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Properties
| Property Name | Value |
|---|
| Product | cytochrome c oxidase polypeptide vib |
| Orig transcript id | gnl|cribi|Naga_100027g31.154.mrna |
| Orig protein id | gnl|cribi|Naga_100027g31.154 |
| Gene | COX6b |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:352402..353121 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6724 ID=rna6724|Name=rna6724|organism=Nannochloropsis gaditana|type=mRNA|length=4674bp
GAATACGAATGATAGTCTAGGTCGGGAGTGCTACTTGGAGAAGCCAGCCA
TGGAGGCGGAAGGGAAGGCAGGAGGAGGTGGGGTGGCGGGGTGGAGGTGA
AGAGAAAGCGCCCGAATAGCGGTGCGCTGGGACTCCGCTACTGGGACGGG
GCCTCTGCAAGCTCTTAGTAAACCCCGTCACAACGTAGAGTGTGACCCTT
TGCACGGGAGCGATCATCTGGAGCTTTACCGCAGACATGTCACACTCCTT
GATCCTCTCTTCTATCAGCGTAGAGAGGACGCCATGGGAGATCGAACGGT
GAAGGGAGGGACCGCTCCTCACGAGTTCTACGTGTGCGCCTCTTGCTGGC
GCCTTTTGATGATATTCAATGCGACAATGGGTGGTATGGGTCATGTGGAG
CATGGGAAATGCGAGGTTGTGATCGTTTGTGGTGTGAAGATGTTGGAGGA
GACAAGTTGGAGCTTTGAAGCTCGTCTGTTATCCACGCTTGAGCTCATCC
ACGCCACCTACAAGAATAACGCTCGCGAAAAAGGGTGGTTGGCAGCAAAT
TTCTCGTATTTTAGAGACAGACCCCCCAGTCGATTCCAAAGAGTGAAGAC
GCCGGCACAGCAAAACCCAGACGTCTTCATTAATGCCTTTTGTGTGGCTT
CAAAACTCGTCAGAACTGCTTTGAAATTGTGTGATTCAATGCCATTCAGT
AGGTGCCCGAAGAATTGGCGGTATCTGATGGCGAAGTCTCGTGAAGCGTG
GTGCACTTTGCCTGTGCATGTGGCTGACTCAACCTTCCGAGGGCTGTGTT
TTGCCTCCCGCCAATGCTTGGAGGTCAATCGCTTTACACTGTATATTTGA
CCAACTCGTTTGCATCTCAAGCACTTCCTTTCATTTACGCCACGACTTTT
GTACATTGGACAGGCAAGTGGATGATCAGCGCGGCGAGAGGCGGACTCTA
GGCGATTAGGGGTTGCGCGGCAAAGCATAGGATCTGAAAGATCAGCAGGG
AGAGAGAATGGCCTCCAGCGGTGGCGGCAGTGTGGCGGCCACAGAGAGCA
TAGACCCGGAGGTAGAGAGGCTTCTCCGGTCCCCGGGCTTCTGGGCCAAG
CTGGGGCACCACCCCTACTGGCCAGCCCGAGCAGCCTCCAAGGAGGAGCA
GCGCCGTTACTCCTCCTACCAGCGGAAAGCTACACAGGTGTGCGTCAAAT
TTTTCGGCTCCAACGACATCGGATGGATTCACCCTGCCTCACTCGTCAAC
TTCGACGAGGGGCTGCGCAGGAGTTTTAACACAAACTCCAAGGTCACGAA
GAACGTGAAATTTGTGGCGGGAGTGGAAGAGGCCATCCGCCTCTGGAAAG
AGAGACATGAGCCGCAGTTCCCGGGCGTTACCTCGCCTACCTGGCCTCAC
GCCCCCCCACACTCGGCTGGCGGGGCGCCCCCACCACACACCCGGGCTCA
AGCTGCTGCCGTTGCTGCGGTCACCGGAGGAGCGTGTGCAAACGGGATTG
AGGCGCATGCATCCGCTCTAGGGGCAGTCTGGACACACGGACTCCCAGAG
AGTTGTCTTGGCTGCACTTTTCCACGCGGGGAGGAACCTGGCTTTCTCCT
CTGTCGGTCTTGCGGATCAGGATACCATTCTAGGTGCGCTTCGATGGAGA
GAACGGGGGCCGCTCGTGGAGTAGAGGCTGATAAGGAGGGAAGTCAGGCC
AAAGCCACGTCTCCACGGTGCCGGCTTTGCAGCGATGGGGGGTCAATGAT
CTTGGCACCAGCGCCACTGCCCTTCCGCCAAGCTTGGTCCCCGATGCCAG
GGACGGCTGGCAGTGCAGACAGCGGGATGCAGCGGCACCAGTCTCACATG
CGGGGGCCCCATCAGCAGCGCTCCCAACACGATCATCTTCCCCAGATCTC
TCCCGTCGCCAACGGCCTCACAACGGGTCTCAGTTCCGAGGAGCGGGGAG
CTCAGCGCGGGCTCGAACGGCGATGGGGGGGTTTCGACAGCGCAGCAGCG
GCTTCGGACATGAAGAAACGGCGGGAGGCGTTAGCGATGATGGCGGCCGC
GGAGAAGAGAGCGCGATGGAGCGCTTGGGGCGGGAGTTTTGGGGAAGGGT
TTGCGGGCCGGGAGTGTTTGGGTGTGGGTGCAGGAAGCAGTAGCTCGGAC
GACTCTGAGTTCGAGTGTTTCATTTGTACGGAGCCAGGTATGCTTATTCA
GTGCGATGCTCCAGCTTGTCGAAAGGTCTACCACAAGCCGTGCCTGGGCT
TCGCCACATGGGGCGATCATTTCTTTTGCCCGCGCCACCGATGCGCTGTT
TGCCGCATTTCGGAAGCGGACCTGGACGCAAAGGCGAAGCAAGGGATGGC
GGGGACGGCCCCCGTAGGGGAGATGAAGGTCGCTGCTTTGGGTAACGGAA
GCCTTACTACCCACACGCGTGGGGCTTCGGATCATAACGGAGGGGAAACA
ACATTAGCTCCCGAGGCGGAGAAGCGAAGCACAGTGCCCGAGGGGTCGAC
CTCCAGCAGCAAAACGAGTAAGACCAAGAGGGATCAGTGCGAACCAACGG
GAGATGAACGTCGGCTGTGGAAATGTGGGTCGTGTCCGCTCGCCTACTGT
CCCTCCCACCTTCCCCCCGCTTTGGCTCCAATGGTAGCCCCGGTAACCAT
GATGGGGAAGCAAAAAGTCTCAAACGAGGACTCAAACCAGTGCATTAACT
GCAAGAATCCACCGCCGAGAATACAGCTGGCTGTACTACTAGAACGCTCG
TGGGCTAGGCTCGCCACCAACTACCTGGCTTTGCCATTCATGCGGCCCTT
TTTAAATGGTGCGGTACGATCCAAGTCCAACAGAAGGAGCAAGGCCGGGG
GCAATGATAGGGATGAGGACGCTCTTTTGGACGTAGTAGGGATTGCTCAT
CGAATTCGTACAGGACACTACCAAACCGCGGACGAGTATTTGCATGATTT
GGACGTGCTGCGAGAACAGGTGTTCAATTTCTCGCCGACAGAAGAGGGCG
GCCGGAGCGTCGGTGAAGCAGACAAAGATACGAGCATTTTGCCGATACTG
GAGGCCTTGGACACCCTCCGAGGCAACGCTGGGCGCTATGTGGAGTCCAT
TCGGAAAAAAATCGCACCTGCGGAGGCGCTGATCGAAGAAGAGGAAAAGC
AGATGTCGCGGGGAAGCGGGCTGACAGGTAGCAAGGCAGCCTCGGGAAAC
GACACTGGTGGTGGGAGTGGCGTCGCCTGGCGGGCAGAGCTTGTGGAAAT
CAAAGGATTGCAGTGGGGTAGCGTTGGAGAGTTTACGCCGGCCAAGCCTT
TGGAAGAATGGGCCGAGTATGTGCGAATGGCACCAATGTTACATGCCTCT
ACGCAACGGCCTTTTCCCGACATGTCGGAGGAGGCGGAGCGCGAAGACAT
GGAGAGGGGGGAGGTGGCGCGGGTCATCGCCCAGCTAAGGTTCGAAGACT
CCTTCCCTTACAAGACCTCCATGTCACAACGAGATCATCTCGAGGGAGCA
CTAGAGGAGCAAGCCACCCTGCTGCGACGGTGTCTGGAGGGGCACGCTCA
GCTGCGTCGTAGCATTGCAAATGAGAAGGCGGTGGTCTTGGAACTCCCGG
GGAAAGAAGCGCGAAGACGGAAGAAGCGCTCACGAGACGAGGTGGAAGGC
GGTTCGAGGGAAGGCGGGCTTGGGAGAGAGGATGGAGAGGAAGTGAACGG
ATGGGATGACGATGACCATGTTGTGACCTTGGGTGACATGCACATCCTGA
AGGAATTCCAGGTCGCAAATCAGAATCTGCGTGCTCGTCTTAAGAGCAAG
AACGCTTTGTTGCGGCAACGTGAGGCCCAGTTGTGGGCGGCCGAGAAGGA
ATTTTTGGACCTGCAGGGGCAGAATAGCAGGTTGCAGGAGGAGCTTGCGC
AGGCCTTGGTCCGAATTAGTGAGGGGAATAAGGCGGCAGAGCCAGGGGAG
CAGGGCACGTCAGGAGGAACTGTGCCTGTAGTAAAAGCCACTGCCTTATC
CACCGCCAGAAATGAGGAAGAAGCGACGCAGCAAATTGAGACGGTGGATT
GCTTCAAGCGCCATGAAGGCAAGCAGGAGGACGGGATGAGAGTCCAGACT
CCCCCCTCGGTAGTCACCCCCGGGGCAATTCACGCTCCTCGGCCGTCAGA
CGGTCGGGGCGTGGAGCGATGCGAAGTGGAAGATGAGCAGGGCGATGGAG
ACGGCGGTGCTTCTCCGCCCGTTACGGAGTCAGCCACCACGACTCTTTTG
AACAGTAGCAGCAGCAGCACAAAGAGTGCTGAGGTCGAGGCAGAGGACGC
CCACACCTTTTCGTGATCCTTTCTCCGCCGTTTTGCATGTAGATGTCGTC
GACGACCAGAAGGTGATGCAAATATCTGATTTTGTCGGTTTCAATCACAC
CCTGATACGAAAGCATGGTAGCGACAGCATCAATATAGGCACTTTGCGCT
GATCGCGACGCCTCAAATGCGACGTGGGAGAGATTATTAGAGAGAAACCT
TTTGGAATAGTGCACAAATGATAAGCCTACGATCACAACATGAAGAAAAT
AGCTGCCATCTGATCGCAAAATGGAAATACGATGACGCTCTGTCAGGTGG
TAAATGTTGTGTTTATATCTATTGTCCTTTGTGCCGAGTATCGAATGGCA
GAGAACGAGAAGAGAGGTCTTGTC back to topprotein sequence of rna6724 >rna6724-protein ID=rna6724-protein|Name=rna6724|organism=Nannochloropsis gaditana|type=polypeptide|length=136bp
MSTLEVTDLPVPAKDERFPSVNQALNCWNKYNEWVLCLKKNEKDESKCFL
PRFNMRELCPTEWVEKWDADRGEGKFAGLQEDDAVEKVWIRVGVECAGIG
AEGDDKSRKISSLKATISARSLNDDPAVAVLKWILV back to topmRNA from alignment at CM002469.1:352402..353121- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6724 ID=rna6724|Name=rna6724|organism=Nannochloropsis gaditana|type=mRNA|length=720bp|location=Sequence derived from alignment at CM002469.1:352402..353121- (Nannochloropsis gaditana)
ATGTCCACTCTCGAAGTCACGGACTTGCCAGTGCCTGCTAAGGATGAGCG
CTTCCCCTCCGTCAATCAGGCTCTAAACTGCTGGTACGTGACGAGGTTCA
GGGTGAGAGCGCAGGGAAGTGCTATGTAAACGTGTATGGAGTGTGCGTGA
AACTAATAAGTGCGTTAACTCATTAAGCTGCAATTGAACTTGGGGGGGTG
TTTTTCGTGCATCGTTAGGCGTGGTAATTTAGGAATAAACTGGGCTCTCC
ATTATTTTGCTCATTTGTTGGTAGGAAACACTTCATCGCACTGAAGTAAG
CAAGAATCTCATGACTCCGCCCGCACATATAGGAACAAATACAACGAGTG
GGTTCTATGCCTGAAAAAAAATGAGAAAGATGAGAGCAAATGCTTTTTGC
CGCGCTTTAATATGCGTGAATTGTGCCCAACGGAATGGGTTGAGAAGTGG
GATGCCGACCGGGGCGAAGGCAAATTTGCGGGCCTTCAAGAGGACGACGC
GTGAGTTGCATGCATTTTGTCGTTTGTTGGTTGGGTTGCTACCGGGTCTC
TGGGATGAAGCGTGGAGAAAGTGTGGATACGAGTTGGGGTAGAGTGTGCA
GGGATAGGAGCGGAGGGGGATGACAAGAGTAGGAAAATCTCGAGTCTGAA
GGCCACGATCAGCGCACGCAGCTTAAATGACGACCCCGCCGTAGCTGTAC
TTAAGTGGATATTGGTTTGA back to topCoding sequence (CDS) from alignment at CM002469.1:352402..353121- >rna6724 ID=rna6724|Name=rna6724|organism=Nannochloropsis gaditana|type=CDS|length=1233bp|location=Sequence derived from alignment at CM002469.1:352402..353121- (Nannochloropsis gaditana)
CGTGGAGAAAGTGTGGATACGAGTTGGGGTAGAGTGTGCAGGGATAGGAG
CGGAGGGGGATGACAAGAGTAGGAAAATCTCGAGTCTGAAGGCCACGATC
AGCGCACGCAGCTTAAATGACGACCCCGCCGTAGCTGTACTTAAGTGGAT
ATTGGTTTGAGAACAAATACAACGAGTGGGTTCTATGCCTGAAAAAAAAT
GAGAAAGATGAGAGCAAATGCTTTTTGCCGCGCTTTAATATGCGTGAATT
GTGCCCAACGGAATGGGTTGAGAAGTGGGATGCCGACCGGGGCGAAGGCA
AATTTGCGGGCCTTCAAGAGGACGACGCATGTCCACTCTCGAAGTCACGG
ACTTGCCAGTGCCTGCTAAGGATGAGCGCTTCCCCTCCGTCAATCAGGCT
CTAAACTGCTGCGTGGAGAAAGTGTGGATACGAGTTGGGGTAGAGTGTGC
AGGGATAGGAGCGGAGGGGGATGACAAGAGTAGGAAAATCTCGAGTCTGA
AGGCCACGATCAGCGCACGCAGCTTAAATGACGACCCCGCCGTAGCTGTA
CTTAAGTGGATATTGGTTTGAGAACAAATACAACGAGTGGGTTCTATGCC
TGAAAAAAAATGAGAAAGATGAGAGCAAATGCTTTTTGCCGCGCTTTAAT
ATGCGTGAATTGTGCCCAACGGAATGGGTTGAGAAGTGGGATGCCGACCG
GGGCGAAGGCAAATTTGCGGGCCTTCAAGAGGACGACGCATGTCCACTCT
CGAAGTCACGGACTTGCCAGTGCCTGCTAAGGATGAGCGCTTCCCCTCCG
TCAATCAGGCTCTAAACTGCTGCGTGGAGAAAGTGTGGATACGAGTTGGG
GTAGAGTGTGCAGGGATAGGAGCGGAGGGGGATGACAAGAGTAGGAAAAT
CTCGAGTCTGAAGGCCACGATCAGCGCACGCAGCTTAAATGACGACCCCG
CCGTAGCTGTACTTAAGTGGATATTGGTTTGAGAACAAATACAACGAGTG
GGTTCTATGCCTGAAAAAAAATGAGAAAGATGAGAGCAAATGCTTTTTGC
CGCGCTTTAATATGCGTGAATTGTGCCCAACGGAATGGGTTGAGAAGTGG
GATGCCGACCGGGGCGAAGGCAAATTTGCGGGCCTTCAAGAGGACGACGC
ATGTCCACTCTCGAAGTCACGGACTTGCCAGTGCCTGCTAAGGATGAGCG
CTTCCCCTCCGTCAATCAGGCTCTAAACTGCTG back to top
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