EWM23915.1, cds6758 (CDS) Nannochloropsis gaditana

Overview
NameEWM23915.1
Unique Namecds6758
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:474731..474755 +
Alignment locationCM002469.1:474943..475387 +
Alignment locationCM002469.1:475570..475747 +
Alignment locationCM002469.1:475974..476184 +
Alignment locationCM002469.1:476238..476248 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23915.1
Productserine threonine-protein phosphatase pp1
Orig transcript idgnl|cribi|Naga_101004g2.5518.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:474731..474755 +
CM002469.1supercontigCM002469.1:474943..475387 +
CM002469.1supercontigCM002469.1:475570..475747 +
CM002469.1supercontigCM002469.1:475974..476184 +
CM002469.1supercontigCM002469.1:476238..476248 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR029052Metallo-depent_PP-like
IPR004843Calcineurin-like_PHP_apaH
IPR006186Ser/Thr-sp_prot-phosphatase
Homology
BLAST of EWM23915.1 vs. NCBI_GenBank
Match: gi|585105198|gb|EWM23915.1| (serine threonine-protein phosphatase pp1 [Nannochloropsis gaditana])

HSP 1 Score: 601.668 bits (1550), Expect = 0.000e+0
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0
Query:    1 MVNGTFWACALPGQRHPRILGAASESFEAERARTPRVRAGAATACCPAFHPRYPTLMSTATTNAAGGSVEGMSEVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDNDPRP 289
            MVNGTFWACALPGQRHPRILGAASESFEAERARTPRVRAGAATACCPAFHPRYPTLMSTATTNAAGGSVEGMSEVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDNDPRP
Sbjct:    1 MVNGTFWACALPGQRHPRILGAASESFEAERARTPRVRAGAATACCPAFHPRYPTLMSTATTNAAGGSVEGMSEVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDNDPRP 289          
BLAST of EWM23915.1 vs. NCBI_GenBank
Match: gi|553184953|ref|XP_005854177.1| (protein phosphatase 1, catalytic subunit, partial [Nannochloropsis gaditana CCMP526] >gi|422294888|gb|EKU22188.1| protein phosphatase 1, catalytic subunit, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 577.4 bits (1487), Expect = 0.000e+0
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0
Query:   10 ALPGQRHPRILGAASESFEAERARTPRVRAGAATACCPAFHPRYPTLMSTATTNAAGGSVEGMSEVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDND 286
            ALPGQRHPRILGAASESFEAERARTPRVRAGAATACCPAFHPRYPTLMSTATTNAAGGSVEGMSEVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDND
Sbjct:    2 ALPGQRHPRILGAASESFEAERARTPRVRAGAATACCPAFHPRYPTLMSTATTNAAGGSVEGMSEVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDND 278          
BLAST of EWM23915.1 vs. NCBI_GenBank
Match: gi|669150800|ref|XP_008610962.1| (serine/threonine-protein phosphatase PP1 [Saprolegnia diclina VS20] >gi|530737403|gb|EQC35645.1| serine/threonine-protein phosphatase PP1 [Saprolegnia diclina VS20])

HSP 1 Score: 402.519 bits (1033), Expect = 3.150e-138
Identity = 186/230 (80.87%), Postives = 211/230 (91.74%), Query Frame = 0
Query:   57 MSTATTNAAGGSVEGMSEVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDND 286
             S A T +   ++E + +VDGII+KLL+VRGARPGK V LLESEIR LC  S+++F+ Q +L+ELEAPIKICGDIHGQYYDLLRLFEYGGFPP+ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP+AA++DEKIFCMHGGLSPEL+ +E+IK  +RPTDVPDTGLLCDLLW+DP+KDI+GWG+ND
Sbjct:    7 FSFAATRSMASALEPI-DVDGIIDKLLSVRGARPGKQVNLLESEIRALCLHSREIFLSQPILVELEAPIKICGDIHGQYYDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCMHGGLSPELSQMEQIKRFVRPTDVPDTGLLCDLLWSDPEKDILGWGEND 235          
BLAST of EWM23915.1 vs. NCBI_GenBank
Match: gi|1173927022|gb|OQR81109.1| (serine/threonine-protein phosphatase PP1-gamma catalytic subunit [Achlya hypogyna])

HSP 1 Score: 398.667 bits (1023), Expect = 6.137e-137
Identity = 182/213 (85.45%), Postives = 203/213 (95.31%), Query Frame = 0
Query:   74 EVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDND 286
            +VDGII+KLL+VRGARPGK V LLESEIR LC  S+++F+ Q +L+ELEAPIKICGDIHGQYYDLLRLFEYGGFPP+ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP+AA++DEKIFCMHGGLSPEL+ +E+IK  +RPTDVPDTGLLCDLLW+DP+KDI+GWG+ND
Sbjct:    9 DVDGIIDKLLSVRGARPGKQVNLLESEIRALCLHSREIFLSQPILVELEAPIKICGDIHGQYYDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCMHGGLSPELSQMEQIKRFVRPTDVPDTGLLCDLLWSDPEKDILGWGEND 221          
BLAST of EWM23915.1 vs. NCBI_GenBank
Match: gi|294953285|ref|XP_002787687.1| (protein phosphatase type 1, putative [Perkinsus marinus ATCC 50983] >gi|239902711|gb|EER19483.1| protein phosphatase type 1, putative [Perkinsus marinus ATCC 50983])

HSP 1 Score: 397.897 bits (1021), Expect = 7.287e-137
Identity = 184/223 (82.51%), Postives = 205/223 (91.93%), Query Frame = 0
Query:   64 AAGGSVEGMSEVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDND 286
            ++G  VE + +VD IIEKLL VRG RPGK VQL + EIR LCNKS+ +F+EQ  LLELEAPIKICGD+HGQYYDLLRLFEYGGFPP ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFF+LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP+AA++DEKIFCMHGGLSPEL S+++IK I+RPTDVPDTGLLCDLLW+DP++DI GWG+ND
Sbjct:    3 SSGAPVESI-DVDAIIEKLLEVRGCRPGKGVQLTDGEIRALCNKSRQIFLEQPNLLELEAPIKICGDVHGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCMHGGLSPELNSMDQIKRILRPTDVPDTGLLCDLLWSDPEQDISGWGEND 224          
BLAST of EWM23915.1 vs. NCBI_GenBank
Match: gi|698824633|ref|XP_009845345.1| (serine/threonine-protein phosphatase [Aphanomyces astaci] >gi|574099565|gb|ETV65171.1| serine/threonine-protein phosphatase [Aphanomyces astaci])

HSP 1 Score: 398.667 bits (1023), Expect = 8.318e-137
Identity = 182/213 (85.45%), Postives = 202/213 (94.84%), Query Frame = 0
Query:   74 EVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDND 286
            +VDGIIEKLL+VRGARPGK V L ESEIR LC  S+++F+ Q +L+ELEAPIKICGDIHGQYYDLLRLFEYGGFPP+ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP+AA++DEKIFCMHGGLSPEL+ +E+IK  +RPTDVPDTGLLCDLLW+DP+KDI+GWG+ND
Sbjct:    9 DVDGIIEKLLSVRGARPGKQVNLSESEIRALCVHSREIFLSQPILVELEAPIKICGDIHGQYYDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCMHGGLSPELSQMEQIKRFVRPTDVPDTGLLCDLLWSDPEKDILGWGEND 221          
BLAST of EWM23915.1 vs. NCBI_GenBank
Match: gi|1021058538|emb|SAM05608.1| (hypothetical protein [Absidia glauca])

HSP 1 Score: 399.823 bits (1026), Expect = 9.621e-137
Identity = 183/212 (86.32%), Postives = 199/212 (93.87%), Query Frame = 0
Query:   75 VDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDND 286
            VD +IE+LL VRG+RPGK VQL E EIR LC K++D+FM Q +LLELEAPIKICGDIHGQYYDLLRLFEYGGFPP++NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAA+IDEKIFCMHGGLSP+L S+E+I+ +MRPTDVPDTGLLCDLLWADPDKDI GW +ND
Sbjct:   61 VDSVIERLLEVRGSRPGKQVQLGEHEIRFLCQKARDIFMSQPILLELEAPIKICGDIHGQYYDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAALIDEKIFCMHGGLSPDLQSMEQIRRVMRPTDVPDTGLLCDLLWADPDKDINGWSEND 272          
BLAST of EWM23915.1 vs. NCBI_GenBank
Match: gi|673051575|ref|XP_008879748.1| (serine/threonine-protein phosphatase PP1 [Aphanomyces invadans] >gi|574464583|gb|ETV91629.1| serine/threonine-protein phosphatase PP1 [Aphanomyces invadans])

HSP 1 Score: 398.667 bits (1023), Expect = 1.006e-136
Identity = 184/222 (82.88%), Postives = 207/222 (93.24%), Query Frame = 0
Query:   65 AGGSVEGMSEVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDND 286
            A  ++E + +VDGIIEKLL+VRGARPGK V L ESEIR LC  S+++F+ Q +L+ELEAPIKICGDIHGQYYDLLRLFEYGGFPP+ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP+AA++DEKIFCMHGGLSPEL+ +E+IK  +RPTDVPDTGLLCDLLW+DP+KDI+GWG+ND
Sbjct:    2 ASSALESI-DVDGIIEKLLSVRGARPGKQVNLTESEIRGLCVHSREIFLSQPILVELEAPIKICGDIHGQYYDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCMHGGLSPELSQMEQIKRFVRPTDVPDTGLLCDLLWSDPEKDILGWGEND 222          
BLAST of EWM23915.1 vs. NCBI_GenBank
Match: gi|635371888|emb|CCI39850.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 397.897 bits (1021), Expect = 1.248e-136
Identity = 184/213 (86.38%), Postives = 199/213 (93.43%), Query Frame = 0
Query:   74 EVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDND 286
            +VDG+IEKLL+VRGARPGK V L   EIR LC +S+DVF+ Q +LLELEAP+KICGDIHGQYYDLLRLFEYGGFPP ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP+AA+IDEKIFCMHGGLSPEL+ +E+IK   RPTDVPDTGLLCDLLW+DPDKDIMGWG+ND
Sbjct:    7 DVDGVIEKLLSVRGARPGKQVNLSIDEIRGLCVQSRDVFLSQPILLELEAPVKICGDIHGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEKIFCMHGGLSPELSHMEQIKRFARPTDVPDTGLLCDLLWSDPDKDIMGWGEND 219          
BLAST of EWM23915.1 vs. NCBI_GenBank
Match: gi|1183319621|gb|ORX49447.1| (serine/threonine-protein phosphatase PP1 [Hesseltinella vesiculosa])

HSP 1 Score: 396.356 bits (1017), Expect = 4.638e-136
Identity = 180/212 (84.91%), Postives = 199/212 (93.87%), Query Frame = 0
Query:   75 VDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDND 286
            VD +IE+LL VRG+RPG+ VQL E EIR LC K++D+FM Q +LL+LEAPIKICGDIHGQYYDLLRLFEYGGFPP++NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAA+IDEKIFCMHGGLSP+L S+E+I+ +MRPTDVPDTGLLCDLLW+DPDKDI GW +ND
Sbjct:    9 VDSVIERLLEVRGSRPGRQVQLAEHEIRFLCQKARDIFMAQPILLDLEAPIKICGDIHGQYYDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAALIDEKIFCMHGGLSPDLQSMEQIRRVMRPTDVPDTGLLCDLLWSDPDKDITGWSEND 220          
The following BLAST results are available for this feature:
BLAST of EWM23915.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105198|gb|EWM23915.1|0.000e+0100.00serine threonine-protein phosphatase pp1 [Nannochl... [more]
gi|553184953|ref|XP_005854177.1|0.000e+0100.00protein phosphatase 1, catalytic subunit, partial ... [more]
gi|669150800|ref|XP_008610962.1|3.150e-13880.87serine/threonine-protein phosphatase PP1 [Saproleg... [more]
gi|1173927022|gb|OQR81109.1|6.137e-13785.45serine/threonine-protein phosphatase PP1-gamma cat... [more]
gi|294953285|ref|XP_002787687.1|7.287e-13782.51protein phosphatase type 1, putative [Perkinsus ma... [more]
gi|698824633|ref|XP_009845345.1|8.318e-13785.45serine/threonine-protein phosphatase [Aphanomyces ... [more]
gi|1021058538|emb|SAM05608.1|9.621e-13786.32hypothetical protein [Absidia glauca][more]
gi|673051575|ref|XP_008879748.1|1.006e-13682.88serine/threonine-protein phosphatase PP1 [Aphanomy... [more]
gi|635371888|emb|CCI39850.1|1.248e-13686.38unnamed protein product [Albugo candida][more]
gi|1183319621|gb|ORX49447.1|4.638e-13684.91serine/threonine-protein phosphatase PP1 [Hesselti... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6774rna6774Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications