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Properties
| Property Name | Value |
|---|
| Product | methyltransferase-like protein 21a-like isoform 2 |
| Orig transcript id | gnl|cribi|Naga_100082g23.9366.mrna |
| Orig protein id | gnl|cribi|Naga_100082g23.9366 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:420791..422315 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6751 ID=rna6751|Name=rna6751|organism=Nannochloropsis gaditana|type=mRNA|length=7343bp
ACTCTTTCTGGCCCACTCCCGCTCCGGCATCTCCTGGAAGTAATGATGCG
TTCTAACACAATTAACGCTGATTTTCATCACCGTTGACATTCCACTCGAA
CAGACGATAGCGTACGTGGGCCATTTAAGCTCTCTCATAGGAGTATCTTC
CCCCTTCGCGTTGGACCTTGCCATTTGCCTACGTGTCCCCTAAACATGCC
AACAGGAAGCTGCTTTCCGAGGGGTAAAGACCCTCCTGTCACGTCTAATA
GCAATCGTCGCAGAAGCCAATTGACAGGCCCTGTCGTCGAGGCGACCCTA
CTCGTCAAGGGCCCTCCCGCGAAGCATAAGCGTGAGGCTTGGGCTGCAGT
TAGGAATGCTGGCGTCACCGCTGCCTCCTCGAGCCCCTCTTCCCAACCTG
CTGGGACGGATACTCCACGTGAAGGCCCTGATTTTTTATTTGGCAATTCC
TCTCCAAAGAAAAAACCAGCGAGCCTCAATAACGGATTGAACACTCAGCA
TTCAAAGGAAGCTACTGAGGGCTTCCACAACGAAGCTAGTAAACTCACCC
AAGCTGTGGGTCTAGGATGCGTGACCAAAATCGGACGAGCCGTTCCACAA
ATTTCTCCCATCTGTCTGAAACAAATGGTGCGTGGAACCGCTGTCCTGGG
AGTCGTCATTCGAGTGGGGCCTAAAGACGTGAGCGTAGCCTTGCCTGGTG
GACTTTCCGGGCGGGTGCCCCTCGTAGAGGTTTCAGACCCGTTCTTCTCT
CGCTTCTCACCTTCAGTGAACGGAACAATCTCTGATCCTGTGTCGGAAAA
GGAGGATCTCATAAAGGCAGTTTCGACGTTTTTACGTCCCGGCCAGGTGG
TGCGTGCGGTCGTCTCAAGTTCAAACGCGGCGTCCAGAAAGCAAAGTGCG
GGGGGGGCAGGGAGCGGTGGCAGAGCAAGTCAAAAGGTTCCGTTGACTCT
TCGCGCATCAGCGGTAAATCGAGGGTTGAAACTGGAGCACGTGCTCCCAG
GCGGGGCCCTAATGGGCGCCGTGGCCAGTGTAGAAGACCATGGCTACGTG
GTGAGCACAGGGTTGGAGGGTGTGACTGCCTTTTTGGCGAGAAAGCATGT
CAAAGGTGGTGCGGAGGTGGAGAAAGCATTGGTGAAGGGGAGCCCCGTAG
AAATTGTCGTCCTAGATGTCAAAGAGGCGTCGCGAGCCATCACTTGCGGT
TTCGATCCAGCCGTTCTCCCCAGGGCCCTCACGAGGGGCTCCGCCCTCAC
CCTTGCGGGGTTGAAACCGGGAATGCTTGTGAACGCGGCTATCGATGCGA
TCCTAAAAAATGGGCTGGCACTCACGTTTCTTGGCGGATTGTCCGGAGTA
GTGTCTCTGGAGCATTTGGACCGTCCTTACGCGGAGAACGACTGGCGCAA
GCGTTACCGTCTGGGTGACATCCTGCAGGTGCGCGTCCTCATGGTAGACG
TGAAGAGCAAGTCAGTCTACTTGACATTACGCGCCCACCTACTCGGCATG
CGGGCCCCCTCGGGTCTTCCTGAACTTGGTCAGGTGCTGTCGGAGGCCAA
GGTATTGCGTGTCGACCCGACAAAGGGGCTAGTCCTGGGCTTCCTGCCTC
CCGAGTCGGTAAATGGTGGTACAAAGGACATCGATACATGCGAAGACGAG
GGACGCATCGAAGAGGAGCTATCCGGCCGGCGGGCCAAGAGGGTGCGTGC
GAAGGAAGATGGTGAGGATGACGGCAGCAATTCCAAATTGAAAGACGAGC
CCAGCGAGCTTCTACGAGAGAAAATTTTGCAGAGGCCGCGATACGTACCT
GTATTCGTGCACGCGTCACAGATAGAGTCCCTGGCGAGCGTCAGTGTCGG
GCAAACCGTGGCTTGCCGAGTCATCGGCTCGGCACCAGTAGAGGGGGCTG
TGCATGGCTCCATGAGAGTGGCGACGATGGATGCGCCGTTCGTGCGCTTG
GCGGACGTGCAGCCTGGGCAGCTTGTGAGGGCGAGGGTGGCCGCCGTAGC
GGGCTGGGGATTGACCCTGGATTTGGGCCAGGGGATTCGCGCTCATTGTA
CAAATATGCACTTGACAGACGGGGCAGGATCCAAGTCAAATATTATCCGA
GCAAAGGCGCTGACAGAGGCCAAGAAGGGCAAGACCGGTAAGAGCGTGTA
TCAAGCAGGCCAAGAGGTTACGTGCCGCATCCTTCAGGTAGATACTCTTA
CCCGAAAGGTCTACGCTACCATGAAGCCATCTTTGCTAAAAGACACCCCT
GGAGGGATTCTAAATGCTTATACCGAGGCGATACCGGGCAAGAAGTGTCT
GGGCTTTGTAACAAAAGTGGAGGATTTTGGTGTGATAGTAACATTTTTCG
ATAATGTGCATGGGTTGCTTCCTTTGAAACACTTGGCAGCACAAGGTGTT
TCAAATCCGACTCATGATTTTCGGTTGGGGCAGGTGCTCCGCTGCGTCGT
GACATCTTGTGCGCCCCAACGACGGCCACCGCGGCTGAGTCTGCGGCTCG
ACGTCCACGAGGAAGCGGGCATGGCTAAAAGTCCAGAGAGCGCACGTCAG
CCTGGAGCGGTGAGCGCAGGCGACAGTGTGAGCGGTACGGTAGTTCGTGT
CCAAGAACCCTTCGTCGTGGTAAAGCTGGATGGCCATGGGAGCACAGAGC
CCCTGGCGTTTCTTCACAAACATCAATTGGGAGACCACGCAGCCCTTGCA
GATCAATTTTTAGCCCGAACAAAGATGGGTGATCGCATTGAGAGTGCTTT
AGTTCTTGAATTTCGTCGGGATTCTAACGAGCCATTGCTTTCTTTGAAGC
CGCTCTTGGTGCGGGCTGGTGGTGGTATCGTAGATCAAGCGCCGGATTCG
AAACTTGCGGCGAAGAAGGGACCATGTTTTGCCAAGCCTCCTAGATTGCA
AGACCTGAAAATCGGAAGAGCACGACTTTGCGGGTATATATCTCGGGTGG
AGAGCTTCGGGCTCTTTGTTCGCTTCGTAGGCGGGCAAACAGCGATGGCT
CCTCGCGCACTTATCGCGGACAGGTTTGTGGATGATGCCTCAGGACTTTT
TCGCGAGGGTGATTCGGTGCGATGTCTCCTCCATCGGGTCGACGCCGATA
AGGATAGAGTTTTTGTGACAACTCAACGTTCGCAGTTACCTGTGACAGAT
TCTTTTTTTCTAGAAACTCTTCTGCTCGAGTCGGTGTCCACAATTGGCAT
CGACACGGAAGAATCGGAAGTTTTCGATTGGCAGCGCTTCGCTTTAGGGG
CTACCGTTAATGCAACTGTGACGGCTGTGAAAGATTATGGAATCGTGCTC
TCCGGTGAAGACCATCGGACGGTCATGCTGGCTCCAGGGCCTGATCATGT
TCTCGCATGCGCTCCAAATGACGAAGTGAAAGTACGCGTGCTTGATGTAG
ATTGGGCCAAGCGCGTCTTGGTTGTAACAATGCTGCCCGAATTAGTTAGG
CGAGGTCGTGCTAAATATCGAAAGACGGCAGACGGCCTTTCCTTGCAAAC
GGGCGCCCGTGGTGTTGCAGAGATTGTCCTTAAGAGGGATCGTTACGCGG
TGGTGGAAATGGATGGCGCACTGGCTTATCTCGCGGTTGCAGATTATCAA
TGTCCATATCTTGCCACAGGAAATTTAGAATTGGGCGTCAATGTTGATGT
TGTTGTACGCCGCCCATGGAGAACCGGTCTAGGGAAAAAATGCAGGCTAT
CTTATCCTCAAGAGCCCATTATGCTCGTTACATTGGCGCAGGAGCAAGAC
GCGGCAGAAAAGAATCAAAGCGGAAGGGTCGGACCCAGCAAGAAATTTGA
ACGGGAAAGAAAGAGAGCGCAGCAAGAGATGGCGGTTGATGAGAAGACAC
CGACTGCTGCCGAACATCGTGGGAGTACAAAAGAAGGCAAGAGGCCTAAA
CTGGACCGTGCAGAGAAAAAGACCCCCCCCTTGCACCTGGAAAGGAAGCA
AGCTCGGCCAATCACGACATCACAGATTCTTGTTGGAGCAGCCTTACCTG
CTTTGGTGGCAGATGTTCGACCGGATGAGCTAATCTTAACGTTAAATATT
CAGGATATGATAGATGAGCCACAACCTCGGGGTGTGCTGGATCCGAGCAT
GGAGAGGAAGAGCAATCGTTTGTCGGCAATGCGTGTACTTGCCAAAGTAT
TTATCACCCACAGTGGTCGGCAATGTCTCATGGACGTGGAGGAAGCGGTA
GGCGAGGCTTTACAAGCGAAGCTGTCAGAAGAAAGAGGAGAAGTTCGGCA
TCTTTCCTTCCATCCCCTATCGCAATATCAAGTAGGCCAAGAGCTCGAAG
TGCGAGTTTTGGATATACGCGAGAAGGAGCTGAAGAAGATGAAGCTGCTC
GAATGTTCGCTACGTCCACAAGACGTCCAGGCTTCGAAGGAGGACCTGAT
TGTACGGCAGCCAACGTGGGACACATTGGCGGTAGGGACAATACTCCTTG
GTGTCATCACAGAAATTCAATTAGAAGGGCTATGGGTGGCAGTGTCACGG
GCTGTGAAGGGATTTGTTCATTATTTGGACATTTCACGAGACGGTGACGC
AGGCGTCTTCTCGCGCATGAGAGAGGCAGGCGCTGTTGGTATACCAGTGC
CCGTCATTGTCTTACAGGTGGACGCGGTGCGGCATCGCCTACAGTTGTCG
ATTCGTGGTGTGCATTTAAAGGGTGATGTGGATCCTACCATGTTTCCAAT
CTTGCCTTCTTCCTCATCACGCTCTGAAAGTGGGATGAATATGACTCCGA
GATCTTCAAGAATAGGTTGTCTGGAGCCAAACGTTGGAGACATCCTGACA
GGACGCGTTTGCCTGGGTCCCCGCGCTCCCCTTCTCAACCCGCCTTCGGT
GGCCATTCAGTTGGGCTATCAAGTATTTGGGCGACTGTGTATCACGGAGC
TGGATGAGCCTGCTCAGTGGATAGATCAGGCATTGGCACGTGCGAATTCT
CCCTTGCAAGACGGTAAAGACGTCAGATGCCGTGTCCTGTCGGTCGCTGG
TGAGCGCATCGATGTCTCTTTGCGTCCCTCTCGACTTCACCCGAGCTTGG
CTATCACTGCAGCCACAGCTGAAGACCCGTTGCCGGAGGAGGGATCGGTG
ACCAAGGGGTACGTGGTGGGTACTTCGACAAAAGGGTGTTTTGTTCGTCT
TTCCAAGAATGTGACGGCCCGTGTTCTTATCAAAGACCTAGCGGACGGTT
TCATCACAAGCCCGATGGAGGCCTTTCCTGTCGGGAAACTTGTTGCAGGA
CGCGTTCTGCGTATCGAGCAGAGAAGTGGGGCTGGAGCTGAAGGCCTGAA
GATTGATCTCTCGCTGCGACCCTCTGTGGTGGTTGGAGAAAGCATGCATC
AAATGGCTTTCGAAGATGTGCTTGAGAATACAAAAGTCAAAGGCGTTGTG
GTTAGGGTCGAGCCGTTTGGAGTCTTTATAAAGATTCAGAATAGCGAGCT
TACAGGGATGTGCCACATTTCCGAAGTGAGCGATCAGCTTGTAAAAAATT
TAAGTGAGATGTACGAACCTGGAGATATAGTCAAGGCCCTTGTGCTGAAG
GTTGACGCAACGACGAAGCGGATTAGTTTGAGCTTGAAGCCGTCCCATTT
CAAGGAGGATAAGTACGATGACGACGACAATGAAGGTGGGGCTGGCGGCA
GTGGAGAGGAGAAGAGTGATCAGGGCGGAAAGGACTTTGTGGAGGATGGC
GCAGGTGAGAGTGACGAGGGAGTGGAGGAAGTAGATCTATCGGGTCGGAG
CACTTGTGGGGCAAAAATTGGCAAGGAAGAATGCGGGGACGTGGTTTTAG
GGGTTTCGATGCAACATGGCCGTGAAGAGATGGGGGGAGACATGGAAGTT
GAGCCAGAGGAAGACTCCGGTGGGCGCTTGGAACAGAGAATGACTGATCC
ACGCTCTTCTGGGGCTGTTCCGGAGTCCTCTTTTCAGTGGGAAGATTTCG
ATTTAGGCGTCGGTGGTGGTACAGACGGACAAGATAAGGAGTATGCTTTT
GAAGGGGAGGAAAGCATTGATAAGGAATCAAAGAGCCAGGGGCGTATTGG
CTCGAAAACAGCTATGCGCAAGCGAGATCAGGAAAGACTTCGAGAGCAAG
AAGAGCGTCTTCTCGACGCGGACACTCCTCCTGAAAGTGTAGAGGATTTC
GAACGATTAGTGCTCGCCAACCCCAATTCATCATTGATCTGGATCAGATA
CATGGCCTTTCAATTGTCTTTGGCAGATGTCGATGCAGCGCGAGCTTTGG
CTGAACGGGCGCTTCAAACCATTGTATTTCGGGAAGAAAGCGAAAAGCTC
AACGTGTGGGTTGCACGCTTAAATCTTGAGCATAGGTACGGTAACAAGGT
AACAGTGCTTGCTGTGCTTGAGAAAGCGGCTGAACAGAACAACCCCAAGC
ACGTGTACTTGCATGCTGCTGAAATGTATGAAAGAGCTGGTGAAGTAACC
GAAGCGGAGGAGATATTTAGAAACATCCTTGCGAAACGTTTCAAGTACAG
TAAAAAGGTATGGATGCGGTATCATCTTTTTGTACTGCAGCAAGATCCTA
CCGAAGCCATGGAATTATTGCGCAGATCGCTGCAATGTCTCTCCCGGCAC
AAACATGCCTTCGTCATATCCCACTACGCCCAAGCTGAGTTCGAGCATGG
ATCTGTCGATCGGGGGCGGACTATCTTTGATGGCCTCCTGAGCAGTTTCC
CAAAGCGCCTCGACTTGTGGAACATGTACGTGGACAAGGAAGTCAAGTCG
GGGCACATAGAAGCAGCCCGACGACTACTGGATCGCATGTGCACGCTACG
CCTCTCAGCGCAAAAGATGAAGAATGTTATGAAAAAATACGTGCAATTGG
AGCTAGTACATGGAGACATCCAGTCTGTTGAGCGGGTAAAGAGCAAAGCT
CGGGAGTTTGTGGAATCAAATCTCCATTACTAGACAACTTTCTCCCTGTA
GTCGTCATATCTCATGTTTTAAATGCTTAAGGAAACCAGAATAGCATTCA
AAGAAAGTACCCACAATTTCACTCATGTCGTGGTTGATCAAATAATGTGA
CGACAAATTGGAATATAACTTTGAGGTCAAAACGCCTGTCGCTAATGTGA
ATTACCCATCAAAAAACTTCCTGATTATACGATGGTATATTTGCGTGGGA
AATTTCTGCAGTACGTATGTCGCAATCATTTTATGATCCCCCACAAACCA
GCTCCTGAAGGCGATGCGATAAGCATGCAAGTGTTTCCTGGAAAATCAAC
TTGTCCTCTACCACCACCTTATATGCATAAGCGCGACGAATAAAATTTCT
CCGAAGGGTGGCTTTTTGCCGTTCAAAGCGTATTCTATCTTCT back to topprotein sequence of rna6751 >rna6751-protein ID=rna6751-protein|Name=rna6751|organism=Nannochloropsis gaditana|type=polypeptide|length=334bp
MTSNHDVEAEPDCFFNPDLFVNKSLVKVNYSIQDLEQQPVWVSAASCTDH
DQTGEIVWPISIFLSWFVAARRDLFRDQQVIELGAGCAGLPGLIASRFAK
DVLVTDGNYLVLETLQRNVAETRGIFRTITDHSCEPGEPVEPMFKSTCYG
QSTYDCSVGVGDEKALNNNSSAVAVSRDALTSCWHEKGKLETRTLLWGDK
ESVEAVVNEGWRPQILLGADIVCWIDFVTPLLQTVKFLFLHAPDRERAVL
FLGFVNRANSTERFLYAQARAFGMSVKRVPHETFMPIEKRCWPSELQTAQ
ELEVLSISLDPTLEGYDSPVSFEESRAYDWATPC back to topmRNA from alignment at CM002469.1:420791..422315+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6751 ID=rna6751|Name=rna6751|organism=Nannochloropsis gaditana|type=mRNA|length=1525bp|location=Sequence derived from alignment at CM002469.1:420791..422315+ (Nannochloropsis gaditana)
TGATTCAGGCCCGCAAGCATATCGTACGCAGAGctcagcccttcctccct
ggagGGAAGTATTTTGGGTATCATACATCTCAAATAACTCCAGACTGTCC
CTGCCCCTATGATACAACCTCCTCACACTCAACAATCCCTACGACGAATT
CTTTCAGACCGATATAAAGCACAAATGCGATAATGGAAGTCTCCTTGAAC
TGATGGGAGCATAAAACGATAGAGTCGCATATCTAAGAGCTATTCATTCT
TCGCCTGCCATGACGAGCAACCATGATGTAGAAGCGGAACCGGATTGTTT
TTTCAATCCGGATCTTTTCGTAAACAAATCACTTGTCAAGGTGAACTACT
CGATACAAGATCTTGAGCAGCAGCCGGTCTGGGTATCAGCAGCTTCGTGC
ACAGACCATGATCAAACTGGTGAAATTGTATGGCCGATATCAATTTTCTT
GTCCTGGTTTGTTGCTGCACGGCGGGACCTTTTTCGCGACCAACAAGTTA
TTGAATTGGGTGCAGGATGTGCAGGCTTGCCTGGTCTGATCGCTTCCCGC
TTCGCAAAAGATGTGCTTGTCACAGATGGGAACTACTTGGTCCTTGAGAC
CTTGCAGCGCAACGTGGCAGAAACAAGAGGCATCTTCAGGACTATCACTG
ACCACTCCTGCGAACCTGGCGAGCCAGTGGAACCCATGTTCAAATCCACG
TGTTACGGACAAAGTACTTATGACTGTAGTGTCGGCGTCGGGGATGAAAA
AGCATTGAACAACAATTCTAGCGCTGTCGCGGTCTCTAGGGATGCCCTGA
CATCTTGCTGGCACGAGAAGGGCAAGCTGGAGACCCGAACACTCCTGTGG
GGCGACAAGGAAAGTGTCGAGGCTGTCGTAAACGAAGGGTGGCGACCTCA
AATTCTTTTGGGAGCGGATATCGTATGTTGGATAGATTTTGTGACGCCCT
TGCTACAGACTGTCAAATTCTTGTTCTTGCATGCCCCAGACCGGGAACGC
GCGGTCCTCTTCTTAGGATTTGTGAATCGTGCGAACTCCACCGAGCGTTT
CCTGTATGCACAAGCGCGGGCATTTGGCATGTCGGTTAAAAGAGTGCCAC
ACGAAACATTTATGCCGATCGAAAAACGATGCTGGCCATCCGAGTTGCAG
ACAGCGCAGGAGCTCGAGGTTCTTTCTATTTCACTGGACCCGACGCTTGA
AGGATACGATTCTCCTGTGTCTTTCGAGGAAAGCAGAGCCTACGACTGGG
CGACACCGTGTTGATCAGATGAACTGTAGATAATTAACAGCAAGAAGCCA
GGATAAGAGGGAAGCGAGCGGATGCAGGATCTTGGTTGCGTACCCCCTTC
GCCGTCGCGgaacgaagaaaaaaaaatgtaaaATATACTTTCAAAAATAT
ACCCGAAGTTGTGAAACTTTTCTTTGCGCTGACCGGGATTCGAACCAGGA
AGGTTATGAGAGCTCCTTGAGAGCAGGCAAACTATCCTCCAAACCCGGGC
CTCCTCCTTACAGCGAATCGAACTC back to topCoding sequence (CDS) from alignment at CM002469.1:420791..422315+ >rna6751 ID=rna6751|Name=rna6751|organism=Nannochloropsis gaditana|type=CDS|length=1005bp|location=Sequence derived from alignment at CM002469.1:420791..422315+ (Nannochloropsis gaditana)
ATGACGAGCAACCATGATGTAGAAGCGGAACCGGATTGTTTTTTCAATCC
GGATCTTTTCGTAAACAAATCACTTGTCAAGGTGAACTACTCGATACAAG
ATCTTGAGCAGCAGCCGGTCTGGGTATCAGCAGCTTCGTGCACAGACCAT
GATCAAACTGGTGAAATTGTATGGCCGATATCAATTTTCTTGTCCTGGTT
TGTTGCTGCACGGCGGGACCTTTTTCGCGACCAACAAGTTATTGAATTGG
GTGCAGGATGTGCAGGCTTGCCTGGTCTGATCGCTTCCCGCTTCGCAAAA
GATGTGCTTGTCACAGATGGGAACTACTTGGTCCTTGAGACCTTGCAGCG
CAACGTGGCAGAAACAAGAGGCATCTTCAGGACTATCACTGACCACTCCT
GCGAACCTGGCGAGCCAGTGGAACCCATGTTCAAATCCACGTGTTACGGA
CAAAGTACTTATGACTGTAGTGTCGGCGTCGGGGATGAAAAAGCATTGAA
CAACAATTCTAGCGCTGTCGCGGTCTCTAGGGATGCCCTGACATCTTGCT
GGCACGAGAAGGGCAAGCTGGAGACCCGAACACTCCTGTGGGGCGACAAG
GAAAGTGTCGAGGCTGTCGTAAACGAAGGGTGGCGACCTCAAATTCTTTT
GGGAGCGGATATCGTATGTTGGATAGATTTTGTGACGCCCTTGCTACAGA
CTGTCAAATTCTTGTTCTTGCATGCCCCAGACCGGGAACGCGCGGTCCTC
TTCTTAGGATTTGTGAATCGTGCGAACTCCACCGAGCGTTTCCTGTATGC
ACAAGCGCGGGCATTTGGCATGTCGGTTAAAAGAGTGCCACACGAAACAT
TTATGCCGATCGAAAAACGATGCTGGCCATCCGAGTTGCAGACAGCGCAG
GAGCTCGAGGTTCTTTCTATTTCACTGGACCCGACGCTTGAAGGATACGA
TTCTCCTGTGTCTTTCGAGGAAAGCAGAGCCTACGACTGGGCGACACCGT
GTTGA back to top
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