EWM23934.1, cds6735 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23934.1 vs. NCBI_GenBank
Match: gi|585105219|gb|EWM23934.1| (methyltransferase-like protein 21a-like isoform 2 [Nannochloropsis gaditana]) HSP 1 Score: 693.73 bits (1789), Expect = 0.000e+0 Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0
Query: 1 MTSNHDVEAEPDCFFNPDLFVNKSLVKVNYSIQDLEQQPVWVSAASCTDHDQTGEIVWPISIFLSWFVAARRDLFRDQQVIELGAGCAGLPGLIASRFAKDVLVTDGNYLVLETLQRNVAETRGIFRTITDHSCEPGEPVEPMFKSTCYGQSTYDCSVGVGDEKALNNNSSAVAVSRDALTSCWHEKGKLETRTLLWGDKESVEAVVNEGWRPQILLGADIVCWIDFVTPLLQTVKFLFLHAPDRERAVLFLGFVNRANSTERFLYAQARAFGMSVKRVPHETFMPIEKRCWPSELQTAQELEVLSISLDPTLEGYDSPVSFEESRAYDWATPC 334
MTSNHDVEAEPDCFFNPDLFVNKSLVKVNYSIQDLEQQPVWVSAASCTDHDQTGEIVWPISIFLSWFVAARRDLFRDQQVIELGAGCAGLPGLIASRFAKDVLVTDGNYLVLETLQRNVAETRGIFRTITDHSCEPGEPVEPMFKSTCYGQSTYDCSVGVGDEKALNNNSSAVAVSRDALTSCWHEKGKLETRTLLWGDKESVEAVVNEGWRPQILLGADIVCWIDFVTPLLQTVKFLFLHAPDRERAVLFLGFVNRANSTERFLYAQARAFGMSVKRVPHETFMPIEKRCWPSELQTAQELEVLSISLDPTLEGYDSPVSFEESRAYDWATPC
Sbjct: 1 MTSNHDVEAEPDCFFNPDLFVNKSLVKVNYSIQDLEQQPVWVSAASCTDHDQTGEIVWPISIFLSWFVAARRDLFRDQQVIELGAGCAGLPGLIASRFAKDVLVTDGNYLVLETLQRNVAETRGIFRTITDHSCEPGEPVEPMFKSTCYGQSTYDCSVGVGDEKALNNNSSAVAVSRDALTSCWHEKGKLETRTLLWGDKESVEAVVNEGWRPQILLGADIVCWIDFVTPLLQTVKFLFLHAPDRERAVLFLGFVNRANSTERFLYAQARAFGMSVKRVPHETFMPIEKRCWPSELQTAQELEVLSISLDPTLEGYDSPVSFEESRAYDWATPC 334
BLAST of EWM23934.1 vs. NCBI_GenBank
Match: gi|301106590|ref|XP_002902378.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262098998|gb|EEY57050.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 167.933 bits (424), Expect = 1.699e-46 Identity = 114/332 (34.34%), Postives = 170/332 (51.20%), Query Frame = 0
Query: 4 NHDVEAEPDCFFNPDLFVNKSLVKVNYSIQDLEQQPVWVSAASCTDHDQTGEIVWPISIFLSWFVAARRDLFRDQQVIELGAGCAGLPGLIASRFAKDVLVTDGNYLVLETLQRNVAETRGIFRTITDHSCEPGEPVEPMFKSTCYGQSTYDCSVGVGDEKALNNNSSAVAVSRDALTSCWHEKGKLETRTLLWGDKESVEAVVNEGWRP-QILLGADIVCWIDFVTPLLQTVKFLFLHAPDRERAVLFLGFVNRANSTERFLYAQARAFGMSVKRVPHETFMPIEKRCWPSELQTAQELEVLSISLDPTLEGYDSPVSFEESRAYDWATPC 334
+HD + E FF+ DLFVN+ ++ ++Q+ + S A+ TDHD TG++VWP+SIFL+W++ A R+ + V+ELGAG AGL GL+AS+FA +TDGN +VLE L+ N AET N +SS V AL W G+++SVEA P IL+GAD++CW V P+LQT+K+L L + GFV RA STE+ L+ +A AFG +R+ +TF+P + PSE+ + +EL+++ +LDP ++ PV F ++ + T C
Sbjct: 7 HHDEDYEK--FFSADLFVNRDYESKEFNFGVVKQK-LLSSHAASTDHDLTGQVVWPVSIFLAWYLVAHRNEIVCKNVVELGAG-AGLSGLVASQFAAHTALTDGNDIVLELLEEN-AET--------------------------------------------NADSSKV----KALPLLW-------------GERQSVEAFEQAFPFPIDILIGADVICWPILVKPILQTIKYLLLRSRKPLETKFCCGFVCRAQSTEKLLFQEALAFGFHFERISEDTFLPTPR---PSEVISNRELQLIVFTLDPRAPNWNEPVRFADAELANIQTAC 269
BLAST of EWM23934.1 vs. NCBI_GenBank
Match: gi|567995316|gb|ETL45454.1| (hypothetical protein L916_04458 [Phytophthora parasitica]) HSP 1 Score: 150.984 bits (380), Expect = 4.372e-40 Identity = 103/326 (31.60%), Postives = 157/326 (48.16%), Query Frame = 0
Query: 14 FFNPDLFVNKSLVKVNYSIQDLE----QQPVWVSAASCTDHDQTGEIVWPISIFLSWFVAARRDLFRDQQVIELGAGCAGLPGLIASRFAKDVLVTDGNYLVLETLQRNVAETRGIFRTITDHSCEPGEPVEPMFKSTCYGQSTYDCSVGVGDEKALNNNSSAVAVSRDALTSCWHEKGKLETRTLLWGDKESVEAVVNEGWRP-QILLGADIVCWIDFVTPLLQTVKFLFLHAPDRERAVLFLGFVNRANSTERFLYAQARAFGMSVKRVPHETFMPIEKRCWPSELQTAQELEVLSISLDPTLEGYDSPVSFEESRAYDWATPC 334
FF+ DLFVN+ +Y Q+ + +Q + S A+ TDHD TG++VWP+S FL+W++ A RD + V+ELGAG AGL G LV + A T G D + + +E A N +S+ K++ LLWGD +SVEA + P +L+GAD+VCW V P+LQT+K+L L + + GFV RA STE L+ +A AFG +R+P +TF+P + P+ + + +EL+++ +LDP ++ PV F ++ + T C
Sbjct: 8 FFSTDLFVNR-----DYESQEFDFGVVKQKLLSSHAASTDHDLTGQVVWPVSAFLAWYLVAHRDEIAGKNVVELGAG-AGLSG-----------------LVASQFASHTALTDG-----------------------------NDIVLELLEENAETNANSS----------------KVQALPLLWGDHKSVEAFEHAFPYPVDVLIGADVVCWPMLVKPILQTIKYLLLRSNNPLETQFCCGFVCRAQSTEDLLFKEAVAFGFRFERIPDDTFLPTPR---PAHVTSNRELQLIVFTLDPNAPNWNEPVRFADAELTNLQTAC 262
BLAST of EWM23934.1 vs. NCBI_GenBank
Match: gi|673030218|ref|XP_008869070.1| (hypothetical protein H310_05974 [Aphanomyces invadans] >gi|574475465|gb|ETW02465.1| hypothetical protein H310_05974 [Aphanomyces invadans]) HSP 1 Score: 117.087 bits (292), Expect = 3.566e-27 Identity = 60/123 (48.78%), Postives = 81/123 (65.85%), Query Frame = 0
Query: 10 EPDCFFNPDLFVNKSLVKVNYSIQDLEQQPVWVSAASCTDHDQTGEIVWPISIFLSWFVAARRDLFRDQQVIELGAGCAGLPGLIASRFAKDVLVTDGNYLVLETLQRNVAETR---GIFRTI 129
+ D FFNP LF+N++ Y D +Q + S A+ TDHD TG++VWP+SI LSWFV + RDLFRD+ V+ELGAG AGL G +AS+FA +TDGN +VL L RN + G+F+ +
Sbjct: 9 DDDDFFNPALFLNENYTNTEYEFGD-TRQSLLSSKAASTDHDLTGQVVWPVSILLSWFVVSNRDLFRDKVVLELGAG-AGLAGFVASQFAARTAITDGNDVVLRLLDRNADQASTVCGVFKLL 129 HSP 2 Score: 88.5817 bits (218), Expect = 8.851e-17 Identity = 52/141 (36.88%), Postives = 77/141 (54.61%), Query Frame = 0
Query: 195 LLWGDKESVEAVVNEGWRP-QILLGADIVCWIDFVTPLLQTVKFLFLHAPDRERAVLFLGFVNRANSTERFLYAQARAFGMSVKRVPHETFMPIEKRCWPSELQTAQELEVLSISLDPTLEGYDSPVSFEESRAYDWATPC 334
LLWG+++SV + P ++LGAD+VCW + V PLL+T+K L V + GFV RA ST+ +AQA+ G + VPH+ F+P + P+ + + EL +L +SLD T PV F ++ D T C
Sbjct: 128 LLWGEEDSVIQFQKDFPYPVDVMLGADVVCWPNLVLPLLRTIKHLMHQHARPFEVVFYCGFVCRAQSTQDLFFAQAKIMGFKLWFVPHDDFLPTPR---PANVTSTMELNLLGLSLDTTAPLAMDPVVFCDNLQ-DLQTAC 264
BLAST of EWM23934.1 vs. NCBI_GenBank
Match: gi|698787682|ref|XP_009826873.1| (hypothetical protein H257_04170 [Aphanomyces astaci] >gi|574117962|gb|ETV83443.1| hypothetical protein H257_04170 [Aphanomyces astaci]) HSP 1 Score: 116.316 bits (290), Expect = 6.993e-27 Identity = 60/121 (49.59%), Postives = 82/121 (67.77%), Query Frame = 0
Query: 12 DCFFNPDLFVNKSLVKVNYSIQDLEQQPVWVSAASCTDHDQTGEIVWPISIFLSWFVAARRDLFRDQQVIELGAGCAGLPGLIASRFAKDVLVTDGNYLVLETLQRNVAETR---GIFRTI 129
D FFNP LF+N++ K Y D++Q + S A+ TDHD TG++VWP+SI LSWFVAA R LF+D+ V+ELGAG AGL G +AS+FA +TDGN +VL L +N + G+F+ +
Sbjct: 10 DDFFNPALFLNENYTKTEYDFGDIKQS-LLSSRAASTDHDLTGQVVWPVSILLSWFVAANRALFQDKVVLELGAG-AGLAGFVASQFASRTAITDGNDVVLRLLDQNADQASTPCGVFKLL 128 HSP 2 Score: 78.5666 bits (192), Expect = 4.247e-13 Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = 0
Query: 195 LLWGDKESVEAVVNEGWRP-QILLGADIVCWIDFVTPLLQTVKFLFLHAPDRERAVLFL-GFVNRANSTERFLYAQARAFGMSVKRVPHETFMPIEK 289
LLWG+++SV + P +LLGAD+VCW + V PLL+T+K L +H +R V+F GFV RA ST+ +AQA+ G + VPH F+P +
Sbjct: 127 LLWGEEDSVVQFQKDFPHPIDVLLGADVVCWPNLVLPLLRTIKHL-MHQSERPFDVVFYCGFVCRAQSTQDLFFAQAKGMGFKLWSVPHGDFLPTPR 222
BLAST of EWM23934.1 vs. NCBI_GenBank
Match: gi|669147814|ref|XP_008609469.1| (hypothetical protein SDRG_05528 [Saprolegnia diclina VS20] >gi|530739065|gb|EQC37307.1| hypothetical protein SDRG_05528 [Saprolegnia diclina VS20]) HSP 1 Score: 113.62 bits (283), Expect = 6.767e-26 Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 0
Query: 12 DCFFNPDLFVNKSLVKVNYSIQDLEQQPVWVSAASCTDHDQTGEIVWPISIFLSWFVAARRDLFRDQQVIELGAGCAGLPGLIASRFAKDVLVTDGNYLVLETLQRNVAETRG 124
D +FN LF+N++ Y D Q + S A+ TDHD TG++VWP+SI LSWFVAA +LFR + V+E+GAG AGL G +AS+FA +TDGN +VL L RNV T+
Sbjct: 8 DDYFNAALFLNENYTNTEYVFNDGIAQNLLSSKAASTDHDLTGQVVWPVSILLSWFVAANNELFRGKNVLEVGAG-AGLAGFVASQFAAHTAITDGNDVVLRLLTRNVEHTQA 119 HSP 2 Score: 101.679 bits (252), Expect = 1.963e-21 Identity = 54/139 (38.85%), Postives = 76/139 (54.68%), Query Frame = 0
Query: 185 HEKGKLETRTLLWGDKESVEAVVNEGWRP-QILLGADIVCWIDFVTPLLQTVKFLFLHAPDRERAVLFLGFVNRANSTERFLYAQARAFGMSVKRVPHETFMPIEKRCWPSELQTAQELEVLSISLDPTLEGYDSPVSF 322
H + LLWG+++SV A P I+LGAD+VCW + V PLL+T+K+L PD V + GFV RA ST L+AQA+ G + V H+TF+P + P + + +EL +L LD T PV+F
Sbjct: 116 HTQANCSIHKLLWGEEDSVVAFTQAFAHPIDIVLGADVVCWPNLVLPLLRTIKYLMHQTPDMFATVFYCGFVCRATSTRDLLFAQAKEMGFRLWTVDHDTFLPTPR---PENVLSVKELFLLGFRLDTTSPAATEPVAF 251
BLAST of EWM23934.1 vs. NCBI_GenBank
Match: gi|813146434|ref|XP_012199872.1| (hypothetical protein SPRG_05905 [Saprolegnia parasitica CBS 223.65] >gi|641535459|gb|KDO29369.1| hypothetical protein SPRG_05905 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 112.849 bits (281), Expect = 9.873e-26 Identity = 56/113 (49.56%), Postives = 73/113 (64.60%), Query Frame = 0
Query: 12 DCFFNPDLFVNKSLVKVNYSIQDLEQQPVWVSAASCTDHDQTGEIVWPISIFLSWFVAARRDLFRDQQVIELGAGCAGLPGLIASRFAKDVLVTDGNYLVLETLQRNVAETRG 124
D +FN LF+N++ Y D Q + S A+ TDHD TG++VWP+SI LSWFVAA LFR + V+E+GAG AGL G +AS+FA +TDGN +VL L RNV T+
Sbjct: 8 DDYFNAALFLNENYTNTEYVFNDNITQNLLSSKAASTDHDLTGQVVWPVSILLSWFVAANNHLFRGKNVLEVGAG-AGLAGFVASQFAAHTAITDGNDVVLRLLTRNVEHTQA 119 HSP 2 Score: 88.5817 bits (218), Expect = 9.096e-17 Identity = 53/141 (37.59%), Postives = 75/141 (53.19%), Query Frame = 0
Query: 185 HEKGKLETRTLLWGDKESVEAVVNE-GWRPQILLGADIVCWIDFVTPLLQTVKFLFLHA--PDRERAVLFLGFVNRANSTERFLYAQARAFGMSVKRVPHETFMPIEKRCWPSELQTAQELEVLSISLDPTLEGYDSPVSF 322
H + LLWG+++SV A + I+LGAD+VCW + V PLL + HA PD V + GFV RA ST L+AQA+A G ++ V H+TF+P + P + + +EL +L LD T PV+F
Sbjct: 116 HTQANCSIHKLLWGEEDSVVAFTHAFPHHVDIVLGADVVCWPNLVLPLLLS------HASVPDMFATVFYCGFVCRATSTRDLLFAQAKAMGFALWTVDHDTFLPTPR---PDNVLSVKELFLLGFRLDKTSPAASDPVAF 247
BLAST of EWM23934.1 vs. NCBI_GenBank
Match: gi|1173949889|gb|OQR97888.1| (hypothetical protein ACHHYP_09851 [Achlya hypogyna]) HSP 1 Score: 112.079 bits (279), Expect = 2.495e-25 Identity = 56/121 (46.28%), Postives = 80/121 (66.12%), Query Frame = 0
Query: 12 DCFFNPDLFVNKSLVKVNYSIQDLEQQPVWVSAASCTDHDQTGEIVWPISIFLSWFVAARRDLFRDQQVIELGAGCAGLPGLIASRFAKDVLVTDGNYLVLETLQRNVAET---RGIFRTI 129
D +FN LF+N++ Y + Q + S A+ TDHD TG++VWP+SI LSWFVA+ RDLFR + V+E+GAG AGL G +A++FA +TDGN +VL L+RNV T G+++ +
Sbjct: 10 DDYFNAALFLNENYTNTEYDFGGIRQN-LLSSKAASTDHDLTGQVVWPVSILLSWFVASNRDLFRGKTVLEVGAG-AGLAGFVAAQFAAHTAITDGNDVVLRLLRRNVEHTDANAGVYKLL 128 HSP 2 Score: 94.3597 bits (233), Expect = 7.520e-19 Identity = 52/139 (37.41%), Postives = 72/139 (51.80%), Query Frame = 0
Query: 185 HEKGKLETRTLLWGDKESVEAVVNEGWRP-QILLGADIVCWIDFVTPLLQTVKFLFLHAPDRERAVLFLGFVNRANSTERFLYAQARAFGMSVKRVPHETFMPIEKRCWPSELQTAQELEVLSISLDPTLEGYDSPVSF 322
H LLWG++ S P I+LGAD+VCW + V PLL+T+K L APD + GFV RA +T L+AQA+A G + V H+TF+P + P + + +EL +L LDP PV+F
Sbjct: 117 HTDANAGVYKLLWGEEASAVEFTEAFPHPVDIVLGADVVCWPNLVLPLLRTIKHLMHRAPDMFSTAFYCGFVCRATNTRDLLFAQAKAMGFRMWTVDHDTFLPTPR---PENVFSVKELFLLGFQLDPASPAATEPVAF 252
BLAST of EWM23934.1 vs. NCBI_GenBank
Match: gi|635363215|emb|CCI48204.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 110.153 bits (274), Expect = 1.522e-24 Identity = 55/109 (50.46%), Postives = 76/109 (69.72%), Query Frame = 0
Query: 12 DCFFNPDLFVNKSLVKVNYSIQDLEQQPVWVSAASCTDHDQTGEIVWPISIFLSWFVAARRDLFRDQQVIELGAGCAGLPGLIASRFAKDVLVTDGNYLVLETLQRNVA 120
D +F DLFV+K + DL QQ V S A+ TDHD TG++VWP+SIFLSW++ ++RD +D+ V+ELGAG GL GL+AS FA V +TDG+ +VL+ L++NV
Sbjct: 9 DSYFCADLFVSKEYETKVFDF-DLIQQKVLCSLAASTDHDLTGQVVWPVSIFLSWYLISQRDFLKDKTVLELGAG-VGLSGLVASHFADKVYLTDGSEVVLDLLEKNVG 115 HSP 2 Score: 82.0333 bits (201), Expect = 2.444e-14 Identity = 43/117 (36.75%), Postives = 71/117 (60.68%), Query Frame = 0
Query: 195 LLWGDKESVEAVVNE-GWRPQILLGADIVCWIDFVTPLLQTVKFLFLHAPDRERAVLFLGFVNRANSTERFLYAQARAFGMSVKRVPHETFMPIEKRCWPSELQTAQELEVLSISLD 310
L WGD +S++A + +L+GAD+VCW ++ PLL+TVK+ L + ++ GFV RA STE L+ QA+A G++ + V +TF+P+ PS +++ +L++L LD
Sbjct: 128 LRWGDHDSIQAFEQQMSSGVDVLIGADVVCWPLYIQPLLETVKYFLLKSSTPFQSKFLCGFVCRAKSTEDSLFQQAQATGLAFEEVQPDTFLPMP---IPSNVKSHMKLQILVFQLD 241
BLAST of EWM23934.1 vs. NCBI_GenBank
Match: gi|1173928685|gb|OQR82217.1| (hypothetical protein THRCLA_11043 [Thraustotheca clavata]) HSP 1 Score: 108.612 bits (270), Expect = 4.168e-24 Identity = 54/117 (46.15%), Postives = 76/117 (64.96%), Query Frame = 0
Query: 8 EAEPDCFFNPDLFVNKSLVKVNYSIQDLEQQPVWVSAASCTDHDQTGEIVWPISIFLSWFVAARRDLFRDQQVIELGAGCAGLPGLIASRFAKDVLVTDGNYLVLETLQRNVAETRG 124
+ E D +FNP LF+N++ Y + Q+ + AAS TDHD TG++VWP+SI LSWFVA +F+ + V+E+GAG AGL G +A++FA +TDGN +VL L+RNV T
Sbjct: 3 DNEYDDYFNPSLFLNENYTSTEYVFGSIHQKLLSSKAAS-TDHDLTGQVVWPVSILLSWFVATNAKIFQGKNVLEVGAG-AGLAGFVAAQFAAHTAITDGNDVVLRLLKRNVEHTNA 117 HSP 2 Score: 95.1301 bits (235), Expect = 4.081e-19 Identity = 50/139 (35.97%), Postives = 76/139 (54.68%), Query Frame = 0
Query: 185 HEKGKLETRTLLWGDKESVEAVVNEGWRP-QILLGADIVCWIDFVTPLLQTVKFLFLHAPDRERAVLFLGFVNRANSTERFLYAQARAFGMSVKRVPHETFMPIEKRCWPSELQTAQELEVLSISLDPTLEGYDSPVSF 322
H + LLWG+++SV V E I+LGAD+VCW + V PLL+T+K+L D + + + GFV RA +T L+ QA++ G + V H+ F+P + P + + +EL +L LDP+L PV F
Sbjct: 114 HTNANCDVLKLLWGEEDSVIEFVKEFPHDIDIILGADVVCWPNLVLPLLRTIKYLMHKTKDMYKPIFYCGFVCRATNTRDLLFEQAKSMGFKMWSVEHDKFLPSPR---PENVYSVKELFLLCFQLDPSLLASKEPVLF 249 The following BLAST results are available for this feature:
BLAST of EWM23934.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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