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Properties
| Property Name | Value |
|---|
| Product | trna guanosine-2 -o-methyltransferase trm11 |
| Orig transcript id | gnl|cribi|Naga_100027g36.167.mrna |
| Orig protein id | gnl|cribi|Naga_100027g36.167 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:360438..362085 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6729 ID=rna6729|Name=rna6729|organism=Nannochloropsis gaditana|type=mRNA|length=2032bp
GGCTGCCTGGCCGTTGACATCTTCACTTTCAAACTTCCCATTCCTTAGTT
CATGCTCCGCCCGCCGAGTTCTACCTCACCATGTTTCCAATACCATAGGA
TGACTAATGCAGGCGTGGACGAGAAGGGTGTGGTGGCGTCCTTTTGGCAT
ACATATCGGGTTGGTGCGTACATCACTCGCGAGTTGGCCAATGATGCGAG
TCTCATCGCATTCGAGCTAGGCGCCGGGTTCGCAGCAATCGTGGGCCTGG
GAGTGTACGAGGGGACGCTTGTTTCAAGGCAAGGCATGGACGGAGGCGCA
ATAAAAATGTCTCAGCCCTTGCGATATGCCTTGTGGACAGCCTTGCCCTG
TGCGGCAGGGCATATTTTGCCCTCAGGTGCAGTGCTGCGGAACTTGATGA
AGGTCCCTGCCACGACGACGCCATCGCTCATTTCAAGTATATCAGAGTCT
GCTGCTGCAGGCCCGGGCATGCTTAAGGTGAGAAATTTGCAAGCTGGACG
GCATGTGGTAGGCTTGGCGACATTGATTGGCACGACTCTGCAAGTTGGAG
CAAGCATCCAACGAGGCCGACAGTTTTACCGGGCACAAGTCCTGGATGGT
CGTGAGCCTCCACTGGCGCCGCCAGATGCTGTGCGCATTTCACATCGCCC
TCCAGCTTCTGCAGGCGACGCTCCAGCTTTTCATGTCGTTCTAATGGCCG
ATGCACAAGATAAATTGCCTTGGTGGGGAGAGGGGGGGAGAGTGTCCAGG
GCAATGCCGCACCGATGGTGGACAAGGGCACAATGGATCACGGATCCACG
GGAGTGGATGGGCCTACTGCCATCCCCCAATATTGCATCTCTCCGATACA
CAGATATGAGACCACTCTTTTTGGAGGCGGAGGTGTCAGCATCGTCTAGG
CCGCGCGGCTTGTCCCTGAACCTAGCCCTTGAAAGCCTCCGGGCTGGTGG
GCGCGCAGGCAGCCGCGGGCCCCGGGTGGTTGGCGGCGGCGAGGAAGGAG
TAGTGAGGGTACTGATGGCCAGTGGAGAGTGTCTTCGGTCGCCTACGCGG
CGTATGGTGGAAGAGAGTGGGGCAGTGGACCTGATGGTAGATGGAGAGGC
CGCGGTGGCGCTGGCGGCATTGGCTTGGATGGAGGAGACTCCCTACGCGT
CCGCTTGGTCCGCTCTCGCTGCCCAGCGGACGCGAGAGGAGGAGGCAAAG
ATCAGCGCCCGCCGGGAAGGGAGCTCAGTCTGGAAGGGTCTTGAGCAATG
GAACGCATGGGCGGAGCGCCTTCCCGTATCGGAGGCCGTCGGGAGGCCCT
GGCGGTGGCTGGCGGGAACATGGGAGACGATGGGTCGGCGGGTGCGGTGG
CTACTTAAGGGAGGGGTGACAGCTAGGGACGCATTGGAGGAGTACAAAGT
TGTAGTGCTGGTCCATGACGCGGACGCTCCGCGGCTGAGCCAGCGTCTTA
AGCTTAAGGAGCTCCTGCAGGCAGCCGGATGGGACGTGTGGGGGCCAGGC
ACGTCCGCATCGCGTCTGGTGGGGGACCGGGACGCCCTGGTGCCCGTGCT
GGTTTACTGCCAAGATGATGCTACCACGCTGGAGCGGGCGCGATTCCTGG
TCCGCGCCGGTAGGCCCCCGCAACTGACTTGCGCCCTGGTGGAAGACCCT
GAAAGCGCGTGTCCCTGGCTGGCCGGTGGAAGGCCGATCGTCGATGACCG
CGGCAGCGACACGGAGGCTAAGCCCACCATTTTGAGTGTGAGCGACGTGC
ACGACAAGATATTTGCCTTTATACGGGGCCGCGTCAAGGAAGGGAAATCA
ATCGCAGAAGTACAATCCGAGCTTGACGACTCGACCGGCTTGATGCCCTC
CAGCACGAGGCGGGAGTAATTAATGAGTATGATATACCTACTTGTACATT
TCAGTGCGTACAACAGTGACAGACAAAATCGCCGCCGGGAAATTTGGGCG
CTGGCTTGTAAGACAAAGTTAATGAGGGGCAAAAAATGGGAGTTTGCACA
CATAGACGAAATGAACTCAGAATTTTACCCCC back to topprotein sequence of rna6729 >rna6729-protein ID=rna6729-protein|Name=rna6729|organism=Nannochloropsis gaditana|type=polypeptide|length=522bp
MPQPQDEHHARRRGGEKLSYVLLFILLFLLPARSFQHGFHYQDLVIAFRH
PSRNTKGFCTGVEKNYVLPQFEFLAALNTSQCSTFAKSLALRPFFHSSTI
PFYSIRYGDDIVGPYFTKDLADVSRRCILTYGLFHLLAAGKNPSDTAASA
CKASNSKGYNHKKGMFSTTIPKYSLSTKLGKRWRVGVVGVSDQNEEILLS
SRQKENAVNAFQPFLHGTAGLDPTLRQLDERGPPPELDFFIFIFPKCGQV
LLCLRLAQGPGTGKGYTFASKPRRPRSGVLKALAAYREKATFISPTAMDP
ELAWVMNNMGGVRKRSRVFDPFMGSGSLLFTASLLGAEELFGSDAAQELM
GGESRVNKQLIIKSFAYDKNDFSQWVDSLTSPVPVLTQADILSRQLHPLF
RSGYYDSIVTDPPYNIKAKVFGKAETATDTKAATARQQTIIPVIFALIDI
AASVLVPGGRLVFFLPEWTKQDIGCNKKSDANILSYMLSRTPKAFKVVFT
LPQTFSPSFTRWLVCLEKSVNE back to topmRNA from alignment at CM002469.1:360438..362085+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6729 ID=rna6729|Name=rna6729|organism=Nannochloropsis gaditana|type=mRNA|length=1648bp|location=Sequence derived from alignment at CM002469.1:360438..362085+ (Nannochloropsis gaditana)
TTTAGATATTAGCCATGTCATCCACTCAGGTGATTTGATATAAAAATGCC
TCAGCCGCAAGATGAACATCACgcgcgaagaaggggaggggagaagctgT
CGtatgtcctcctcttcattcttctcttcttgttACCAGCTCGTAGCTTC
CAGCACGGATTTCATTATCAGGACCTAGTTATCGCCTTTCGTCATCCCAG
TCGTAACACCAAGGGTTTTTGCACGGGTGTCGAGAAGAACTACGTGCTGC
CGCAATTTGAATTTCTGGCGGCCTTAAATACCTCACAGTGCAGTACATTT
GCAAAAAGCTTAGCACTTAGACCATTTTTCCACTCTTCGACAATACCATT
TTACAGCATTCGGTATGGAGATGATATTGTAGGTCCGTATTTCACAAAAG
ACCTCGCGGACGTGTCGCGACGTTGCATTTTGACATACGGTCTCTTTCAT
CTCTTGGCAGCTGGCAAGAACCCCAGCGACactgctgcctccgcctgcaa
ggCGAGCAACAGCAAAGGATACAATCACAAGAAAGGAATGTTTTCGACCA
CGATCCCCAAATATTCTTTATCAACAAAGTTGGGGAAAAGATGGCGCGTG
GGGGTAGTAGGAGTTTCGGATCAGAACGAGGAAATTCTGTTGTCCTCTCG
TCAGAAAGAAAATGCTGTGAATGCATTTCAACCTTTTTTGCACGGCACCG
CTGGTCTTGATCCCACTTTACGACAATTAGACGAGAGAGGGCCTCCTCCT
GAGCTCgacttcttcattttcattTTCCCAAAATGTGGTCAGGTGCTTTT
GTGCCTCCGCTTGGCTCAGGGCCCCGGTACGGGCAAGGGCTACACGTTTG
CCTCAAAGCCTCGACGGCCCCGTAGTGGAGTATTAAAAGCACTGGCCGCT
TACAGAGAAAAGGCTACCTTCATTTCGCCTACAGCCATGGATCCCGAGCT
TGCGTGGGTAATGAATAACATGGGTGGGgtgaggaaaagaagcagagTGT
TTGACCCGTTCATGGGCTCGGGAAGTTTGCTCTTTACTGCGAGCCTGTTA
GGCGCCGAAGAGTTGTTTGGAAGCGATGCTGCACAAGAGCTCATGGGAGG
CGAAAGCCGTGTGAACAAGCAACTAATAATCAAGTCATTTGCATACGATA
AAAACGATTTCTCCCAGTGGGTAGACTCCTTGACGTCCCCAGTACCTGTT
CTTACTCAGGCAGACATACTTTCCCGTCAGCTTCATCCCCTGTTCCGCTC
CGGTTACTACGACAGCATTGTGACCGATCCGCCCTACAATATCAAGGCTA
AGGTGTTTGGAAAAGCAGAAACTGCGACAGATACGAAGGCAGCCACAGCT
CGTCAGCAGACTATCATACCTGTGATTTTCGCCCTAATTGATATTGCTGC
CAGTGTGCTGGTCCCAGGCGGGCGCCTCGTCTTTTTTTTGCCTGAATGGA
CCAAGCAGGATATTGGATGCAACAAGAAATCTGATGCCAATATACTCTCT
TACATGCTCTCGAGGACGCCCAAGGCTTTTAAAGTCGTCTTCACACTTCC
CCAaaccttttctccttcatttaCTCGCTGGCTTGTATGTCTTGAAAAAT
CTGTAAACGAATAAAGTCTTAACAGCTAACAACCAATTATAATGAATA back to topCoding sequence (CDS) from alignment at CM002469.1:360438..362085+ >rna6729 ID=rna6729|Name=rna6729|organism=Nannochloropsis gaditana|type=CDS|length=1569bp|location=Sequence derived from alignment at CM002469.1:360438..362085+ (Nannochloropsis gaditana)
ATGCCTCAGCCGCAAGATGAACATCACgcgcgaagaaggggaggggagaa
gctgTCGtatgtcctcctcttcattcttctcttcttgttACCAGCTCGTA
GCTTCCAGCACGGATTTCATTATCAGGACCTAGTTATCGCCTTTCGTCAT
CCCAGTCGTAACACCAAGGGTTTTTGCACGGGTGTCGAGAAGAACTACGT
GCTGCCGCAATTTGAATTTCTGGCGGCCTTAAATACCTCACAGTGCAGTA
CATTTGCAAAAAGCTTAGCACTTAGACCATTTTTCCACTCTTCGACAATA
CCATTTTACAGCATTCGGTATGGAGATGATATTGTAGGTCCGTATTTCAC
AAAAGACCTCGCGGACGTGTCGCGACGTTGCATTTTGACATACGGTCTCT
TTCATCTCTTGGCAGCTGGCAAGAACCCCAGCGACactgctgcctccgcc
tgcaaggCGAGCAACAGCAAAGGATACAATCACAAGAAAGGAATGTTTTC
GACCACGATCCCCAAATATTCTTTATCAACAAAGTTGGGGAAAAGATGGC
GCGTGGGGGTAGTAGGAGTTTCGGATCAGAACGAGGAAATTCTGTTGTCC
TCTCGTCAGAAAGAAAATGCTGTGAATGCATTTCAACCTTTTTTGCACGG
CACCGCTGGTCTTGATCCCACTTTACGACAATTAGACGAGAGAGGGCCTC
CTCCTGAGCTCgacttcttcattttcattTTCCCAAAATGTGGTCAGGTG
CTTTTGTGCCTCCGCTTGGCTCAGGGCCCCGGTACGGGCAAGGGCTACAC
GTTTGCCTCAAAGCCTCGACGGCCCCGTAGTGGAGTATTAAAAGCACTGG
CCGCTTACAGAGAAAAGGCTACCTTCATTTCGCCTACAGCCATGGATCCC
GAGCTTGCGTGGGTAATGAATAACATGGGTGGGgtgaggaaaagaagcag
agTGTTTGACCCGTTCATGGGCTCGGGAAGTTTGCTCTTTACTGCGAGCC
TGTTAGGCGCCGAAGAGTTGTTTGGAAGCGATGCTGCACAAGAGCTCATG
GGAGGCGAAAGCCGTGTGAACAAGCAACTAATAATCAAGTCATTTGCATA
CGATAAAAACGATTTCTCCCAGTGGGTAGACTCCTTGACGTCCCCAGTAC
CTGTTCTTACTCAGGCAGACATACTTTCCCGTCAGCTTCATCCCCTGTTC
CGCTCCGGTTACTACGACAGCATTGTGACCGATCCGCCCTACAATATCAA
GGCTAAGGTGTTTGGAAAAGCAGAAACTGCGACAGATACGAAGGCAGCCA
CAGCTCGTCAGCAGACTATCATACCTGTGATTTTCGCCCTAATTGATATT
GCTGCCAGTGTGCTGGTCCCAGGCGGGCGCCTCGTCTTTTTTTTGCCTGA
ATGGACCAAGCAGGATATTGGATGCAACAAGAAATCTGATGCCAATATAC
TCTCTTACATGCTCTCGAGGACGCCCAAGGCTTTTAAAGTCGTCTTCACA
CTTCCCCAaaccttttctccttcatttaCTCGCTGGCTTGTATGTCTTGA
AAAATCTGTAAACGAATAA back to top
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