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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100082g20.9349.mrna |
| Orig protein id | gnl|cribi|Naga_100082g20.9349 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:427039..428953 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6754 ID=rna6754|Name=rna6754|organism=Nannochloropsis gaditana|type=mRNA|length=1179bp
TCTTTCCCCGGGGGGGGCACGGCTTCCTCCTGTCCGCCGTGACAGGCTTG
AATCATCCACGCTTGCAGCCATTGGTCCCTTTTTGCGCTCTGACAGTATA
TCTAGATTTCTGGGGTCATGCAACGTCTGAATGCATACTTTGTCCTGCGT
TTAGTTTTTTCTTTCCGTGCTGCCGACCTGGAAATACCCGCTAATGCAGG
TAGTACTTCGAATAACACTGTCCATCGCATCATGCTCGCGAGATAGAGAT
GAAGAGGGGCTTTACATGGTAGGCACTCTTCTACGTCATCAATGGGGCAT
TGGTTTAGCTGTTGGGTTAGGATTTTCGTTGTAAAAATATTGGAGGTTGC
TTGTATAGCTAGGAGACGCGAAAGATTGTGCGCCTATGACACACAAAGTC
TTGCGAACGGAATCTCAGTACAATTTTGATGATCGAAATCATTAGTATAC
TATTTCACCTCATGTCGCCGCCATTATTCCAATGCTTTTACCATAGACCT
TTGTTTCACGAGAAACAATGCTTTTGCCGAGCTTAGCGAAAAGGTTTCTG
GGCCTAGGGTGCGCAATGGAAACCGCTGCAGCAGTATCCGCTGCAACAAT
CAAGAACCGACGGCCTTATATTGCTGTTTGTGGTATGCAGCGTTTCTTTT
CAGATGGCGGTGGTGGGGGAGCTATGGGTGGTGATGGGGGAGGGAGTATC
ACTTACAGCGGAGGACAGGCAACATCGGGTCAGGGAGGGTTTTATGGAGC
GGGCGGGGCGCGGGCGAATAAGACACAGACCAAACACCGCCCTGAAGCTG
TGGCTCACGCAGCGGATATCAAATCACTTCGAATGCTGATGGAGGAAGTG
GAGGAGCTTGAGGTACAATTGCGTTCTGCAGATGAGTTGCCTAAACAGAT
TTCAATCAAGTCTGCCATAAAAAAGAAGGCATCGGGCAGGGACATGACCG
AGCTTTTGAAGCGTTTGGAACTCAAAGGCCAGCCGGTCTGGGGCCTGAGC
GTTAGCGAACGCGACCTGGTGAAAGAAGCCCGTCGCCGTTTTAACTCGTG
TTGAGCCGCTTAAACAGTCATTGTAGGAATCCGTTCGGTTGGAGCTCCAT
GTCGCCACGCAATGCATGAGTATCAAAGTGACGTTACGCGCGGGATGAAT
CGTATTTGTCGATATCAAAGGCAATTACG back to topprotein sequence of rna6754 >rna6754-protein ID=rna6754-protein|Name=rna6754|organism=Nannochloropsis gaditana|type=polypeptide|length=397bp
MAQARDVSHRPLGLLLTTAVSVCSTMILMSSRSVRASRGAFVKQGLWGMP
HSSHTGSRTPHKKGIEKLRFSVFHGNNYRGASFPWSTRSGVLASSRASPR
LVARAPAMASPSDEHAEEGKRRSMLTVQDFAAQLEPFGVTGVRFGEDGED
DELAVCCPESRRLMDCTVDMYATVNSTNYCVALPIFSPVALCYHKGARLI
PVENECELMDRLYDFLAPTLEQEDLFLIRSPVCLTLDGDLGDLGEEGEFS
EEELAGWEEFDSEDDPWEDGDEEEEEEEEDSMAGTFDDEVEKMTNPKYWD
DEQASDVREAYGEDWEKIAAFTYDGVDYTMVKILEPVLVLAKEDPDFKGI
TKWVLPSEDEAEEIAPIMEGIIKIKLGIDDQDAEDETRGGDDEEDRI back to topmRNA from alignment at CM002469.1:427039..428953- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6754 ID=rna6754|Name=rna6754|organism=Nannochloropsis gaditana|type=mRNA|length=1915bp|location=Sequence derived from alignment at CM002469.1:427039..428953- (Nannochloropsis gaditana)
CTAGGTATGGCACAAGCAAGGGATGTTTCGCATCGTCCGCTGGGGTTGCT
GCTGACCACCGCTGTGAGCGTCTGTTCCACTATGATTCTCATGTCATCGA
GAAGCGTGAGGGCAAGCAGGGGCGCATTTGTTAAACAAGGCCTCTGGGGC
ATGCCGCATTCTAGTCACACCGGTATGATACCAGCACATGCGTAGCATGG
TTAAGTCAGCGCTCTTCCTCCTCATGGCGCCTGAAACCTCTATCCACCAT
CTCCTCACTTTCCCGACCCAACGATCAAGGATCCCGCACGCCTCATAAGA
AGGGGATCGAGAAGTTGAGGTTTTCAGTCTTTCATGGGAACAATTACAGA
GGAGCTTCTTTCCCCTGGTAGGTTCTGATGCCTGTGTTTCGTACTGCTGC
CAACCCCCGCGCTGAAGCCTCGCATACATGGGCCGAGGCCTCACGGGCTC
TCAAGGGGGCCTCTTCGTGTGGTCGCTGAAGAGGCAGTCATTCAGGAGCT
GAAGTCCTCCCCCGTCCATCACATTCTTCTAGGTCGACGCGCTCCGGCGT
GTTGGCGTCTTCACGAGCGTCACCTCGACTTGTGGCACGAGCCCCGGCCA
TGGCATCACCATCCGATGAGCACGCTGAGGAAGGAAAGAGAAGGAGCATG
CTGACAGTCCAGGACTTTGCAGCCCAGCTGGAGCCATTTGGGGTCACGGG
CGTGCGTTTCGGGGAGGATGGGGAGGACGACGAGCTGGCAGTGTGCTGCC
CGGAGTCGAGGAGACTGATGGACTGCACCGTGGACATGTACGCCACCGTG
AATAGCACCAATTACTGCGTGGCCTTGCCCATCTTCAGTCCGGTGGCGCT
GTGTTACCACAAGGGGGCGCGCCTCATCCCCGTTGAGAATGAGTGCGAGC
TAATGGACAGGCTCTACGACTTCCTGGCGCCCACCCTGGAGCAGGAGGAC
CTTTTCCTCATCCGCAGCCCCGTGTGCTTGACCCTGGACGGGGACCTGGG
CGACCTGGGCGAGGAGGGGGAGTTCTCGGAGGAGGAGCTGGCGGGCTGGG
AGGAATTTGATAGCGAGGACGATCCCTGGGAGGACGGAGATGAGGAGGAA
GAGGAGGAGGAGGAGGATAGCATGGCCGGGACCTTCGATGATGAGGTCGA
AAAGATGGTGAGCAGCGATTGTTTGATGGGGAAGGGGGAAAGTCCGAGGC
ATGACAACGGAAATATGTAGGATCTCTCTCGTTTTTCCGTGATCATGGGC
AATAAGAGCTCGTATTATTGTGACATAGCGTTCAGCGTCCAAGAGTTGCC
CCTGCTCGATCCCTCGGTATCTTCTACGATGTGCAATGCCGTGCAAGATA
CATTCATCGATCAAAAAGATCAATCACGAAACCTATTTTATCCCTCAAAG
ACAAATCCCAAGTACTGGGACGACGAGCAGGCAAGCGATGTACGAGAGGC
GTACGGAGAAGACTGGGAAAAAATTGCAGCTTTTACATATGATGGCGTAG
ACTATACCATGGTCAAAATTCTCGAGCCTGTCCTTGTGCTCGCGAAGGAG
GATCCGGTCAGTCCTCCCCAAACATTGGAAATCGAATGGGAAAATCATGA
AACGATCTGAAAAATGAGAGGGAGAGAAAGTATTTAGATTCTGACATTTT
CTCCCTGATCACGTCACGTCGTTTCAAATACTCCATTCATGTACCCTTTC
CCCTAGGACTTTAAAGGCATCACCAAGTGGGTACTACCAAGCGAGGATGA
GGCCGAGGAAATAGCGCCAATCATGGAGGGTATCATCAAGATAAAGCTTG
GTATTGATGATCAAGATGCAGAAGATGAAACGCGGGGGGGGGACGATGAA
GAGGACAGAATTTGAAGGCAACAGAAAGTACAGACAGATGACGAGAGACT
GTTATAATTATTTTT back to topCoding sequence (CDS) from alignment at CM002469.1:427039..428953- >rna6754 ID=rna6754|Name=rna6754|organism=Nannochloropsis gaditana|type=CDS|length=5970bp|location=Sequence derived from alignment at CM002469.1:427039..428953- (Nannochloropsis gaditana)
GACTTTAAAGGCATCACCAAGTGGGTACTACCAAGCGAGGATGAGGCCGA
GGAAATAGCGCCAATCATGGAGGGTATCATCAAGATAAAGCTTGGTATTG
ATGATCAAGATGCAGAAGATGAAACGCGGGGGGGGGACGATGAAGAGGAC
AGAATTTGAACAAATCCCAAGTACTGGGACGACGAGCAGGCAAGCGATGT
ACGAGAGGCGTACGGAGAAGACTGGGAAAAAATTGCAGCTTTTACATATG
ATGGCGTAGACTATACCATGGTCAAAATTCTCGAGCCTGTCCTTGTGCTC
GCGAAGGAGGATCCGGTCGACGCGCTCCGGCGTGTTGGCGTCTTCACGAG
CGTCACCTCGACTTGTGGCACGAGCCCCGGCCATGGCATCACCATCCGAT
GAGCACGCTGAGGAAGGAAAGAGAAGGAGCATGCTGACAGTCCAGGACTT
TGCAGCCCAGCTGGAGCCATTTGGGGTCACGGGCGTGCGTTTCGGGGAGG
ATGGGGAGGACGACGAGCTGGCAGTGTGCTGCCCGGAGTCGAGGAGACTG
ATGGACTGCACCGTGGACATGTACGCCACCGTGAATAGCACCAATTACTG
CGTGGCCTTGCCCATCTTCAGTCCGGTGGCGCTGTGTTACCACAAGGGGG
CGCGCCTCATCCCCGTTGAGAATGAGTGCGAGCTAATGGACAGGCTCTAC
GACTTCCTGGCGCCCACCCTGGAGCAGGAGGACCTTTTCCTCATCCGCAG
CCCCGTGTGCTTGACCCTGGACGGGGACCTGGGCGACCTGGGCGAGGAGG
GGGAGTTCTCGGAGGAGGAGCTGGCGGGCTGGGAGGAATTTGATAGCGAG
GACGATCCCTGGGAGGACGGAGATGAGGAGGAAGAGGAGGAGGAGGAGGA
TAGCATGGCCGGGACCTTCGATGATGAGGTCGAAAAGATGGATCCCGCAC
GCCTCATAAGAAGGGGATCGAGAAGTTGAGGTTTTCAGTCTTTCATGGGA
ACAATTACAGAGGAGCTTCTTTCCCCTGATGGCACAAGCAAGGGATGTTT
CGCATCGTCCGCTGGGGTTGCTGCTGACCACCGCTGTGAGCGTCTGTTCC
ACTATGATTCTCATGTCATCGAGAAGCGTGAGGGCAAGCAGGGGCGCATT
TGTTAAACAAGGCCTCTGGGGCATGCCGCATTCTAGTCACACCGGACTTT
AAAGGCATCACCAAGTGGGTACTACCAAGCGAGGATGAGGCCGAGGAAAT
AGCGCCAATCATGGAGGGTATCATCAAGATAAAGCTTGGTATTGATGATC
AAGATGCAGAAGATGAAACGCGGGGGGGGGACGATGAAGAGGACAGAATT
TGAACAAATCCCAAGTACTGGGACGACGAGCAGGCAAGCGATGTACGAGA
GGCGTACGGAGAAGACTGGGAAAAAATTGCAGCTTTTACATATGATGGCG
TAGACTATACCATGGTCAAAATTCTCGAGCCTGTCCTTGTGCTCGCGAAG
GAGGATCCGGTCGACGCGCTCCGGCGTGTTGGCGTCTTCACGAGCGTCAC
CTCGACTTGTGGCACGAGCCCCGGCCATGGCATCACCATCCGATGAGCAC
GCTGAGGAAGGAAAGAGAAGGAGCATGCTGACAGTCCAGGACTTTGCAGC
CCAGCTGGAGCCATTTGGGGTCACGGGCGTGCGTTTCGGGGAGGATGGGG
AGGACGACGAGCTGGCAGTGTGCTGCCCGGAGTCGAGGAGACTGATGGAC
TGCACCGTGGACATGTACGCCACCGTGAATAGCACCAATTACTGCGTGGC
CTTGCCCATCTTCAGTCCGGTGGCGCTGTGTTACCACAAGGGGGCGCGCC
TCATCCCCGTTGAGAATGAGTGCGAGCTAATGGACAGGCTCTACGACTTC
CTGGCGCCCACCCTGGAGCAGGAGGACCTTTTCCTCATCCGCAGCCCCGT
GTGCTTGACCCTGGACGGGGACCTGGGCGACCTGGGCGAGGAGGGGGAGT
TCTCGGAGGAGGAGCTGGCGGGCTGGGAGGAATTTGATAGCGAGGACGAT
CCCTGGGAGGACGGAGATGAGGAGGAAGAGGAGGAGGAGGAGGATAGCAT
GGCCGGGACCTTCGATGATGAGGTCGAAAAGATGGATCCCGCACGCCTCA
TAAGAAGGGGATCGAGAAGTTGAGGTTTTCAGTCTTTCATGGGAACAATT
ACAGAGGAGCTTCTTTCCCCTGATGGCACAAGCAAGGGATGTTTCGCATC
GTCCGCTGGGGTTGCTGCTGACCACCGCTGTGAGCGTCTGTTCCACTATG
ATTCTCATGTCATCGAGAAGCGTGAGGGCAAGCAGGGGCGCATTTGTTAA
ACAAGGCCTCTGGGGCATGCCGCATTCTAGTCACACCGGACTTTAAAGGC
ATCACCAAGTGGGTACTACCAAGCGAGGATGAGGCCGAGGAAATAGCGCC
AATCATGGAGGGTATCATCAAGATAAAGCTTGGTATTGATGATCAAGATG
CAGAAGATGAAACGCGGGGGGGGGACGATGAAGAGGACAGAATTTGAACA
AATCCCAAGTACTGGGACGACGAGCAGGCAAGCGATGTACGAGAGGCGTA
CGGAGAAGACTGGGAAAAAATTGCAGCTTTTACATATGATGGCGTAGACT
ATACCATGGTCAAAATTCTCGAGCCTGTCCTTGTGCTCGCGAAGGAGGAT
CCGGTCGACGCGCTCCGGCGTGTTGGCGTCTTCACGAGCGTCACCTCGAC
TTGTGGCACGAGCCCCGGCCATGGCATCACCATCCGATGAGCACGCTGAG
GAAGGAAAGAGAAGGAGCATGCTGACAGTCCAGGACTTTGCAGCCCAGCT
GGAGCCATTTGGGGTCACGGGCGTGCGTTTCGGGGAGGATGGGGAGGACG
ACGAGCTGGCAGTGTGCTGCCCGGAGTCGAGGAGACTGATGGACTGCACC
GTGGACATGTACGCCACCGTGAATAGCACCAATTACTGCGTGGCCTTGCC
CATCTTCAGTCCGGTGGCGCTGTGTTACCACAAGGGGGCGCGCCTCATCC
CCGTTGAGAATGAGTGCGAGCTAATGGACAGGCTCTACGACTTCCTGGCG
CCCACCCTGGAGCAGGAGGACCTTTTCCTCATCCGCAGCCCCGTGTGCTT
GACCCTGGACGGGGACCTGGGCGACCTGGGCGAGGAGGGGGAGTTCTCGG
AGGAGGAGCTGGCGGGCTGGGAGGAATTTGATAGCGAGGACGATCCCTGG
GAGGACGGAGATGAGGAGGAAGAGGAGGAGGAGGAGGATAGCATGGCCGG
GACCTTCGATGATGAGGTCGAAAAGATGGATCCCGCACGCCTCATAAGAA
GGGGATCGAGAAGTTGAGGTTTTCAGTCTTTCATGGGAACAATTACAGAG
GAGCTTCTTTCCCCTGATGGCACAAGCAAGGGATGTTTCGCATCGTCCGC
TGGGGTTGCTGCTGACCACCGCTGTGAGCGTCTGTTCCACTATGATTCTC
ATGTCATCGAGAAGCGTGAGGGCAAGCAGGGGCGCATTTGTTAAACAAGG
CCTCTGGGGCATGCCGCATTCTAGTCACACCGGACTTTAAAGGCATCACC
AAGTGGGTACTACCAAGCGAGGATGAGGCCGAGGAAATAGCGCCAATCAT
GGAGGGTATCATCAAGATAAAGCTTGGTATTGATGATCAAGATGCAGAAG
ATGAAACGCGGGGGGGGGACGATGAAGAGGACAGAATTTGAACAAATCCC
AAGTACTGGGACGACGAGCAGGCAAGCGATGTACGAGAGGCGTACGGAGA
AGACTGGGAAAAAATTGCAGCTTTTACATATGATGGCGTAGACTATACCA
TGGTCAAAATTCTCGAGCCTGTCCTTGTGCTCGCGAAGGAGGATCCGGTC
GACGCGCTCCGGCGTGTTGGCGTCTTCACGAGCGTCACCTCGACTTGTGG
CACGAGCCCCGGCCATGGCATCACCATCCGATGAGCACGCTGAGGAAGGA
AAGAGAAGGAGCATGCTGACAGTCCAGGACTTTGCAGCCCAGCTGGAGCC
ATTTGGGGTCACGGGCGTGCGTTTCGGGGAGGATGGGGAGGACGACGAGC
TGGCAGTGTGCTGCCCGGAGTCGAGGAGACTGATGGACTGCACCGTGGAC
ATGTACGCCACCGTGAATAGCACCAATTACTGCGTGGCCTTGCCCATCTT
CAGTCCGGTGGCGCTGTGTTACCACAAGGGGGCGCGCCTCATCCCCGTTG
AGAATGAGTGCGAGCTAATGGACAGGCTCTACGACTTCCTGGCGCCCACC
CTGGAGCAGGAGGACCTTTTCCTCATCCGCAGCCCCGTGTGCTTGACCCT
GGACGGGGACCTGGGCGACCTGGGCGAGGAGGGGGAGTTCTCGGAGGAGG
AGCTGGCGGGCTGGGAGGAATTTGATAGCGAGGACGATCCCTGGGAGGAC
GGAGATGAGGAGGAAGAGGAGGAGGAGGAGGATAGCATGGCCGGGACCTT
CGATGATGAGGTCGAAAAGATGGATCCCGCACGCCTCATAAGAAGGGGAT
CGAGAAGTTGAGGTTTTCAGTCTTTCATGGGAACAATTACAGAGGAGCTT
CTTTCCCCTGATGGCACAAGCAAGGGATGTTTCGCATCGTCCGCTGGGGT
TGCTGCTGACCACCGCTGTGAGCGTCTGTTCCACTATGATTCTCATGTCA
TCGAGAAGCGTGAGGGCAAGCAGGGGCGCATTTGTTAAACAAGGCCTCTG
GGGCATGCCGCATTCTAGTCACACCGGACTTTAAAGGCATCACCAAGTGG
GTACTACCAAGCGAGGATGAGGCCGAGGAAATAGCGCCAATCATGGAGGG
TATCATCAAGATAAAGCTTGGTATTGATGATCAAGATGCAGAAGATGAAA
CGCGGGGGGGGGACGATGAAGAGGACAGAATTTGAACAAATCCCAAGTAC
TGGGACGACGAGCAGGCAAGCGATGTACGAGAGGCGTACGGAGAAGACTG
GGAAAAAATTGCAGCTTTTACATATGATGGCGTAGACTATACCATGGTCA
AAATTCTCGAGCCTGTCCTTGTGCTCGCGAAGGAGGATCCGGTCGACGCG
CTCCGGCGTGTTGGCGTCTTCACGAGCGTCACCTCGACTTGTGGCACGAG
CCCCGGCCATGGCATCACCATCCGATGAGCACGCTGAGGAAGGAAAGAGA
AGGAGCATGCTGACAGTCCAGGACTTTGCAGCCCAGCTGGAGCCATTTGG
GGTCACGGGCGTGCGTTTCGGGGAGGATGGGGAGGACGACGAGCTGGCAG
TGTGCTGCCCGGAGTCGAGGAGACTGATGGACTGCACCGTGGACATGTAC
GCCACCGTGAATAGCACCAATTACTGCGTGGCCTTGCCCATCTTCAGTCC
GGTGGCGCTGTGTTACCACAAGGGGGCGCGCCTCATCCCCGTTGAGAATG
AGTGCGAGCTAATGGACAGGCTCTACGACTTCCTGGCGCCCACCCTGGAG
CAGGAGGACCTTTTCCTCATCCGCAGCCCCGTGTGCTTGACCCTGGACGG
GGACCTGGGCGACCTGGGCGAGGAGGGGGAGTTCTCGGAGGAGGAGCTGG
CGGGCTGGGAGGAATTTGATAGCGAGGACGATCCCTGGGAGGACGGAGAT
GAGGAGGAAGAGGAGGAGGAGGAGGATAGCATGGCCGGGACCTTCGATGA
TGAGGTCGAAAAGATGGATCCCGCACGCCTCATAAGAAGGGGATCGAGAA
GTTGAGGTTTTCAGTCTTTCATGGGAACAATTACAGAGGAGCTTCTTTCC
CCTGATGGCACAAGCAAGGGATGTTTCGCATCGTCCGCTGGGGTTGCTGC
TGACCACCGCTGTGAGCGTCTGTTCCACTATGATTCTCATGTCATCGAGA
AGCGTGAGGGCAAGCAGGGGCGCATTTGTTAAACAAGGCCTCTGGGGCAT
GCCGCATTCTAGTCACACCG back to top
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