|
|
Properties
| Property Name | Value |
|---|
| Product | serine threonine-protein phosphatase pp1 |
| Orig transcript id | gnl|cribi|Naga_101004g2.5518.mrna |
| Orig protein id | gnl|cribi|Naga_101004g2.5518 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:474731..476248 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6774 ID=rna6774|Name=rna6774|organism=Nannochloropsis gaditana|type=mRNA|length=2257bp
GGCACATGGTTTCCCTTTTAATGCCGCCCATGGCCTCCCCCTTGGCGCGT
TCCCAAGAGGAGATCAAGGATACCCTGGGCGACGCGGACCCTGCGTCCCA
CGTCCTTGCCCACGCTGCGGCTCGGGAGCTAGTCTCTAGCGGAGGTGTCC
GGGAGGAGTGCTGGGTGATCAAGCCGCTCAGCGAGCGCATGGCACAAGAG
CTGCAGGACCCCGTTGCACTCGCAACCCAGCAATTGCCAGGGTGGTGCGA
CCAGCTCTTGCGGTATGGCCCATTTTTGCTGCAATTTCGCGTCCGGAAAG
AGTACTTTCACCTATCCAGTTTCGGGCTGGGTCGTGCTGTACACCGTCTT
CTGCAACAGCAACGACAAGGGATGGATGGGCAAGGGGGAGGGGGAGGCGG
GGGAGGGGAAGGGGGGGGGACAGGGCGGCATGCTTCCCACGGTCATTCAC
ACCAGGGAAGCCACCACCACCACCATCATCATCAGTATCGTCGCGCCCCC
ACCTCTGCCGTGCAGCAGCTCAAGGTACAGGTGTCGCGCCGGAAGCTCCT
GGCCTCGGCGGAGAAAGTCTTGGAGGAACACGGGTCCCGGCGGGTCTTGC
TGGAAACCGAGTTCTTCAACGAGCCTGGCACGGGCTCCGGCCCGACGGCC
GAGTTCTTTTCCCTGGTCTCCAAGGAGATGCGGAGCCCAAACTTGGGCTT
GTGGCGCGGGGAAAGCCATCATGATGGACTGTACCCACAGCCTTGGTCGG
ACCCAACGGGGGGCTCGGAGGAAAGGATGAAAGACCAAAAAGGAGGGGGG
GGAAGGCCAGAGGGGGGCCGGGGGCAGAAATTGCGTCAATTTGCGTGTTT
GGGCAGACTTATCGGCCAAGCCCTTTTGGATGAACGGCTCCTTGATATTC
GCTTCGCAGCCCCCCTGGTTGCTACCTTGGCCGGGCGGCAGGCTTCGCAA
TCCTTGCCGGCGGCCTTGGAGGAGATGGAGCGGGTCGATTCGGCCCTGGC
GCGACAGTTGCAGGCGCTGGCGGCCTCGACTGGACTTGCGCAGTGGTTTG
AAGCACCGGAAAGCGGGCAGCGAAGCGAGCGGCAGGAGCAGGAGGTCGGG
CCCGGGAAGATTGTGAGGGAGAGCGCGGATGCGGACGAGAGGGTGTCGGC
TTTGTGCCTGACGTTCTGCCTCCCAGGTGAGCCGGAGATCGGGTTGCTCG
GACCCTCAGGGGTGCCAGTCAAGCCGGGTGTAGAAGGTCTTAGGTCAGAC
GGCGGCCTGGGAGAGGATGTGACGCGTCAGAATCTTGGCCTCTACGTCCA
GCGCGTGCTTCAAGTCGGCCTCAGGGAGGCGGTCCGTCCCCAGGTAACTG
CCATGTTGACGGGCCTCCAGGACATCGTGCCGACAGGGGCGCTCTGGGTC
TTCACGGAGGAGGAAATAATGGCGATGGTGGGGGGGGTGGGGTCGGAGAT
GGGAAAGGACCCGGAGGAGATCCTGGAGGCCTTGGCCTGCGACCACGGAT
ACACCCGAGGGAGCCAGGCGGTGCGGTGGCTGGTGGAGATATTGGCCGAG
ATGACCCTTGAGGAGGAGCGTCATTTCCTCATGTTCGTGACGGGTAGCCC
CGGGCTGCCTGTTGGTGGCTTGATGGGGTGCTGCCCGCGCTTGACTGTGG
TGAAGAAGGTGGCGGAGGGACACGCGAGAGCCTTGGGGCAGGCGGGCGTG
GATGCCATGCTGCCGAGCGCGTCCACGTGCACAAATTACTTGAAATTACC
GGACTACTCGAGTCGGGCGGTGATGCGAGAGCGTTTGTTGCTGAGCCTGA
GGCATGGGCAGCATTCCTTTCACCTATCATGAGCAGTGGGTCCTGCCAGG
GCATCCGGAGGGTTGGCGACTAACAGGAAGGAGTGGCCCCATATCCACGT
CGGGAGACGACGGGAGTGTAAACCTGTGATTAGTTATAAGAAGCATACCG
CTGGCTGTTGAAGGCCTGTCGTGTACAGCTGCAGTACTGGCCCTGTGGCG
GTGCGAACAACGCGTGGGGGGACAGTGGGCACATCGTGGGGACGGCAAAC
CTCGAGGCCTACGCTCAGGGATGAGCATGTGTATGGGGTTCATAGGCGAG
CAAATAGGATAGTCAAAGAGGTTTCGGGCATGAAAGATTTTAAAGAAGCG
AATAGACTAATTGGCGCGGTTCCTTCTTGATTATCTTGGGCGGCATCTGA
TGTTGTAAGAGTCTTGCACCAAAGAATATCGCTGACAAGAGCATGAAGGA
CGCTATC back to topprotein sequence of rna6774 >rna6774-protein ID=rna6774-protein|Name=rna6774|organism=Nannochloropsis gaditana|type=polypeptide|length=289bp
MVNGTFWACALPGQRHPRILGAASESFEAERARTPRVRAGAATACCPAFH
PRYPTLMSTATTNAAGGSVEGMSEVDGIIEKLLTVRGARPGKPVQLLESE
IRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPN
ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIY
GFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLE
EIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDNDPRP back to topmRNA from alignment at CM002469.1:474731..476248+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6774 ID=rna6774|Name=rna6774|organism=Nannochloropsis gaditana|type=mRNA|length=1518bp|location=Sequence derived from alignment at CM002469.1:474731..476248+ (Nannochloropsis gaditana)
ATGGTGAATGGCACGTTTTGGGCATGTACGGGAGCGTCCTTACCGTagag
gtggtggaagtgCGGGTCCGATCGCGTATGCCGAAAAGCAAGCTTGCCTa
tggcctcgtccgccttaTGACCAGGGTCGATTAGGGCAAGATTCTCCCGA
CAGTCTGCCCCTTCTCGAGTTCTTCGCCCTCATTGCTTGATTCTTACACC
CCGCGCACCCAGGTGCCTTGCCAGGCCAGAGGCATCCTCGTATTCTCGGT
GCCGCCTCCGAGTCTTTCGAGGCTGAGCGCGCGAGAACCCCACGCGTTCG
GGCTGGTGCTGCTACAGCCTGCTGCCCCGCTTTCCATCCAAGATATCCGA
CTCTAATGTCAACAGCTACAACAAatgcagcaggaggaagtgTAGAAGGG
ATGTCTGAAGTGGATGGTATCATTGAAAAACTCCTTACCGTCCGTGGGGC
CAGGCCCGGGAAACCCGTGCAGCTCCTGGAGTCGGAGATCCGCATGTTGT
GTAATAAATCGAAGGACGTGTTTATGGAGCAATCGATGCTTTTGGAGCTA
GAGGCACCCATTAAGATTTGCGGCGATATTCACGGGCAGTACTATGATTT
GTTGCGGCTGTTCGAGTATGGCGGATTTCCTCCCAATGCCAACTACTTGT
TCCTAGGGTGAGAACgacgggagggcgacagggaAAGTCACAGGGTCATG
AAGAGTACAAGGAGAGCATGGATGTATGGAGATCATAGGCATGCATAAGT
GTTGCACTCTCTTGCCGGCAGAGAGTAATCGTCtcaccacgtcctcgctt
TTCACGCTGCTATTTATCTCCCtaccccgtccttcccagtGACTATGTGG
ACCGTGGGAAGCAGTCTTTGGAAACAAtctgtcttctcctcgcctacAAA
ATCAAGTATCCGGAGAACTTCTTCATTCTCCGCGGAAACCACGAGTGCGC
CTCTATCAACCGGATCTACGGCTTCTACGACGAATGCAAACGCCGATACA
ACATCAAGCTATGGAAGGTACGGGCTTTTGATTGCCACGTCTTGTGTTTT
GTCGGAAGCAAGGTCCCCGGCGGATGGCAATTCTCTTGTTCCTTTATAgg
tctttctctcttctcgctctcttttcccgccctgcctcggCGGCCTACGT
CCCGTCCGAAGGTCCGGCTCTCTTTCATACGGTGTCTTGAGAATGGTCAA
GCTCAGACTACCtgctgctcccctccctctcgctcccgcACAGACATTCA
CGGACTGCTTCAACTGcctccccatcgccgccgTCATCGATGAGAAGATC
TTTTGCATGCACGGGGGCCTCTCCCCGGAGCTTACCTCGTTGGAGGAGAT
TAAGGATATAATGCGGCCCACGGACGTGCCAGACACGGGGCTGCTCTGCG
ACTTGCTGTGGGCGGACCCCGACAAAGACATCATGGGTTGGGGAGACAAT
GACCGTGGCGTCTCGTACACGttcggggaggacgtggcggccaGCTTCTT
GAAGCAGCACGACCTTGA back to topCoding sequence (CDS) from alignment at CM002469.1:474731..476248+ >rna6774 ID=rna6774|Name=rna6774|organism=Nannochloropsis gaditana|type=CDS|length=4350bp|location=Sequence derived from alignment at CM002469.1:474731..476248+ (Nannochloropsis gaditana)
ATGGTGAATGGCACGTTTTGGGCATGTGCCTTGCCAGGCCAGAGGCATCC
TCGTATTCTCGGTGCCGCCTCCGAGTCTTTCGAGGCTGAGCGCGCGAGAA
CCCCACGCGTTCGGGCTGGTGCTGCTACAGCCTGCTGCCCCGCTTTCCAT
CCAAGATATCCGACTCTAATGTCAACAGCTACAACAAatgcagcaggagg
aagtgTAGAAGGGATGTCTGAAGTGGATGGTATCATTGAAAAACTCCTTA
CCGTCCGTGGGGCCAGGCCCGGGAAACCCGTGCAGCTCCTGGAGTCGGAG
ATCCGCATGTTGTGTAATAAATCGAAGGACGTGTTTATGGAGCAATCGAT
GCTTTTGGAGCTAGAGGCACCCATTAAGATTTGCGGCGATATTCACGGGC
AGTACTATGATTTGTTGCGGCTGTTCGAGTATGGCGGATTTCCTCCCAAT
GCCAACTACTTGTTCCTAGGtGACTATGTGGACCGTGGGAAGCAGTCTTT
GGAAACAAtctgtcttctcctcgcctacAAAATCAAGTATCCGGAGAACT
TCTTCATTCTCCGCGGAAACCACGAGTGCGCCTCTATCAACCGGATCTAC
GGCTTCTACGACGAATGCAAACGCCGATACAACATCAAGCTATGGAAGAC
ATTCACGGACTGCTTCAACTGcctccccatcgccgccgTCATCGATGAGA
AGATCTTTTGCATGCACGGGGGCCTCTCCCCGGAGCTTACCTCGTTGGAG
GAGATTAAGGATATAATGCGGCCCACGGACGTGCCAGACACGGGGCTGCT
CTGCGACTTGCTGTGGGCGGACCCCGACAAAGACATCATGGGTTGGGGAG
ACAATGACCCACGACCTTGAATGGTGAATGGCACGTTTTGGGCATGTGCC
TTGCCAGGCCAGAGGCATCCTCGTATTCTCGGTGCCGCCTCCGAGTCTTT
CGAGGCTGAGCGCGCGAGAACCCCACGCGTTCGGGCTGGTGCTGCTACAG
CCTGCTGCCCCGCTTTCCATCCAAGATATCCGACTCTAATGTCAACAGCT
ACAACAAatgcagcaggaggaagtgTAGAAGGGATGTCTGAAGTGGATGG
TATCATTGAAAAACTCCTTACCGTCCGTGGGGCCAGGCCCGGGAAACCCG
TGCAGCTCCTGGAGTCGGAGATCCGCATGTTGTGTAATAAATCGAAGGAC
GTGTTTATGGAGCAATCGATGCTTTTGGAGCTAGAGGCACCCATTAAGAT
TTGCGGCGATATTCACGGGCAGTACTATGATTTGTTGCGGCTGTTCGAGT
ATGGCGGATTTCCTCCCAATGCCAACTACTTGTTCCTAGGtGACTATGTG
GACCGTGGGAAGCAGTCTTTGGAAACAAtctgtcttctcctcgcctacAA
AATCAAGTATCCGGAGAACTTCTTCATTCTCCGCGGAAACCACGAGTGCG
CCTCTATCAACCGGATCTACGGCTTCTACGACGAATGCAAACGCCGATAC
AACATCAAGCTATGGAAGACATTCACGGACTGCTTCAACTGcctccccat
cgccgccgTCATCGATGAGAAGATCTTTTGCATGCACGGGGGCCTCTCCC
CGGAGCTTACCTCGTTGGAGGAGATTAAGGATATAATGCGGCCCACGGAC
GTGCCAGACACGGGGCTGCTCTGCGACTTGCTGTGGGCGGACCCCGACAA
AGACATCATGGGTTGGGGAGACAATGACCCACGACCTTGAATGGTGAATG
GCACGTTTTGGGCATGTGCCTTGCCAGGCCAGAGGCATCCTCGTATTCTC
GGTGCCGCCTCCGAGTCTTTCGAGGCTGAGCGCGCGAGAACCCCACGCGT
TCGGGCTGGTGCTGCTACAGCCTGCTGCCCCGCTTTCCATCCAAGATATC
CGACTCTAATGTCAACAGCTACAACAAatgcagcaggaggaagtgTAGAA
GGGATGTCTGAAGTGGATGGTATCATTGAAAAACTCCTTACCGTCCGTGG
GGCCAGGCCCGGGAAACCCGTGCAGCTCCTGGAGTCGGAGATCCGCATGT
TGTGTAATAAATCGAAGGACGTGTTTATGGAGCAATCGATGCTTTTGGAG
CTAGAGGCACCCATTAAGATTTGCGGCGATATTCACGGGCAGTACTATGA
TTTGTTGCGGCTGTTCGAGTATGGCGGATTTCCTCCCAATGCCAACTACT
TGTTCCTAGGtGACTATGTGGACCGTGGGAAGCAGTCTTTGGAAACAAtc
tgtcttctcctcgcctacAAAATCAAGTATCCGGAGAACTTCTTCATTCT
CCGCGGAAACCACGAGTGCGCCTCTATCAACCGGATCTACGGCTTCTACG
ACGAATGCAAACGCCGATACAACATCAAGCTATGGAAGACATTCACGGAC
TGCTTCAACTGcctccccatcgccgccgTCATCGATGAGAAGATCTTTTG
CATGCACGGGGGCCTCTCCCCGGAGCTTACCTCGTTGGAGGAGATTAAGG
ATATAATGCGGCCCACGGACGTGCCAGACACGGGGCTGCTCTGCGACTTG
CTGTGGGCGGACCCCGACAAAGACATCATGGGTTGGGGAGACAATGACCC
ACGACCTTGAATGGTGAATGGCACGTTTTGGGCATGTGCCTTGCCAGGCC
AGAGGCATCCTCGTATTCTCGGTGCCGCCTCCGAGTCTTTCGAGGCTGAG
CGCGCGAGAACCCCACGCGTTCGGGCTGGTGCTGCTACAGCCTGCTGCCC
CGCTTTCCATCCAAGATATCCGACTCTAATGTCAACAGCTACAACAAatg
cagcaggaggaagtgTAGAAGGGATGTCTGAAGTGGATGGTATCATTGAA
AAACTCCTTACCGTCCGTGGGGCCAGGCCCGGGAAACCCGTGCAGCTCCT
GGAGTCGGAGATCCGCATGTTGTGTAATAAATCGAAGGACGTGTTTATGG
AGCAATCGATGCTTTTGGAGCTAGAGGCACCCATTAAGATTTGCGGCGAT
ATTCACGGGCAGTACTATGATTTGTTGCGGCTGTTCGAGTATGGCGGATT
TCCTCCCAATGCCAACTACTTGTTCCTAGGtGACTATGTGGACCGTGGGA
AGCAGTCTTTGGAAACAAtctgtcttctcctcgcctacAAAATCAAGTAT
CCGGAGAACTTCTTCATTCTCCGCGGAAACCACGAGTGCGCCTCTATCAA
CCGGATCTACGGCTTCTACGACGAATGCAAACGCCGATACAACATCAAGC
TATGGAAGACATTCACGGACTGCTTCAACTGcctccccatcgccgccgTC
ATCGATGAGAAGATCTTTTGCATGCACGGGGGCCTCTCCCCGGAGCTTAC
CTCGTTGGAGGAGATTAAGGATATAATGCGGCCCACGGACGTGCCAGACA
CGGGGCTGCTCTGCGACTTGCTGTGGGCGGACCCCGACAAAGACATCATG
GGTTGGGGAGACAATGACCCACGACCTTGAATGGTGAATGGCACGTTTTG
GGCATGTGCCTTGCCAGGCCAGAGGCATCCTCGTATTCTCGGTGCCGCCT
CCGAGTCTTTCGAGGCTGAGCGCGCGAGAACCCCACGCGTTCGGGCTGGT
GCTGCTACAGCCTGCTGCCCCGCTTTCCATCCAAGATATCCGACTCTAAT
GTCAACAGCTACAACAAatgcagcaggaggaagtgTAGAAGGGATGTCTG
AAGTGGATGGTATCATTGAAAAACTCCTTACCGTCCGTGGGGCCAGGCCC
GGGAAACCCGTGCAGCTCCTGGAGTCGGAGATCCGCATGTTGTGTAATAA
ATCGAAGGACGTGTTTATGGAGCAATCGATGCTTTTGGAGCTAGAGGCAC
CCATTAAGATTTGCGGCGATATTCACGGGCAGTACTATGATTTGTTGCGG
CTGTTCGAGTATGGCGGATTTCCTCCCAATGCCAACTACTTGTTCCTAGG
tGACTATGTGGACCGTGGGAAGCAGTCTTTGGAAACAAtctgtcttctcc
tcgcctacAAAATCAAGTATCCGGAGAACTTCTTCATTCTCCGCGGAAAC
CACGAGTGCGCCTCTATCAACCGGATCTACGGCTTCTACGACGAATGCAA
ACGCCGATACAACATCAAGCTATGGAAGACATTCACGGACTGCTTCAACT
GcctccccatcgccgccgTCATCGATGAGAAGATCTTTTGCATGCACGGG
GGCCTCTCCCCGGAGCTTACCTCGTTGGAGGAGATTAAGGATATAATGCG
GCCCACGGACGTGCCAGACACGGGGCTGCTCTGCGACTTGCTGTGGGCGG
ACCCCGACAAAGACATCATGGGTTGGGGAGACAATGACCCACGACCTTGA back to top
|