|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100082g10.9367.mrna |
| Orig protein id | gnl|cribi|Naga_100082g10.9367 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:448101..448767 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6765 ID=rna6765|Name=rna6765|organism=Nannochloropsis gaditana|type=mRNA|length=2061bp
ATGCCACTCTTTTACACCCCTATAATTTTCACAGCTAGCCAAACCCACCA
GTGCCGTCGCGTACAAACAAGCATATTCAGTCATCCCGGGCAGCAACACC
ATCGTGTAATGTTTATCCGGCCGTCATCACACCCAGACGCGAGCATCATG
CCCCCTACGCAATATGTCGAAAACCGGCGCTTTACCACCAATCATATCCA
GGAGCAAAATGTCGCTGCCGTTCCACAGCACCAGCATCAGTACCGCAGGA
ACTCCGCCAGGCCACAAGAGTGCTTGGGCCGACACTCCCAGAGCGTCCCA
CGCAAGCCTGGCTACATTCCGACGTATTTGCCCGAAAGAGCAGAAAGTAA
ATTACAAAGACCACATCCAAAGACCTCTAGCCCGGCATTTCACGATCCAG
ACATGGACAACCTGCTGACGCTGCTCGAGTGTCTTCGTTTCCGCTATATG
CCTTACACCAAAGCACCGCCCGGCACAGGAATTCACATTCCTTCGAAAGA
CAAGCCCGACTCCGCAATATTTACTGCCCGACTTGTGGACCTGGCCATTT
CTCGGGGTGACCAGGGGATGTACAGCGCCTTGACGGATTTACAACGGGCC
TGCTTTTTCAAAAGAGACACGGACGCCTTGAGATCACACGGCCAGGCACG
CAGGGCACGAGAAGGTCAGGCCTTTCCAGAGGAAGATAGAAAAGATGGTT
GTAGAAGGGATCAGCGACGAACGTCTAATAAGAAGAGGTGGCGGAAGAGA
GGACATGGGGCCCTGGAGGAAGGGAAGGAGGGATTAATGGGGTTCCAATG
CGAGGCTCGCCCTCCTTCCCCTGCGCTTGACATCCCCGAGGCATCTGCCC
TGCTCCTGCGAACAGCTGCCGCAGCCAGGGACACTGAAGCAGCTGCGTGC
TTGACACTCTTGGCGGGCATTTCCGTGCCCTCGGAGCACCGCGCTGTATC
GTCGGAACGCCGAGCAGGAGGGGCTGGTCCTTATTCTAGCACTGAGGATG
ATGACAGTGCGGCATCCACCTCGGACCAGGAGGAGTTTGAAATTTTCATG
TCGGCCACGCTGCGTGCAAATGGAAACGCGGGGGTAGGCAAAGGCCGGGG
AAAGGAGTTGGAGATCCCGCGTTTCCACGATGACCCGACCTGGTATTTCG
TCCACTGCGCCGTGCCCTGGACCAGTAAAGTCGGCATTACAGTCGTCAAC
ACGGCCGTTGTTGTCAAAGGACGGCCTCGACAATCGCTGACGGTGTCCAC
AGCGGCAGAGGATGGATCGGGTTACCACGCGGGCGTGCGTGAGGGTGACT
GTGTTGTGAAAATCGAAGGCCGTGACGCGACGAGCATGCCTTGCTCAGAG
CTGATGCGCACGGTCCGTGAACTGATCGAGGATCGGAGAGAGACCGACCC
AACGCTTACGCTTGAATTTATTTTCGCTCGAAAGCTTTTAAAGAGATGCG
ATAGTAGAAGATCAAAGGTCGATAGTCCATTGCCAAGCAATTCAGCAGTT
GCTGAGCAAACCTCGTTATCGACGTCGGTTGCTTGTACGGGCACGTGTGC
TATCAACAGTGGAGGCCATGCTGATGCGCATGATGTTGTGCTCAAGACCC
TGGAAGGCGACCACAACTGCGAGATGGACACGAATGATGGTGGCAGAAAC
AAGGATGCGGAAGTCGGCTATAGTTTAGACGCCTGCAAGAGGAGCACTGA
TGTATCTAGCAAGAGCATAAATGGCTGTAGCGATACTAAAGATACGGGCA
TGGACCGAGTCAACCTCTACTGGCGGTCTCGGGAGGCGAGCGATCAGACG
TCGTCGACGGCACCTTGTCAGAGGCTTGTGATGGTGCACGCACACCGCTC
TCTGGGAACGAGCACGAGAAGAATGGTGGAAGCGAACGGGATCGAGCCTA
CACAAGTGAGGTTTCCGCTGCCGGTCTCATTGGAACACCTTCAGAGGAGC
AGACTTGCGCGCCCTGAGGCTCTCGATCTTTGTTGGTCTGCTGGTTGTCC
ACTTGTTGTCACGGACCAGCGTCTAGCCTTTGTATGGTGGGCGCTCGCAA
AGGACATGTAA back to topprotein sequence of rna6765 >rna6765-protein ID=rna6765-protein|Name=rna6765|organism=Nannochloropsis gaditana|type=polypeptide|length=193bp
MGQRVKRFRQAQRERLRTQAAGQRSECRGRNAEVRVQRSECRGQSAEVTV
QRSHCTGSEGRGQRAEAEMQRSEWRGQSPQVTVETSEGPGPARRGSRPTR
RRKDWPKISEITWGPYYSESVFLGYSAAGRAEEKGWRMGSQNLCWENLRC
RSLAGKTSGGRSDPSLLIWMGQTLRIQRASLDEKSAGADTHSN back to topmRNA from alignment at CM002469.1:448101..448767+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6765 ID=rna6765|Name=rna6765|organism=Nannochloropsis gaditana|type=mRNA|length=667bp|location=Sequence derived from alignment at CM002469.1:448101..448767+ (Nannochloropsis gaditana)
ATGGGGCAGCGCGTGAAACGGTTTCGCCAGGCTCAGCGAGAGCGTCTCAG
AACCCAGGCCGCAGGGCAGAGGTCAGAGTGCAGAGGCCGAAATGCAGAGG
TCAGAGTGCAGAGGTCAGAGTGCAGAGGTCAGAGTGCAGAGGTCACAGTG
CAAAGGTCACACTGCACAGGGTCAGAGGGCAGAGGTCAGAGGGCAGAGGC
CGAAATGCAAAGGTCAGAGTGGAGAGGTCAGAGTCCTCAGGTCACAGTGG
AGACGTCAGAGGGCCCAGGCCCGGCCAGAAGGGGGTCCCGGCCCACGCGA
CGTCGGAAAGACTGGCCAAAAATAAGTGAGATTACTTGGGGGCCTTATTA
CTCGGAGTCTGTTTTCTTAGGGTATAGCGCTGCGGGGCGTGCAGAGGAAA
AAGGTTGGCGTATGGGATCACAAAATTTATGTTGGGAGGTTAATGGAAAA
TGTGGAGAGATTTCAGAAATAATTGAGTCTTCAGACTTACTCCGGATAAA
GTCACTCACGAGAGAGCAATTAGAACTTACGCTGTCGTAGTTTGGCGGGA
AAGACATCCGGGGGACGCTCTGACCCATCATTGTTAATTTGGATGGGACA
AACGCTTCGTATCCAACGGGCGTCACTAGACGAAAAAAGCGCAGGAGCGG
ACACTCATTCGAATTGA back to topCoding sequence (CDS) from alignment at CM002469.1:448101..448767+ >rna6765 ID=rna6765|Name=rna6765|organism=Nannochloropsis gaditana|type=CDS|length=1164bp|location=Sequence derived from alignment at CM002469.1:448101..448767+ (Nannochloropsis gaditana)
ATGGGGCAGCGCGTGAAACGGTTTCGCCAGGCTCAGCGAGAGCGTCTCAG
AACCCAGGCCGCAGGGCAGAGGTCAGAGTGCAGAGGCCGAAATGCAGAGG
TCAGAGTGCAGAGGTCAGAGTGCAGAGGTCAGAGTGCAGAGGTCACAGTG
CAAAGGTCACACTGCACAGGGTCAGAGGGCAGAGGTCAGAGGGCAGAGGC
CGAAATGCAAAGGTCAGAGTGGAGAGGTCAGAGTCCTCAGGTCACAGTGG
AGACGTCAGAGGGCCCAGGCCCGGCCAGAAGGGGGTCCCGGCCCACGCGA
CGTCGGAAAGACTGGCCAAAAATAAGTGAGATTACTTGGGGGCCTTATTA
CTCGGAGTCTGTTTTCTTAGGGTATAGCGCTGCGGGGCGTGCAGAGGAAA
AAGGTTGGCGTATGGGATCACAAAATTTATGTTGGGAGAACTTACGCTGT
CGTAGTTTGGCGGGAAAGACATCCGGGGGACGCTCTGACCCATCATTGTT
AATTTGGATGGGACAAACGCTTCGTATCCAACGGGCGTCACTAGACGAAA
AAAGCGCAGGAGCGGACACTCATTCGAATTGAATGGGGCAGCGCGTGAAA
CGGTTTCGCCAGGCTCAGCGAGAGCGTCTCAGAACCCAGGCCGCAGGGCA
GAGGTCAGAGTGCAGAGGCCGAAATGCAGAGGTCAGAGTGCAGAGGTCAG
AGTGCAGAGGTCAGAGTGCAGAGGTCACAGTGCAAAGGTCACACTGCACA
GGGTCAGAGGGCAGAGGTCAGAGGGCAGAGGCCGAAATGCAAAGGTCAGA
GTGGAGAGGTCAGAGTCCTCAGGTCACAGTGGAGACGTCAGAGGGCCCAG
GCCCGGCCAGAAGGGGGTCCCGGCCCACGCGACGTCGGAAAGACTGGCCA
AAAATAAGTGAGATTACTTGGGGGCCTTATTACTCGGAGTCTGTTTTCTT
AGGGTATAGCGCTGCGGGGCGTGCAGAGGAAAAAGGTTGGCGTATGGGAT
CACAAAATTTATGTTGGGAGAACTTACGCTGTCGTAGTTTGGCGGGAAAG
ACATCCGGGGGACGCTCTGACCCATCATTGTTAATTTGGATGGGACAAAC
GCTTCGTATCCAACGGGCGTCACTAGACGAAAAAAGCGCAGGAGCGGACA
CTCATTCGAATTGA back to top
|