EWM23915.1, cds6758 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23915.1 vs. NCBI_GenBank
Match: gi|585105198|gb|EWM23915.1| (serine threonine-protein phosphatase pp1 [Nannochloropsis gaditana]) HSP 1 Score: 601.668 bits (1550), Expect = 0.000e+0 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0
Query: 1 MVNGTFWACALPGQRHPRILGAASESFEAERARTPRVRAGAATACCPAFHPRYPTLMSTATTNAAGGSVEGMSEVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDNDPRP 289
MVNGTFWACALPGQRHPRILGAASESFEAERARTPRVRAGAATACCPAFHPRYPTLMSTATTNAAGGSVEGMSEVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDNDPRP
Sbjct: 1 MVNGTFWACALPGQRHPRILGAASESFEAERARTPRVRAGAATACCPAFHPRYPTLMSTATTNAAGGSVEGMSEVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDNDPRP 289
BLAST of EWM23915.1 vs. NCBI_GenBank
Match: gi|553184953|ref|XP_005854177.1| (protein phosphatase 1, catalytic subunit, partial [Nannochloropsis gaditana CCMP526] >gi|422294888|gb|EKU22188.1| protein phosphatase 1, catalytic subunit, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 577.4 bits (1487), Expect = 0.000e+0 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0
Query: 10 ALPGQRHPRILGAASESFEAERARTPRVRAGAATACCPAFHPRYPTLMSTATTNAAGGSVEGMSEVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDND 286
ALPGQRHPRILGAASESFEAERARTPRVRAGAATACCPAFHPRYPTLMSTATTNAAGGSVEGMSEVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDND
Sbjct: 2 ALPGQRHPRILGAASESFEAERARTPRVRAGAATACCPAFHPRYPTLMSTATTNAAGGSVEGMSEVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDND 278
BLAST of EWM23915.1 vs. NCBI_GenBank
Match: gi|669150800|ref|XP_008610962.1| (serine/threonine-protein phosphatase PP1 [Saprolegnia diclina VS20] >gi|530737403|gb|EQC35645.1| serine/threonine-protein phosphatase PP1 [Saprolegnia diclina VS20]) HSP 1 Score: 402.519 bits (1033), Expect = 3.150e-138 Identity = 186/230 (80.87%), Postives = 211/230 (91.74%), Query Frame = 0
Query: 57 MSTATTNAAGGSVEGMSEVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDND 286
S A T + ++E + +VDGII+KLL+VRGARPGK V LLESEIR LC S+++F+ Q +L+ELEAPIKICGDIHGQYYDLLRLFEYGGFPP+ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP+AA++DEKIFCMHGGLSPEL+ +E+IK +RPTDVPDTGLLCDLLW+DP+KDI+GWG+ND
Sbjct: 7 FSFAATRSMASALEPI-DVDGIIDKLLSVRGARPGKQVNLLESEIRALCLHSREIFLSQPILVELEAPIKICGDIHGQYYDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCMHGGLSPELSQMEQIKRFVRPTDVPDTGLLCDLLWSDPEKDILGWGEND 235
BLAST of EWM23915.1 vs. NCBI_GenBank
Match: gi|1173927022|gb|OQR81109.1| (serine/threonine-protein phosphatase PP1-gamma catalytic subunit [Achlya hypogyna]) HSP 1 Score: 398.667 bits (1023), Expect = 6.137e-137 Identity = 182/213 (85.45%), Postives = 203/213 (95.31%), Query Frame = 0
Query: 74 EVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDND 286
+VDGII+KLL+VRGARPGK V LLESEIR LC S+++F+ Q +L+ELEAPIKICGDIHGQYYDLLRLFEYGGFPP+ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP+AA++DEKIFCMHGGLSPEL+ +E+IK +RPTDVPDTGLLCDLLW+DP+KDI+GWG+ND
Sbjct: 9 DVDGIIDKLLSVRGARPGKQVNLLESEIRALCLHSREIFLSQPILVELEAPIKICGDIHGQYYDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCMHGGLSPELSQMEQIKRFVRPTDVPDTGLLCDLLWSDPEKDILGWGEND 221
BLAST of EWM23915.1 vs. NCBI_GenBank
Match: gi|294953285|ref|XP_002787687.1| (protein phosphatase type 1, putative [Perkinsus marinus ATCC 50983] >gi|239902711|gb|EER19483.1| protein phosphatase type 1, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 397.897 bits (1021), Expect = 7.287e-137 Identity = 184/223 (82.51%), Postives = 205/223 (91.93%), Query Frame = 0
Query: 64 AAGGSVEGMSEVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDND 286
++G VE + +VD IIEKLL VRG RPGK VQL + EIR LCNKS+ +F+EQ LLELEAPIKICGD+HGQYYDLLRLFEYGGFPP ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFF+LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP+AA++DEKIFCMHGGLSPEL S+++IK I+RPTDVPDTGLLCDLLW+DP++DI GWG+ND
Sbjct: 3 SSGAPVESI-DVDAIIEKLLEVRGCRPGKGVQLTDGEIRALCNKSRQIFLEQPNLLELEAPIKICGDVHGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCMHGGLSPELNSMDQIKRILRPTDVPDTGLLCDLLWSDPEQDISGWGEND 224
BLAST of EWM23915.1 vs. NCBI_GenBank
Match: gi|698824633|ref|XP_009845345.1| (serine/threonine-protein phosphatase [Aphanomyces astaci] >gi|574099565|gb|ETV65171.1| serine/threonine-protein phosphatase [Aphanomyces astaci]) HSP 1 Score: 398.667 bits (1023), Expect = 8.318e-137 Identity = 182/213 (85.45%), Postives = 202/213 (94.84%), Query Frame = 0
Query: 74 EVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDND 286
+VDGIIEKLL+VRGARPGK V L ESEIR LC S+++F+ Q +L+ELEAPIKICGDIHGQYYDLLRLFEYGGFPP+ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP+AA++DEKIFCMHGGLSPEL+ +E+IK +RPTDVPDTGLLCDLLW+DP+KDI+GWG+ND
Sbjct: 9 DVDGIIEKLLSVRGARPGKQVNLSESEIRALCVHSREIFLSQPILVELEAPIKICGDIHGQYYDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCMHGGLSPELSQMEQIKRFVRPTDVPDTGLLCDLLWSDPEKDILGWGEND 221
BLAST of EWM23915.1 vs. NCBI_GenBank
Match: gi|1021058538|emb|SAM05608.1| (hypothetical protein [Absidia glauca]) HSP 1 Score: 399.823 bits (1026), Expect = 9.621e-137 Identity = 183/212 (86.32%), Postives = 199/212 (93.87%), Query Frame = 0
Query: 75 VDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDND 286
VD +IE+LL VRG+RPGK VQL E EIR LC K++D+FM Q +LLELEAPIKICGDIHGQYYDLLRLFEYGGFPP++NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAA+IDEKIFCMHGGLSP+L S+E+I+ +MRPTDVPDTGLLCDLLWADPDKDI GW +ND
Sbjct: 61 VDSVIERLLEVRGSRPGKQVQLGEHEIRFLCQKARDIFMSQPILLELEAPIKICGDIHGQYYDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAALIDEKIFCMHGGLSPDLQSMEQIRRVMRPTDVPDTGLLCDLLWADPDKDINGWSEND 272
BLAST of EWM23915.1 vs. NCBI_GenBank
Match: gi|673051575|ref|XP_008879748.1| (serine/threonine-protein phosphatase PP1 [Aphanomyces invadans] >gi|574464583|gb|ETV91629.1| serine/threonine-protein phosphatase PP1 [Aphanomyces invadans]) HSP 1 Score: 398.667 bits (1023), Expect = 1.006e-136 Identity = 184/222 (82.88%), Postives = 207/222 (93.24%), Query Frame = 0
Query: 65 AGGSVEGMSEVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDND 286
A ++E + +VDGIIEKLL+VRGARPGK V L ESEIR LC S+++F+ Q +L+ELEAPIKICGDIHGQYYDLLRLFEYGGFPP+ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP+AA++DEKIFCMHGGLSPEL+ +E+IK +RPTDVPDTGLLCDLLW+DP+KDI+GWG+ND
Sbjct: 2 ASSALESI-DVDGIIEKLLSVRGARPGKQVNLTESEIRGLCVHSREIFLSQPILVELEAPIKICGDIHGQYYDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCMHGGLSPELSQMEQIKRFVRPTDVPDTGLLCDLLWSDPEKDILGWGEND 222
BLAST of EWM23915.1 vs. NCBI_GenBank
Match: gi|635371888|emb|CCI39850.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 397.897 bits (1021), Expect = 1.248e-136 Identity = 184/213 (86.38%), Postives = 199/213 (93.43%), Query Frame = 0
Query: 74 EVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDND 286
+VDG+IEKLL+VRGARPGK V L EIR LC +S+DVF+ Q +LLELEAP+KICGDIHGQYYDLLRLFEYGGFPP ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP+AA+IDEKIFCMHGGLSPEL+ +E+IK RPTDVPDTGLLCDLLW+DPDKDIMGWG+ND
Sbjct: 7 DVDGVIEKLLSVRGARPGKQVNLSIDEIRGLCVQSRDVFLSQPILLELEAPVKICGDIHGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEKIFCMHGGLSPELSHMEQIKRFARPTDVPDTGLLCDLLWSDPDKDIMGWGEND 219
BLAST of EWM23915.1 vs. NCBI_GenBank
Match: gi|1183319621|gb|ORX49447.1| (serine/threonine-protein phosphatase PP1 [Hesseltinella vesiculosa]) HSP 1 Score: 396.356 bits (1017), Expect = 4.638e-136 Identity = 180/212 (84.91%), Postives = 199/212 (93.87%), Query Frame = 0
Query: 75 VDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTSLEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDND 286
VD +IE+LL VRG+RPG+ VQL E EIR LC K++D+FM Q +LL+LEAPIKICGDIHGQYYDLLRLFEYGGFPP++NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAA+IDEKIFCMHGGLSP+L S+E+I+ +MRPTDVPDTGLLCDLLW+DPDKDI GW +ND
Sbjct: 9 VDSVIERLLEVRGSRPGRQVQLAEHEIRFLCQKARDIFMAQPILLDLEAPIKICGDIHGQYYDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAALIDEKIFCMHGGLSPDLQSMEQIRRVMRPTDVPDTGLLCDLLWSDPDKDITGWSEND 220 The following BLAST results are available for this feature:
BLAST of EWM23915.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|