGAGTTTTTGG
ATCACGTTTTTCATCAATGGCTGGCGCAGGACCTGCGGGCGGCAGTAGGG
AAGATACAGGGCAGGGAGGGGACACATAGGCCGAGGTGGGGGAAAAGAGG
GAGAATGCTGTGAAGCGCCAAAAAGCGTGGTATTTGTAAGATGACAGCAA
AATAAAAACCACTTTAGGCAAACATCCATGAAGGACAGCCGAGAAAGAAA
GC back to topprotein sequence of rna6777 >rna6777-protein ID=rna6777-protein|Name=rna6777|organism=Nannochloropsis gaditana|type=polypeptide|length=978bp
METLNDMELQTGYETPRPTVQDRLKRWWEEIRAEWRILGVFLLLIVICFL
LADLDLSVHLQTMSEGKVMSYPMLKEAFDKHPSFFDFYTLPSDDESLILE
MPKAFFNQTPSRPVIFSATFARGAWDDSSSLLLLHEPAEATDHVVFTFNI
TSDGSGIDVFREQYGVRTSSPDYAMPVELGALSLRVGTLPIVIDHHGSSD
DEEGSYVVDASGLIENGFYITDVTGAEDARLRLDLSRSFPENLDITAEYL
LPLDPSDPASPKVSETISFSMALLPERPLVARALDERIGFFSIGYQDVGD
HRHDPNVTASHKHLADRVDTKVKIINRRRLSSGANESAITYYIDPTVPKQ
WRESFRQGVEAWRPAFQAAGFGPAAIRAILPNESGWPDDYQVGDLRYSTI
SWVVDMDTTFALGPSVVDPRSGEILKSDIIFTHGWVKHWISYMEMMDSSK
NPAQSATGLDALDPAREAADLQRLLGVDHGGQREHSHEHKHGHDHGNDHD
PVRTLAGRPWTRMHPSRRTTLRHAHRHGRCQEARAKYDLSPKLALLAREL
AGKDALVSDDILHAGIREVIMHEVGHTLGLRHNFKASSGVTWEQTQDVEY
TQKHGLSTSVMDYLPMNLVSGRAAETNVDYFSSTIGIYDVAAIKYGYTEL
PDEAPGMPHKVLTALADQNLLFGTDEDDASPLGADPYVNVFDFTSDPAAF
YLDRLTLVAELRENLLDRVVLEGDEFTRYAAAETTLLKVVLSAAKSLTKF
IGGYTVNRARRAAPGVAQAPPLAVLSPSEQQRALAGVLQVLTDDESIIFP
QAEAVQWMLNKGGECSGLYQYCLARSPVDVVKAIDDGRISLLTHLFAIPR
LERLRTAEWVTSASGEAEKSFGVADLFTQTTLALYGAEPGVSARAAESRN
WNLQIYWVERLLELASAPPEDLSREVAALAAAQLFSIQESMEVALGPDGT
VTKDSKAYPLLRIVLVKLREKSYVKGDS back to topmRNA from alignment at CM002469.1:479891..483477- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna6777 ID=rna6777|Name=rna6777|organism=Nannochloropsis gaditana|type=mRNA|length=3587bp|location=Sequence derived from alignment at CM002469.1:479891..483477- (Nannochloropsis gaditana)
TTCACAGGCGGTTTCAATCATTGAGAACCTAGAAGAAGGATCTTTAGCCA
ATAGGGCTTCCGCTGCCTCTCCTCCTCCATACGTTCCAATTAGCCCTGAT
AGCGAAACAACTGACTTAAGCGAAGGCGAGCCGGCGGGTGCGTTAACCAC
GGCAACAGTGGCGGATCCTACTCAGTGCCTGGGAGTCCTACACTCGCCCG
CGGGTGGACAGACCTCTTTCCCTACATCTGCTTCTCCGAATCGTAGATCG
GCAGCTGCTCCGCCAAGTTACGAAGAGTACGGTCGCGTGACACGCGCATT
ATCTTCCCCAGTCATGGAAACCTTAAATGACATGGAATTGCAGACAGGCT
ACGAGACCCCTCGGCCCACTGTGCAAGACCGTCTCAAACGATGGTGGGAG
GAAATACGCGCTGAGTGGCGTATTCTGGGTGTCTTTCTTCTGTTGATTGT
CATCTGCTTCCTCCTCGCAGATCTCGACTTGAGTGTGCATTTGCAGACGA
TGTCGGAGGGCAAGGTCATGTCTTATCCCATGCTCAAAGAGGCGTTCGAC
AAGCACCCAAGCTTCTTCGATTTCTACACCTTACCTTCGGATGATGAATC
CCTGATTCTGGAAATGCCTAAGGCTTTTTTCAACCAAACTCCCTCAAGAC
CTGTCATCTTTAGCGCCACTTTCGCCCGCGGAGCCTGGGATGACTCCTCC
AGCCTCTTACTCCTCCACGAACCCGCCGAGGCCACGGACCACGTTGTCTT
TACTTTCAACATCACGTCTGATGGCTCTGGCATAGACGTGTTCCGAGAAC
AGTATGGCGTGCGGACCAGCAGCCCGGACTACGCCATGCCGGTAGAGCTC
GGGGCCCTGTCATTGCGCGTGGGGACCTTGCCCATTGTGATTGACCACCA
TGGCTCCAGTGACGACGAGGAAGGAAGCTACGTAGTAGATGCCTCAGGTT
TGATTGAGAACGGCTTCTACATCACAGACGTGACAGGTGCGGAAGACGCT
AGGCTGCGCTTGGACCTGAGCCGGTCCTTCCCCGAGAACCTGGACATCAC
GGCCGAGTACCTCCTTCCTCTCGACCCCTCTGACCCGGCGTCGCCCAAGG
TCAGTGAGACGATTAGTTTTTCCATGGCTCTACTGCCTGAGAGGCCTCTC
GTGGCCCGCGCGTTGGACGAACGCATTGGTTTCTTCTCCATCGGCTACCA
GGACGTGGGCGACCATCGCCACGACCCCAACGTGACGGCCTCGCACAAGC
ATTTGGCCGACCGTGTGGACACCAAGGTTAAGATCATCAATCGCCGCCGT
CTCTCTTCAGGCGCGAATGAAAGCGCCATCACGTACTACATCGACCCCAC
GGTGCCGAAACAGTGGCGGGAGTCATTTCGGCAGGGCGTAGAGGCCTGGC
GTCCGGCTTTCCAAGCTGCTGGCTTCGGCCCAGCGGCCATTCGAGCCATT
CTACCCAACGAAAGCGGCTGGCCAGACGATTATCAGGTGGGAGACCTGCG
GTATTCCACCATCAGTTGGGTTGTCGATATGGATACCACCTTCGCGCTGG
GCCCGTCCGTGGTAGACCCGCGTTCGGGCGAAATCTTGAAGTCGGACATC
ATCTTCACGCACGGATGGGTCAAGCACTGGATCTCATACATGGAAATGAT
GGACAGCTCTAAGAATCCTGCCCAGTCCGCCACGGGCCTCGATGCGCTAG
ACCCCGCTCGGGAGGCAGCAGATCTGCAGCGACTGCTCGGCGTGGACCAC
GGAGGGCAACGCGAACACAGCCACGAGCACAAGCATGGCCACGACCATGG
GAACGACCACGATCCAGTGAGGACCTTGGCAGGCCGACCCTGGACTCGAA
TGCACCCTTCCCGGCGGACCACGCTCAGGCACGCGCACCGGCATGGACGA
TGTCAGGAGGCGAGGGCGAAGTATGACTTGTCACCCAAGTTAGCTTTACT
GGCCCGAGAGCTGGCGGGCAAGGACGCGTTGGTCTCCGACGACATCCTCC
ACGCAGGCATTCGCGAGGTGATCATGCACGAGGTGGGCCATACCCTGGGC
TTGCGGCATAACTTTAAGGCCTCGTCGGGCGTCACGTGGGAGCAGACGCA
GGACGTGGAGTACACGCAGAAGCACGGCCTCAGCACTTCTGTGATGGACT
ACCTGCCCATGAACCTGGTGAGTGGGCGTGCCGCTGAGACCAATGTCGAT
TATTTTTCTTCCACGATTGGCATTTACGACGTTGCGGCCATAAAGTACGG
ATACACCGAGCTCCCAGACGAAGCGCCTGGTATGCCGCATAAGGTCCTAA
CGGCTCTGGCGGACCAAAATCTCCTCTTCGGAACGGATGAAGACGACGCG
AGTCCTTTGGGCGCCGATCCGTACGTGAACGTCTTCGACTTTACCTCCGA
CCCTGCCGCTTTCTACTTGGATCGCCTGACCTTGGTAGCGGAGCTGAGGG
AGAACCTGCTCGACCGCGTGGTGTTGGAGGGGGATGAGTTTACCCGCTAC
GCAGCCGCAGAAACAACACTCTTGAAGGTAGTCCTCTCGGCAGCAAAGTC
CCTGACGAAATTTATCGGGGGCTACACTGTCAACAGAGCTCGGCGCGCGG
CCCCCGGTGTGGCCCAAGCTCCTCCTTTGGCGGTCTTGAGCCCATCGGAG
CAACAGAGGGCCTTGGCAGGCGTGCTCCAAGTGCTAACAGACGACGAATC
CATCATATTCCCTCAAGCGGAGGCGGTGCAGTGGATGCTCAACAAAGGAG
GAGAATGCTCGGGTTTGTATCAGTATTGCCTGGCTCGCTCCCCCGTGGAC
GTAGTCAAGGCCATAGACGACGGCCGAATATCCCTTTTGACGCATCTCTT
TGCCATCCCACGTTTAGAGCGTCTTCGCACGGCGGAATGGGTGACATCGG
CTTCAGGGGAGGCAGAAAAGAGCTTCGGAGTCGCCGATCTCTTTACGCAA
ACCACTTTAGCCCTCTATGGGGCCGAGCCTGGGGTCTCGGCCCGAGCAGC
CGAGTCCCGCAACTGGAACCTGCAAATATACTGGGTGGAACGTTTGCTGG
AACTAGCAAGCGCGCCCCCCGAGGACCTGTCCAGAGAGGTGGCTGCCTTG
GCGGCGGCCCAACTCTTCAGCATTCAGGAGTCTATGGAGGTGGCCTTGGG
GCCTGATGGCACTGTCACCAAGGACTCCAAAGCCTATCCTTTGCTCCGAA
TTGTCCTGGTAAAGCTTCGTGAAAAAAGCTATGTCAAGGGAGACTCATGA
GGCATCACTTCGAGGAAACATGTCAAATATTAAAACATATAAATAAGCGT
GTGTGGTAGCCGCGATCTCATCTTGACATCCGTGCACGGACAGCTAATTT
AAAGCCAGAATTTGGGGCAAAATAGATATAGGGTCGAAAAAAGACACATT
GCTCCAGACAAATAATTTTATAAACCGGGGCGATCTAAGAAATGCCTAAT
TTCCACCTAGAGGAACAATTTTAAAACTAAAATGAAGAGACGATACAGTT
GCTACGTCCTCGCAGAATGCATCAACCACCACAGATAATAAATTAAAAAA
GGCCTCCGGTCGCTCAAAGACAGTCTTTTTCTCATTT back to topCoding sequence (CDS) from alignment at CM002469.1:479891..483477- >rna6777 ID=rna6777|Name=rna6777|organism=Nannochloropsis gaditana|type=CDS|length=2937bp|location=Sequence derived from alignment at CM002469.1:479891..483477- (Nannochloropsis gaditana)
ATGGAAACCTTAAATGACATGGAATTGCAGACAGGCTACGAGACCCCTCG
GCCCACTGTGCAAGACCGTCTCAAACGATGGTGGGAGGAAATACGCGCTG
AGTGGCGTATTCTGGGTGTCTTTCTTCTGTTGATTGTCATCTGCTTCCTC
CTCGCAGATCTCGACTTGAGTGTGCATTTGCAGACGATGTCGGAGGGCAA
GGTCATGTCTTATCCCATGCTCAAAGAGGCGTTCGACAAGCACCCAAGCT
TCTTCGATTTCTACACCTTACCTTCGGATGATGAATCCCTGATTCTGGAA
ATGCCTAAGGCTTTTTTCAACCAAACTCCCTCAAGACCTGTCATCTTTAG
CGCCACTTTCGCCCGCGGAGCCTGGGATGACTCCTCCAGCCTCTTACTCC
TCCACGAACCCGCCGAGGCCACGGACCACGTTGTCTTTACTTTCAACATC
ACGTCTGATGGCTCTGGCATAGACGTGTTCCGAGAACAGTATGGCGTGCG
GACCAGCAGCCCGGACTACGCCATGCCGGTAGAGCTCGGGGCCCTGTCAT
TGCGCGTGGGGACCTTGCCCATTGTGATTGACCACCATGGCTCCAGTGAC
GACGAGGAAGGAAGCTACGTAGTAGATGCCTCAGGTTTGATTGAGAACGG
CTTCTACATCACAGACGTGACAGGTGCGGAAGACGCTAGGCTGCGCTTGG
ACCTGAGCCGGTCCTTCCCCGAGAACCTGGACATCACGGCCGAGTACCTC
CTTCCTCTCGACCCCTCTGACCCGGCGTCGCCCAAGGTCAGTGAGACGAT
TAGTTTTTCCATGGCTCTACTGCCTGAGAGGCCTCTCGTGGCCCGCGCGT
TGGACGAACGCATTGGTTTCTTCTCCATCGGCTACCAGGACGTGGGCGAC
CATCGCCACGACCCCAACGTGACGGCCTCGCACAAGCATTTGGCCGACCG
TGTGGACACCAAGGTTAAGATCATCAATCGCCGCCGTCTCTCTTCAGGCG
CGAATGAAAGCGCCATCACGTACTACATCGACCCCACGGTGCCGAAACAG
TGGCGGGAGTCATTTCGGCAGGGCGTAGAGGCCTGGCGTCCGGCTTTCCA
AGCTGCTGGCTTCGGCCCAGCGGCCATTCGAGCCATTCTACCCAACGAAA
GCGGCTGGCCAGACGATTATCAGGTGGGAGACCTGCGGTATTCCACCATC
AGTTGGGTTGTCGATATGGATACCACCTTCGCGCTGGGCCCGTCCGTGGT
AGACCCGCGTTCGGGCGAAATCTTGAAGTCGGACATCATCTTCACGCACG
GATGGGTCAAGCACTGGATCTCATACATGGAAATGATGGACAGCTCTAAG
AATCCTGCCCAGTCCGCCACGGGCCTCGATGCGCTAGACCCCGCTCGGGA
GGCAGCAGATCTGCAGCGACTGCTCGGCGTGGACCACGGAGGGCAACGCG
AACACAGCCACGAGCACAAGCATGGCCACGACCATGGGAACGACCACGAT
CCAGTGAGGACCTTGGCAGGCCGACCCTGGACTCGAATGCACCCTTCCCG
GCGGACCACGCTCAGGCACGCGCACCGGCATGGACGATGTCAGGAGGCGA
GGGCGAAGTATGACTTGTCACCCAAGTTAGCTTTACTGGCCCGAGAGCTG
GCGGGCAAGGACGCGTTGGTCTCCGACGACATCCTCCACGCAGGCATTCG
CGAGGTGATCATGCACGAGGTGGGCCATACCCTGGGCTTGCGGCATAACT
TTAAGGCCTCGTCGGGCGTCACGTGGGAGCAGACGCAGGACGTGGAGTAC
ACGCAGAAGCACGGCCTCAGCACTTCTGTGATGGACTACCTGCCCATGAA
CCTGGTGAGTGGGCGTGCCGCTGAGACCAATGTCGATTATTTTTCTTCCA
CGATTGGCATTTACGACGTTGCGGCCATAAAGTACGGATACACCGAGCTC
CCAGACGAAGCGCCTGGTATGCCGCATAAGGTCCTAACGGCTCTGGCGGA
CCAAAATCTCCTCTTCGGAACGGATGAAGACGACGCGAGTCCTTTGGGCG
CCGATCCGTACGTGAACGTCTTCGACTTTACCTCCGACCCTGCCGCTTTC
TACTTGGATCGCCTGACCTTGGTAGCGGAGCTGAGGGAGAACCTGCTCGA
CCGCGTGGTGTTGGAGGGGGATGAGTTTACCCGCTACGCAGCCGCAGAAA
CAACACTCTTGAAGGTAGTCCTCTCGGCAGCAAAGTCCCTGACGAAATTT
ATCGGGGGCTACACTGTCAACAGAGCTCGGCGCGCGGCCCCCGGTGTGGC
CCAAGCTCCTCCTTTGGCGGTCTTGAGCCCATCGGAGCAACAGAGGGCCT
TGGCAGGCGTGCTCCAAGTGCTAACAGACGACGAATCCATCATATTCCCT
CAAGCGGAGGCGGTGCAGTGGATGCTCAACAAAGGAGGAGAATGCTCGGG
TTTGTATCAGTATTGCCTGGCTCGCTCCCCCGTGGACGTAGTCAAGGCCA
TAGACGACGGCCGAATATCCCTTTTGACGCATCTCTTTGCCATCCCACGT
TTAGAGCGTCTTCGCACGGCGGAATGGGTGACATCGGCTTCAGGGGAGGC
AGAAAAGAGCTTCGGAGTCGCCGATCTCTTTACGCAAACCACTTTAGCCC
TCTATGGGGCCGAGCCTGGGGTCTCGGCCCGAGCAGCCGAGTCCCGCAAC
TGGAACCTGCAAATATACTGGGTGGAACGTTTGCTGGAACTAGCAAGCGC
GCCCCCCGAGGACCTGTCCAGAGAGGTGGCTGCCTTGGCGGCGGCCCAAC
TCTTCAGCATTCAGGAGTCTATGGAGGTGGCCTTGGGGCCTGATGGCACT
GTCACCAAGGACTCCAAAGCCTATCCTTTGCTCCGAATTGTCCTGGTAAA
GCTTCGTGAAAAAAGCTATGTCAAGGGAGACTCATGA back to top
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