rna6708, rna6708 (mRNA) Nannochloropsis gaditana

Overview
Namerna6708
Unique Namerna6708
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length736
Alignment locationCM002469.1:311845..313452 -

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Properties
Property NameValue
Productglutaryl- mitochondrial precursor
Orig transcript idgnl|cribi|Naga_100027g14.124.mrna
Orig protein idgnl|cribi|Naga_100027g14.124
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:311845..313452 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100027g14gene6486Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23946.1cds6692Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6708rna6708-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6708 ID=rna6708|Name=rna6708|organism=Nannochloropsis gaditana|type=mRNA|length=736bp
TCTACAGGTCGGAGATATTTCCCTCTTCATGTTGTCGGGTCTGTTTTCTT
CGAAGCCCACGTGCCTGGCCTTCAAGGTCTTATTTCTGACATCGTTGGCA
TCTTCGTCAGCATTCGCTTTGCCGCGCACGCTTTACGATTTCAGCTTGAA
AGATGGCACGGGGAAAACTCAGAGCTTGTCCGTCTACAAAGATAAGCCAG
TCGTGTTAATTGTTAATGTGGCGAGTAGATGCGGGTACACGGACTCAAAC
TATCGACAGCTTCAAGTGTTACAGGAAAAGTACGGGGATGACGGGCTGCA
GGTCTTGGCCATGCCCAGCAACGAGTTCGGAGGCCAGGAACCCGGGTCGG
ACGCGGAAATCCTCAAGTTTACGAAAGAGAAGTATGCGGTCACCTTCCCT
GTATTTAGCAAGCTGCTAGTCAACGGACCTCAGGCCTCGGACCTCTACAA
ATGGCTGAAGGCGGAGACCCCCAAGGACTCCTCGTCATCCAGCGCCGACA
TCCGCTGGAATTTCACCAAGTTCTTGCTCGTCAACGGTCTGCCCGTGAAG
CGCTTCGCCCACAACCAAGCCCCGAACGACTTCGAAGGCGAGATCCTCCA
GGCGCTGCGTGATGCGGCATCCAAGGAACTCTAGGGAAGAAGAGGCCCGC
GTTCTTACACAGCGACGACTCACTCGGGCAGGCGCGGTGGTTCCACCGCT
AATATTTCAAAAGCAAGAGCACGAAGTTACAGGTTT
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protein sequence of rna6708

>rna6708-protein ID=rna6708-protein|Name=rna6708|organism=Nannochloropsis gaditana|type=polypeptide|length=442bp
MLRRILPVCLRPLPGFTRAFGTVPVDLPEHPPTVNASTDKQRYDWQDPLL
LRAQLTEEEGMIQDMARAYCQQSLQPRILHANRHEEFDRKIMTEMGELGL
LGPTIRGYGCSGVGYVAYGLIAREVEAVDSAYRSAMSVQSSLVMHPIYTF
GTKEQKEKYLPGLAKGALVGCFGLTEPNHGSDPGGMETRARKQPDGGYVL
SGSKNWITNSPIADVFVVWAKDDEGVIRGFVLERGMKGLTAPKIEGKFSL
RASTTGMIVMDDVEVPASNLLPLARGLGGPFSCLNSARYGISWGSMGAAA
FCMSTALAYVLERSQFGAPLASNQLIQRKLADMDTDIALALQGSLRVGRL
LDEGRAVPEMVSLVKRNNCGKALNIARSARDMLGGNGISDEYHVIRHMMN
LEAVNTYEGTHDVHALILGRAITGIPAFVPRNSYPKAQKRES
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mRNA from alignment at CM002469.1:311845..313452-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6708 ID=rna6708|Name=rna6708|organism=Nannochloropsis gaditana|type=mRNA|length=1608bp|location=Sequence derived from alignment at CM002469.1:311845..313452- (Nannochloropsis gaditana)
TTGTCCGTGATGGCGGCTATGGTAGAGAGCTCCCTCGCCAGGGGCACGGT GACGTCTGTCAGCGAGCAACTTGAGCCTCGAGTGTTCCGGAGGAAGGCTG GGCGGGCGAATTGAAAGGCACATTCCCACGACACACCACATTGCTCCACA CAGATTTCATTCTTCAAGCTCAGTGCTACGTACATCTCGCGAGTCAGCAC TCTATCAAAGCCGCAAGGAACATGCTGCGGCGCATCCTACCCGTCTGCCT CCGTCCCCTCCCAGGTTTCACACGAGCCTTTGGCACTGTGCCTGTTGACC TTCCTGAGCACCCACCGACCGTGAATGCCTCGACAGATAAGCAGCGCTAC GATTGGCAGGACCCTTTGCTCTTACGAGCTCAACTGACAGAAGAGGAAGG CATGATTCAGGACATGGCCCGTGCCTACTGTCAACAGAGCCTGCAACCCC GCATCTTGCACGCAAACCGTCACGAGGAGTTCGACAGGAAGATTATGACC GAGATGGGCGAGCTAGGATTGCTGGGGCCAACAATTCGAGGCTACGGATG TTCCGGGGTAGGCTATGTAGCGTATGGCTTGATTGCCCGCGAGGTGGAGG CTGTGGACAGCGCCTATCGTTCCGCTATGAGCGTGCAGTCGTCCCTGGTG ATGCACCCCATCTACACGTTCGGCACTAAGGAACAAAAAGAAAAGTATCT GCCAGGACTGGCCAAGGGCGCTCTGGTGGGCTGTTTCGGCCTGACGGAGC CCAACCACGGGTCGGATCCGGGGGGCATGGAGACGAGGGCGCGGAAGCAG CCGGACGGGGGCTACGTCCTGAGCGGCTCCAAGAACTGGATCACTAACTC CCCGATAGCCGACGTCTTCGTGGTATGGGCGAAGGACGACGAGGGCGTGA TTCGGGGTTTCGTGTTGGAGAGAGGGATGAAGGGATTGACAGCGCCCAAA ATCGAAGGGAAGTTCTCTCTCCGGGCCTCGACCACAGGCATGATTGTGAT GGACGACGTCGAGGTGCCGGCTAGTAACCTCCTGCCACTGGCTCGTGGGT TGGGAGGGCCTTTCTCCTGCCTGAACAGTGCGCGGTACGGCATCTCCTGG GGGAGCATGGGCGCGGCCGCCTTCTGCATGTCGACTGCCTTGGCGTACGT TCTGGAGCGTAGTCAGTTCGGGGCCCCGCTAGCGAGCAATCAGCTCATAC AAAGGAAACTGGCTGATATGGACACGGACATCGCTCTGGCGCTGCAAGGA TCACTACGGGTGGGGAGGCTGCTCGACGAGGGGCGTGCGGTTCCCGAGAT GGTCTCCTTGGTGAAGCGGAACAATTGCGGGAAGGCTTTGAACATTGCGA GGAGCGCCCGGGACATGCTAGGAGGCAATGGCATATCGGACGAGTATCAC GTCATTCGTCACATGATGAATTTGGAGGCTGTCAACACTTATGAAGGCAC ACACGACGTACACGCCCTCATCCTCGGCCGCGCCATCACCGGAATCCCTG CCTTTGTTCCTCGAAATAGTTATCCGAAGGCCCAAAAACGCGAGTCTTAA TGTAAAATAAGTACCTCCCTAGGAACACCAAGAAGAATAAGGTTCTTGAT CTTTCTGT
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Coding sequence (CDS) from alignment at CM002469.1:311845..313452-

>rna6708 ID=rna6708|Name=rna6708|organism=Nannochloropsis gaditana|type=CDS|length=1329bp|location=Sequence derived from alignment at CM002469.1:311845..313452- (Nannochloropsis gaditana)
ATGCTGCGGCGCATCCTACCCGTCTGCCTCCGTCCCCTCCCAGGTTTCAC
ACGAGCCTTTGGCACTGTGCCTGTTGACCTTCCTGAGCACCCACCGACCG
TGAATGCCTCGACAGATAAGCAGCGCTACGATTGGCAGGACCCTTTGCTC
TTACGAGCTCAACTGACAGAAGAGGAAGGCATGATTCAGGACATGGCCCG
TGCCTACTGTCAACAGAGCCTGCAACCCCGCATCTTGCACGCAAACCGTC
ACGAGGAGTTCGACAGGAAGATTATGACCGAGATGGGCGAGCTAGGATTG
CTGGGGCCAACAATTCGAGGCTACGGATGTTCCGGGGTAGGCTATGTAGC
GTATGGCTTGATTGCCCGCGAGGTGGAGGCTGTGGACAGCGCCTATCGTT
CCGCTATGAGCGTGCAGTCGTCCCTGGTGATGCACCCCATCTACACGTTC
GGCACTAAGGAACAAAAAGAAAAGTATCTGCCAGGACTGGCCAAGGGCGC
TCTGGTGGGCTGTTTCGGCCTGACGGAGCCCAACCACGGGTCGGATCCGG
GGGGCATGGAGACGAGGGCGCGGAAGCAGCCGGACGGGGGCTACGTCCTG
AGCGGCTCCAAGAACTGGATCACTAACTCCCCGATAGCCGACGTCTTCGT
GGTATGGGCGAAGGACGACGAGGGCGTGATTCGGGGTTTCGTGTTGGAGA
GAGGGATGAAGGGATTGACAGCGCCCAAAATCGAAGGGAAGTTCTCTCTC
CGGGCCTCGACCACAGGCATGATTGTGATGGACGACGTCGAGGTGCCGGC
TAGTAACCTCCTGCCACTGGCTCGTGGGTTGGGAGGGCCTTTCTCCTGCC
TGAACAGTGCGCGGTACGGCATCTCCTGGGGGAGCATGGGCGCGGCCGCC
TTCTGCATGTCGACTGCCTTGGCGTACGTTCTGGAGCGTAGTCAGTTCGG
GGCCCCGCTAGCGAGCAATCAGCTCATACAAAGGAAACTGGCTGATATGG
ACACGGACATCGCTCTGGCGCTGCAAGGATCACTACGGGTGGGGAGGCTG
CTCGACGAGGGGCGTGCGGTTCCCGAGATGGTCTCCTTGGTGAAGCGGAA
CAATTGCGGGAAGGCTTTGAACATTGCGAGGAGCGCCCGGGACATGCTAG
GAGGCAATGGCATATCGGACGAGTATCACGTCATTCGTCACATGATGAAT
TTGGAGGCTGTCAACACTTATGAAGGCACACACGACGTACACGCCCTCAT
CCTCGGCCGCGCCATCACCGGAATCCCTGCCTTTGTTCCTCGAAATAGTT
ATCCGAAGGCCCAAAAACGCGAGTCTTAA
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Synonyms
Publications