Naga_100113g4, gene6551 (gene) Nannochloropsis gaditana

Overview
NameNaga_100113g4
Unique Namegene6551
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:479891..483477 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100113g4
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:479891..483477 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL035ngnoL035Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G02150NO16G02150Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6777rna6777-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6777rna6777Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6777

>rna6777-protein ID=rna6777-protein|Name=rna6777|organism=Nannochloropsis gaditana|type=polypeptide|length=978bp
METLNDMELQTGYETPRPTVQDRLKRWWEEIRAEWRILGVFLLLIVICFL
LADLDLSVHLQTMSEGKVMSYPMLKEAFDKHPSFFDFYTLPSDDESLILE
MPKAFFNQTPSRPVIFSATFARGAWDDSSSLLLLHEPAEATDHVVFTFNI
TSDGSGIDVFREQYGVRTSSPDYAMPVELGALSLRVGTLPIVIDHHGSSD
DEEGSYVVDASGLIENGFYITDVTGAEDARLRLDLSRSFPENLDITAEYL
LPLDPSDPASPKVSETISFSMALLPERPLVARALDERIGFFSIGYQDVGD
HRHDPNVTASHKHLADRVDTKVKIINRRRLSSGANESAITYYIDPTVPKQ
WRESFRQGVEAWRPAFQAAGFGPAAIRAILPNESGWPDDYQVGDLRYSTI
SWVVDMDTTFALGPSVVDPRSGEILKSDIIFTHGWVKHWISYMEMMDSSK
NPAQSATGLDALDPAREAADLQRLLGVDHGGQREHSHEHKHGHDHGNDHD
PVRTLAGRPWTRMHPSRRTTLRHAHRHGRCQEARAKYDLSPKLALLAREL
AGKDALVSDDILHAGIREVIMHEVGHTLGLRHNFKASSGVTWEQTQDVEY
TQKHGLSTSVMDYLPMNLVSGRAAETNVDYFSSTIGIYDVAAIKYGYTEL
PDEAPGMPHKVLTALADQNLLFGTDEDDASPLGADPYVNVFDFTSDPAAF
YLDRLTLVAELRENLLDRVVLEGDEFTRYAAAETTLLKVVLSAAKSLTKF
IGGYTVNRARRAAPGVAQAPPLAVLSPSEQQRALAGVLQVLTDDESIIFP
QAEAVQWMLNKGGECSGLYQYCLARSPVDVVKAIDDGRISLLTHLFAIPR
LERLRTAEWVTSASGEAEKSFGVADLFTQTTLALYGAEPGVSARAAESRN
WNLQIYWVERLLELASAPPEDLSREVAALAAAQLFSIQESMEVALGPDGT
VTKDSKAYPLLRIVLVKLREKSYVKGDS
back to top
Synonyms
Publications