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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF1275 |
| Orig transcript id | gnl|cribi|Naga_100082g9.9350.mrna |
| Orig protein id | gnl|cribi|Naga_100082g9.9350 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:449272..451184 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6766 ID=rna6766|Name=rna6766|organism=Nannochloropsis gaditana|type=mRNA|length=582bp
ATGGGGCAGCGCGTGAAACGGTTTCGCCAGGCTCAGCGAGAGCGTCTCAG
AACCCAGGCCGCAGGGCAGAGGTCAGAGTGCAGAGGCCGAAATGCAGAGG
TCAGAGTGCAGAGGTCAGAGTGCAGAGGTCAGAGTGCAGAGGTCACAGTG
CAAAGGTCACACTGCACAGGGTCAGAGGGCAGAGGTCAGAGGGCAGAGGC
CGAAATGCAAAGGTCAGAGTGGAGAGGTCAGAGTCCTCAGGTCACAGTGG
AGACGTCAGAGGGCCCAGGCCCGGCCAGAAGGGGGTCCCGGCCCACGCGA
CGTCGGAAAGACTGGCCAAAAATAAGTGAGATTACTTGGGGGCCTTATTA
CTCGGAGTCTGTTTTCTTAGGGTATAGCGCTGCGGGGCGTGCAGAGGAAA
AAGGTTGGCGTATGGGATCACAAAATTTATGTTGGGAGAACTTACGCTGT
CGTAGTTTGGCGGGAAAGACATCCGGGGGACGCTCTGACCCATCATTGTT
AATTTGGATGGGACAAACGCTTCGTATCCAACGGGCGTCACTAGACGAAA
AAAGCGCAGGAGCGGACACTCATTCGAATTGA back to topprotein sequence of rna6766 >rna6766-protein ID=rna6766-protein|Name=rna6766|organism=Nannochloropsis gaditana|type=polypeptide|length=530bp
MSSPGCVLPGFDIALITLSPSSTALAVKDRHRRWEKEEEREQENEAPPSP
AVVQQKQTEPQNPPSNINDVPCPASKVNPPQGLQRQKSSYKNPGERPYFK
VILTASFVLTINAAFINIITLNTVQAMASAHVTGLVARASYLAATGRMDV
LYQYALTWASFVAGSCTSGVIVAQETFYLGRNYGRALFLIAAVEGIALLT
EDSYPDSIFFIWLCAYACGLQNGLTSKFSGNAVRTTHLTGASTDLGIAMG
HILKGRQGEWWKVKLHGVAVLGFFVGGILGFFTYRRFRHSALLFNIGITT
TLAVAHTLYIAYHEGISPITVLESKTDIRMHKRRIVVAGDGKRQFSFYAR
PSPSGSALEALTLRTREKHLAAARPTSGKVVASPASTARHQKRHFPKNRA
GEDADDHVALLISQETMNSSSAEGGTDENHRAHAMESAASPPVASQDDVW
VDMVAMGQLAPSSSYEEANGPAVDMESVSSHLSHRSLQQYLDEEDLVPKP
EDEGPLPEFAEDDFAAVEAEASICGEIDEF back to topmRNA from alignment at CM002469.1:449272..451184- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6766 ID=rna6766|Name=rna6766|organism=Nannochloropsis gaditana|type=mRNA|length=1913bp|location=Sequence derived from alignment at CM002469.1:449272..451184- (Nannochloropsis gaditana)
ATGTCATCACCGGGGTGCGTTTTACCAGGTTTCGACATAGCTCTCATCAC
GTTGTCTCCTTCATCAACTGCTCTTGCCGTGAAGGACCGCCACCGTCGCT
GTATTGAATGACCGGTAAAAATAAAAAATCACATCTCGCTGGTTTGATCC
CCCTTCGACACCGCCGCGTACATTTCCTGACTCTGGAAGGGGAGAAAGAG
GAGGAACGAGAGCAGGAAAATGAGGCGCCACCTTCTCCGGCTGTCGTGCA
ACAAAAACAGACGGAACCGCAAAATCCCCCCAGTAATATTAATGATGTAC
CTTGCCCTGCTTCAAAAGTTAATCCCCCTCAAGGACTCCAGCGACAAAAG
TCAAGCTACAAGAATCCAGGAGAGCGTCCGTACTTCAAGGTCATCCTCAC
GGCCTCCTTTGTGCTGACCATTAATGCAGCATTTATCAACATCATTACAC
TAAACACGGTACAAGCTATGGCAAGCGCCCACGTCACTGGCCTCGTTGCG
CGTGCATCCTATCTGGCAGCCACCGGGAGGATGGATGTCTTGTATCAGTA
AGTAAATTCTTTTTCTGCGGGATGCTATGCATTTGATCGTCTCAACATGC
CATCGTCTGATACCAAAAGCACCCCCACACACGGAATGCTTCAACTCGAT
GCTATCGTGAACTTGACAGATATGCGCTGACGTGGGCTTCATTCGTTGCG
GGAAGCTGCACGTCTGGAGTAATTGTAGCGCAAGAAACGTTTTATCTGGT
AAGTCGAGAGGAAAGCAATGTTTTGGCCAAAATAAGGTACTCAAGGCCTG
AAAGGATACAGCAGTGGTCTTTTAGTAACACGCGCCAACCAAACAAACTA
CCCACAGGGTCGAAACTACGGGCGGGCACTCTTCCTCATCGCCGCAGTCG
AGGGCATCGCCTTGCTCACAGAGGACTCCTATCCGGACTCGATTTTTTTT
ATTTGGCTTTGCGCCTATGCCTGTGGTCTTCAAAATGGGCTCACTTCCAA
GTTTTCGGGAAATGCCGTCCGCACCACCCACTTGACGGGCGCGTCCACGG
ACCTGGGCATCGCCATGGGGCACATCCTGAAAGGCAGGCAGGGGGAATGG
TGGAAAGTCAAGCTGCACGGGGTCGCAGTCTTGGGCTTTTTTGTGGGCGG
GATACTCGGATTCTTCACCTACCGCCGATTTCGACATAGCGCTCTGCTCT
TCAACATTGGGATCACGACAACCCTGGCAGTGGCCCACACACTGTACATC
GCCTACCACGAAGGCATCTCTCCCATCACCGTCCTGGAGTCCAAGACCGA
CATTCGGATGCACAAACGTCGCATCGTGGTGGCTGGCGACGGGAAGCGCC
AATTTTCTTTCTACGCTCGGCCCTCCCCGTCCGGCTCGGCACTGGAGGCG
CTGACGCTCAGGACACGCGAGAAGCACCTGGCTGCGGCGCGGCCCACCTC
GGGGAAAGTCGTCGCCTCCCCCGCCTCTACAGCACGCCATCAAAAGCGAC
ACTTCCCTAAAAATCGAGCAGGGGAGGATGCTGACGATCACGTTGCGCTT
TTGATCAGTCAAGAGACGATGAACTCCTCCTCAGCTGAGGGGGGCACTGA
TGAGAACCACCGCGCGCACGCCATGGAGTCAGCGGCCTCGCCGCCTGTAG
CCAGCCAGGACGACGTTTGGGTAGACATGGTTGCAATGGGCCAGCTGGCT
CCCAGCTCTTCGTATGAGGAAGCCAACGGGCCTGCGGTGGACATGGAGAG
TGTCTCGTCACATCTCTCGCACCGCAGCTTGCAACAATACTTGGATGAGG
AGGACCTGGTGCCTAAACCTGAAGACGAAGGGCCTTTGCCTGAATTTGCT
GAAGATGATTTCGCCGCCGTTGAGGCTGAGGCGTCAATTTGCGGGGAGAT
TGACGAGTTTTAG back to topCoding sequence (CDS) from alignment at CM002469.1:449272..451184- >rna6766 ID=rna6766|Name=rna6766|organism=Nannochloropsis gaditana|type=CDS|length=6372bp|location=Sequence derived from alignment at CM002469.1:449272..451184- (Nannochloropsis gaditana)
GGTCGAAACTACGGGCGGGCACTCTTCCTCATCGCCGCAGTCGAGGGCAT
CGCCTTGCTCACAGAGGACTCCTATCCGGACTCGATTTTTTTTATTTGGC
TTTGCGCCTATGCCTGTGGTCTTCAAAATGGGCTCACTTCCAAGTTTTCG
GGAAATGCCGTCCGCACCACCCACTTGACGGGCGCGTCCACGGACCTGGG
CATCGCCATGGGGCACATCCTGAAAGGCAGGCAGGGGGAATGGTGGAAAG
TCAAGCTGCACGGGGTCGCAGTCTTGGGCTTTTTTGTGGGCGGGATACTC
GGATTCTTCACCTACCGCCGATTTCGACATAGCGCTCTGCTCTTCAACAT
TGGGATCACGACAACCCTGGCAGTGGCCCACACACTGTACATCGCCTACC
ACGAAGGCATCTCTCCCATCACCGTCCTGGAGTCCAAGACCGACATTCGG
ATGCACAAACGTCGCATCGTGGTGGCTGGCGACGGGAAGCGCCAATTTTC
TTTCTACGCTCGGCCCTCCCCGTCCGGCTCGGCACTGGAGGCGCTGACGC
TCAGGACACGCGAGAAGCACCTGGCTGCGGCGCGGCCCACCTCGGGGAAA
GTCGTCGCCTCCCCCGCCTCTACAGCACGCCATCAAAAGCGACACTTCCC
TAAAAATCGAGCAGGGGAGGATGCTGACGATCACGTTGCGCTTTTGATCA
GTCAAGAGACGATGAACTCCTCCTCAGCTGAGGGGGGCACTGATGAGAAC
CACCGCGCGCACGCCATGGAGTCAGCGGCCTCGCCGCCTGTAGCCAGCCA
GGACGACGTTTGGGTAGACATGGTTGCAATGGGCCAGCTGGCTCCCAGCT
CTTCGTATGAGGAAGCCAACGGGCCTGCGGTGGACATGGAGAGTGTCTCG
TCACATCTCTCGCACCGCAGCTTGCAACAATACTTGGATGAGGAGGACCT
GGTGCCTAAACCTGAAGACGAAGGGCCTTTGCCTGAATTTGCTGAAGATG
ATTTCGCCGCCGTTGAGGCTGAGGCGTCAATTTGCGGGGAGATTGACGAG
TTTTAGATATGCGCTGACGTGGGCTTCATTCGTTGCGGGAAGCTGCACGT
CTGGAGTAATTGTAGCGCAAGAAACGTTTTATCTGGGGAGAAAGAGGAGG
AACGAGAGCAGGAAAATGAGGCGCCACCTTCTCCGGCTGTCGTGCAACAA
AAACAGACGGAACCGCAAAATCCCCCCAGTAATATTAATGATGTACCTTG
CCCTGCTTCAAAAGTTAATCCCCCTCAAGGACTCCAGCGACAAAAGTCAA
GCTACAAGAATCCAGGAGAGCGTCCGTACTTCAAGGTCATCCTCACGGCC
TCCTTTGTGCTGACCATTAATGCAGCATTTATCAACATCATTACACTAAA
CACGGTACAAGCTATGGCAAGCGCCCACGTCACTGGCCTCGTTGCGCGTG
CATCCTATCTGGCAGCCACCGGGAGGATGGATGTCTTGTATCAATGTCAT
CACCGGGGTGCGTTTTACCAGGTTTCGACATAGCTCTCATCACGTTGTCT
CCTTCATCAACTGCTCTTGCCGTGAAGGACCGCCACCGTCGCTGGTCGAA
ACTACGGGCGGGCACTCTTCCTCATCGCCGCAGTCGAGGGCATCGCCTTG
CTCACAGAGGACTCCTATCCGGACTCGATTTTTTTTATTTGGCTTTGCGC
CTATGCCTGTGGTCTTCAAAATGGGCTCACTTCCAAGTTTTCGGGAAATG
CCGTCCGCACCACCCACTTGACGGGCGCGTCCACGGACCTGGGCATCGCC
ATGGGGCACATCCTGAAAGGCAGGCAGGGGGAATGGTGGAAAGTCAAGCT
GCACGGGGTCGCAGTCTTGGGCTTTTTTGTGGGCGGGATACTCGGATTCT
TCACCTACCGCCGATTTCGACATAGCGCTCTGCTCTTCAACATTGGGATC
ACGACAACCCTGGCAGTGGCCCACACACTGTACATCGCCTACCACGAAGG
CATCTCTCCCATCACCGTCCTGGAGTCCAAGACCGACATTCGGATGCACA
AACGTCGCATCGTGGTGGCTGGCGACGGGAAGCGCCAATTTTCTTTCTAC
GCTCGGCCCTCCCCGTCCGGCTCGGCACTGGAGGCGCTGACGCTCAGGAC
ACGCGAGAAGCACCTGGCTGCGGCGCGGCCCACCTCGGGGAAAGTCGTCG
CCTCCCCCGCCTCTACAGCACGCCATCAAAAGCGACACTTCCCTAAAAAT
CGAGCAGGGGAGGATGCTGACGATCACGTTGCGCTTTTGATCAGTCAAGA
GACGATGAACTCCTCCTCAGCTGAGGGGGGCACTGATGAGAACCACCGCG
CGCACGCCATGGAGTCAGCGGCCTCGCCGCCTGTAGCCAGCCAGGACGAC
GTTTGGGTAGACATGGTTGCAATGGGCCAGCTGGCTCCCAGCTCTTCGTA
TGAGGAAGCCAACGGGCCTGCGGTGGACATGGAGAGTGTCTCGTCACATC
TCTCGCACCGCAGCTTGCAACAATACTTGGATGAGGAGGACCTGGTGCCT
AAACCTGAAGACGAAGGGCCTTTGCCTGAATTTGCTGAAGATGATTTCGC
CGCCGTTGAGGCTGAGGCGTCAATTTGCGGGGAGATTGACGAGTTTTAGA
TATGCGCTGACGTGGGCTTCATTCGTTGCGGGAAGCTGCACGTCTGGAGT
AATTGTAGCGCAAGAAACGTTTTATCTGGGGAGAAAGAGGAGGAACGAGA
GCAGGAAAATGAGGCGCCACCTTCTCCGGCTGTCGTGCAACAAAAACAGA
CGGAACCGCAAAATCCCCCCAGTAATATTAATGATGTACCTTGCCCTGCT
TCAAAAGTTAATCCCCCTCAAGGACTCCAGCGACAAAAGTCAAGCTACAA
GAATCCAGGAGAGCGTCCGTACTTCAAGGTCATCCTCACGGCCTCCTTTG
TGCTGACCATTAATGCAGCATTTATCAACATCATTACACTAAACACGGTA
CAAGCTATGGCAAGCGCCCACGTCACTGGCCTCGTTGCGCGTGCATCCTA
TCTGGCAGCCACCGGGAGGATGGATGTCTTGTATCAATGTCATCACCGGG
GTGCGTTTTACCAGGTTTCGACATAGCTCTCATCACGTTGTCTCCTTCAT
CAACTGCTCTTGCCGTGAAGGACCGCCACCGTCGCTGGTCGAAACTACGG
GCGGGCACTCTTCCTCATCGCCGCAGTCGAGGGCATCGCCTTGCTCACAG
AGGACTCCTATCCGGACTCGATTTTTTTTATTTGGCTTTGCGCCTATGCC
TGTGGTCTTCAAAATGGGCTCACTTCCAAGTTTTCGGGAAATGCCGTCCG
CACCACCCACTTGACGGGCGCGTCCACGGACCTGGGCATCGCCATGGGGC
ACATCCTGAAAGGCAGGCAGGGGGAATGGTGGAAAGTCAAGCTGCACGGG
GTCGCAGTCTTGGGCTTTTTTGTGGGCGGGATACTCGGATTCTTCACCTA
CCGCCGATTTCGACATAGCGCTCTGCTCTTCAACATTGGGATCACGACAA
CCCTGGCAGTGGCCCACACACTGTACATCGCCTACCACGAAGGCATCTCT
CCCATCACCGTCCTGGAGTCCAAGACCGACATTCGGATGCACAAACGTCG
CATCGTGGTGGCTGGCGACGGGAAGCGCCAATTTTCTTTCTACGCTCGGC
CCTCCCCGTCCGGCTCGGCACTGGAGGCGCTGACGCTCAGGACACGCGAG
AAGCACCTGGCTGCGGCGCGGCCCACCTCGGGGAAAGTCGTCGCCTCCCC
CGCCTCTACAGCACGCCATCAAAAGCGACACTTCCCTAAAAATCGAGCAG
GGGAGGATGCTGACGATCACGTTGCGCTTTTGATCAGTCAAGAGACGATG
AACTCCTCCTCAGCTGAGGGGGGCACTGATGAGAACCACCGCGCGCACGC
CATGGAGTCAGCGGCCTCGCCGCCTGTAGCCAGCCAGGACGACGTTTGGG
TAGACATGGTTGCAATGGGCCAGCTGGCTCCCAGCTCTTCGTATGAGGAA
GCCAACGGGCCTGCGGTGGACATGGAGAGTGTCTCGTCACATCTCTCGCA
CCGCAGCTTGCAACAATACTTGGATGAGGAGGACCTGGTGCCTAAACCTG
AAGACGAAGGGCCTTTGCCTGAATTTGCTGAAGATGATTTCGCCGCCGTT
GAGGCTGAGGCGTCAATTTGCGGGGAGATTGACGAGTTTTAGATATGCGC
TGACGTGGGCTTCATTCGTTGCGGGAAGCTGCACGTCTGGAGTAATTGTA
GCGCAAGAAACGTTTTATCTGGGGAGAAAGAGGAGGAACGAGAGCAGGAA
AATGAGGCGCCACCTTCTCCGGCTGTCGTGCAACAAAAACAGACGGAACC
GCAAAATCCCCCCAGTAATATTAATGATGTACCTTGCCCTGCTTCAAAAG
TTAATCCCCCTCAAGGACTCCAGCGACAAAAGTCAAGCTACAAGAATCCA
GGAGAGCGTCCGTACTTCAAGGTCATCCTCACGGCCTCCTTTGTGCTGAC
CATTAATGCAGCATTTATCAACATCATTACACTAAACACGGTACAAGCTA
TGGCAAGCGCCCACGTCACTGGCCTCGTTGCGCGTGCATCCTATCTGGCA
GCCACCGGGAGGATGGATGTCTTGTATCAATGTCATCACCGGGGTGCGTT
TTACCAGGTTTCGACATAGCTCTCATCACGTTGTCTCCTTCATCAACTGC
TCTTGCCGTGAAGGACCGCCACCGTCGCTGGTCGAAACTACGGGCGGGCA
CTCTTCCTCATCGCCGCAGTCGAGGGCATCGCCTTGCTCACAGAGGACTC
CTATCCGGACTCGATTTTTTTTATTTGGCTTTGCGCCTATGCCTGTGGTC
TTCAAAATGGGCTCACTTCCAAGTTTTCGGGAAATGCCGTCCGCACCACC
CACTTGACGGGCGCGTCCACGGACCTGGGCATCGCCATGGGGCACATCCT
GAAAGGCAGGCAGGGGGAATGGTGGAAAGTCAAGCTGCACGGGGTCGCAG
TCTTGGGCTTTTTTGTGGGCGGGATACTCGGATTCTTCACCTACCGCCGA
TTTCGACATAGCGCTCTGCTCTTCAACATTGGGATCACGACAACCCTGGC
AGTGGCCCACACACTGTACATCGCCTACCACGAAGGCATCTCTCCCATCA
CCGTCCTGGAGTCCAAGACCGACATTCGGATGCACAAACGTCGCATCGTG
GTGGCTGGCGACGGGAAGCGCCAATTTTCTTTCTACGCTCGGCCCTCCCC
GTCCGGCTCGGCACTGGAGGCGCTGACGCTCAGGACACGCGAGAAGCACC
TGGCTGCGGCGCGGCCCACCTCGGGGAAAGTCGTCGCCTCCCCCGCCTCT
ACAGCACGCCATCAAAAGCGACACTTCCCTAAAAATCGAGCAGGGGAGGA
TGCTGACGATCACGTTGCGCTTTTGATCAGTCAAGAGACGATGAACTCCT
CCTCAGCTGAGGGGGGCACTGATGAGAACCACCGCGCGCACGCCATGGAG
TCAGCGGCCTCGCCGCCTGTAGCCAGCCAGGACGACGTTTGGGTAGACAT
GGTTGCAATGGGCCAGCTGGCTCCCAGCTCTTCGTATGAGGAAGCCAACG
GGCCTGCGGTGGACATGGAGAGTGTCTCGTCACATCTCTCGCACCGCAGC
TTGCAACAATACTTGGATGAGGAGGACCTGGTGCCTAAACCTGAAGACGA
AGGGCCTTTGCCTGAATTTGCTGAAGATGATTTCGCCGCCGTTGAGGCTG
AGGCGTCAATTTGCGGGGAGATTGACGAGTTTTAGATATGCGCTGACGTG
GGCTTCATTCGTTGCGGGAAGCTGCACGTCTGGAGTAATTGTAGCGCAAG
AAACGTTTTATCTGGGGAGAAAGAGGAGGAACGAGAGCAGGAAAATGAGG
CGCCACCTTCTCCGGCTGTCGTGCAACAAAAACAGACGGAACCGCAAAAT
CCCCCCAGTAATATTAATGATGTACCTTGCCCTGCTTCAAAAGTTAATCC
CCCTCAAGGACTCCAGCGACAAAAGTCAAGCTACAAGAATCCAGGAGAGC
GTCCGTACTTCAAGGTCATCCTCACGGCCTCCTTTGTGCTGACCATTAAT
GCAGCATTTATCAACATCATTACACTAAACACGGTACAAGCTATGGCAAG
CGCCCACGTCACTGGCCTCGTTGCGCGTGCATCCTATCTGGCAGCCACCG
GGAGGATGGATGTCTTGTATCAATGTCATCACCGGGGTGCGTTTTACCAG
GTTTCGACATAGCTCTCATCACGTTGTCTCCTTCATCAACTGCTCTTGCC
GTGAAGGACCGCCACCGTCGCT back to top
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