EWM23917.1, cds6738 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23917.1 vs. NCBI_GenBank
Match: gi|585105202|gb|EWM23917.1| (hypothetical protein Naga_100082g20 [Nannochloropsis gaditana]) HSP 1 Score: 812.757 bits (2098), Expect = 0.000e+0 Identity = 397/397 (100.00%), Postives = 397/397 (100.00%), Query Frame = 0
Query: 1 MAQARDVSHRPLGLLLTTAVSVCSTMILMSSRSVRASRGAFVKQGLWGMPHSSHTGSRTPHKKGIEKLRFSVFHGNNYRGASFPWSTRSGVLASSRASPRLVARAPAMASPSDEHAEEGKRRSMLTVQDFAAQLEPFGVTGVRFGEDGEDDELAVCCPESRRLMDCTVDMYATVNSTNYCVALPIFSPVALCYHKGARLIPVENECELMDRLYDFLAPTLEQEDLFLIRSPVCLTLDGDLGDLGEEGEFSEEELAGWEEFDSEDDPWEDGDEEEEEEEEDSMAGTFDDEVEKMTNPKYWDDEQASDVREAYGEDWEKIAAFTYDGVDYTMVKILEPVLVLAKEDPDFKGITKWVLPSEDEAEEIAPIMEGIIKIKLGIDDQDAEDETRGGDDEEDRI 397
MAQARDVSHRPLGLLLTTAVSVCSTMILMSSRSVRASRGAFVKQGLWGMPHSSHTGSRTPHKKGIEKLRFSVFHGNNYRGASFPWSTRSGVLASSRASPRLVARAPAMASPSDEHAEEGKRRSMLTVQDFAAQLEPFGVTGVRFGEDGEDDELAVCCPESRRLMDCTVDMYATVNSTNYCVALPIFSPVALCYHKGARLIPVENECELMDRLYDFLAPTLEQEDLFLIRSPVCLTLDGDLGDLGEEGEFSEEELAGWEEFDSEDDPWEDGDEEEEEEEEDSMAGTFDDEVEKMTNPKYWDDEQASDVREAYGEDWEKIAAFTYDGVDYTMVKILEPVLVLAKEDPDFKGITKWVLPSEDEAEEIAPIMEGIIKIKLGIDDQDAEDETRGGDDEEDRI
Sbjct: 1 MAQARDVSHRPLGLLLTTAVSVCSTMILMSSRSVRASRGAFVKQGLWGMPHSSHTGSRTPHKKGIEKLRFSVFHGNNYRGASFPWSTRSGVLASSRASPRLVARAPAMASPSDEHAEEGKRRSMLTVQDFAAQLEPFGVTGVRFGEDGEDDELAVCCPESRRLMDCTVDMYATVNSTNYCVALPIFSPVALCYHKGARLIPVENECELMDRLYDFLAPTLEQEDLFLIRSPVCLTLDGDLGDLGEEGEFSEEELAGWEEFDSEDDPWEDGDEEEEEEEEDSMAGTFDDEVEKMTNPKYWDDEQASDVREAYGEDWEKIAAFTYDGVDYTMVKILEPVLVLAKEDPDFKGITKWVLPSEDEAEEIAPIMEGIIKIKLGIDDQDAEDETRGGDDEEDRI 397
BLAST of EWM23917.1 vs. NCBI_GenBank
Match: gi|497242781|ref|WP_009557003.1| (DUF3727 domain-containing protein [Oscillatoriales cyanobacterium JSC-12] >gi|410710729|gb|EKQ68236.1| Protein of unknown function (DUF3727) [Oscillatoriales cyanobacterium JSC-12]) HSP 1 Score: 65.0846 bits (157), Expect = 1.006e-8 Identity = 39/114 (34.21%), Postives = 65/114 (57.02%), Query Frame = 0
Query: 142 VRFGEDGEDDELAVCCPESRRLMDCTVDMYATVNSTNYCVALPIFSPVALCYHKGA----RLIPVENECELMDRLYDFLAPTLEQEDLFLIRSPVCLTLDGDLGDLGEEGEFSE 251
+R D +DE V E+ R + C+V+ Y + + +Y + LPI +PV + +G +PV+ E +D L++ LE+++L L R+ V LT+DGDL +L +E EF+E
Sbjct: 5 IRISGDPTEDETVVLTDEAGRTIACSVERYLEIENQDYVLLLPIDTPVEIFVWQGEDENEEAVPVDEED--IDALFNTAKAVLEEQNLTLKRTAVVLTVDGDLPELDDEDEFAE 116 The following BLAST results are available for this feature:
BLAST of EWM23917.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|