EWM23946.1, cds6692 (CDS) Nannochloropsis gaditana

Overview
NameEWM23946.1
Unique Namecds6692
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:311903..313231 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23946.1
Productglutaryl- mitochondrial precursor
Orig transcript idgnl|cribi|Naga_100027g14.124.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:311903..313231 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006629lipid metabolic process
GO:0009056catabolic process
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
GO:0003995acyl-CoA dehydrogenase activity
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660flavin adenine dinucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR009100AcylCoA_DH/oxidase_NM_dom
IPR006089Acyl-CoA_DH_CS
IPR009075AcylCo_DH/oxidase_C
IPR006091Acyl-CoA_Oxase/DH_cen-dom
IPR013786AcylCoA_DH/ox_N
Homology
BLAST of EWM23946.1 vs. NCBI_GenBank
Match: gi|585105232|gb|EWM23946.1| (glutaryl- mitochondrial precursor [Nannochloropsis gaditana])

HSP 1 Score: 914.45 bits (2362), Expect = 0.000e+0
Identity = 442/442 (100.00%), Postives = 442/442 (100.00%), Query Frame = 0
Query:    1 MLRRILPVCLRPLPGFTRAFGTVPVDLPEHPPTVNASTDKQRYDWQDPLLLRAQLTEEEGMIQDMARAYCQQSLQPRILHANRHEEFDRKIMTEMGELGLLGPTIRGYGCSGVGYVAYGLIAREVEAVDSAYRSAMSVQSSLVMHPIYTFGTKEQKEKYLPGLAKGALVGCFGLTEPNHGSDPGGMETRARKQPDGGYVLSGSKNWITNSPIADVFVVWAKDDEGVIRGFVLERGMKGLTAPKIEGKFSLRASTTGMIVMDDVEVPASNLLPLARGLGGPFSCLNSARYGISWGSMGAAAFCMSTALAYVLERSQFGAPLASNQLIQRKLADMDTDIALALQGSLRVGRLLDEGRAVPEMVSLVKRNNCGKALNIARSARDMLGGNGISDEYHVIRHMMNLEAVNTYEGTHDVHALILGRAITGIPAFVPRNSYPKAQKRES 442
            MLRRILPVCLRPLPGFTRAFGTVPVDLPEHPPTVNASTDKQRYDWQDPLLLRAQLTEEEGMIQDMARAYCQQSLQPRILHANRHEEFDRKIMTEMGELGLLGPTIRGYGCSGVGYVAYGLIAREVEAVDSAYRSAMSVQSSLVMHPIYTFGTKEQKEKYLPGLAKGALVGCFGLTEPNHGSDPGGMETRARKQPDGGYVLSGSKNWITNSPIADVFVVWAKDDEGVIRGFVLERGMKGLTAPKIEGKFSLRASTTGMIVMDDVEVPASNLLPLARGLGGPFSCLNSARYGISWGSMGAAAFCMSTALAYVLERSQFGAPLASNQLIQRKLADMDTDIALALQGSLRVGRLLDEGRAVPEMVSLVKRNNCGKALNIARSARDMLGGNGISDEYHVIRHMMNLEAVNTYEGTHDVHALILGRAITGIPAFVPRNSYPKAQKRES
Sbjct:    1 MLRRILPVCLRPLPGFTRAFGTVPVDLPEHPPTVNASTDKQRYDWQDPLLLRAQLTEEEGMIQDMARAYCQQSLQPRILHANRHEEFDRKIMTEMGELGLLGPTIRGYGCSGVGYVAYGLIAREVEAVDSAYRSAMSVQSSLVMHPIYTFGTKEQKEKYLPGLAKGALVGCFGLTEPNHGSDPGGMETRARKQPDGGYVLSGSKNWITNSPIADVFVVWAKDDEGVIRGFVLERGMKGLTAPKIEGKFSLRASTTGMIVMDDVEVPASNLLPLARGLGGPFSCLNSARYGISWGSMGAAAFCMSTALAYVLERSQFGAPLASNQLIQRKLADMDTDIALALQGSLRVGRLLDEGRAVPEMVSLVKRNNCGKALNIARSARDMLGGNGISDEYHVIRHMMNLEAVNTYEGTHDVHALILGRAITGIPAFVPRNSYPKAQKRES 442          
BLAST of EWM23946.1 vs. NCBI_GenBank
Match: gi|695387523|ref|XP_009518910.1| (acyl-CoA dehydrogenase [Phytophthora sojae] >gi|348683807|gb|EGZ23622.1| acyl-CoA dehydrogenase [Phytophthora sojae])

HSP 1 Score: 611.298 bits (1575), Expect = 0.000e+0
Identity = 287/389 (73.78%), Postives = 335/389 (86.12%), Query Frame = 0
Query:   43 YDWQDPLLLRAQLTEEEGMIQDMARAYCQQSLQPRILHANRHEEFDRKIMTEMGELGLLGPTIRGYGCSGVGYVAYGLIAREVEAVDSAYRSAMSVQSSLVMHPIYTFGTKEQKEKYLPGLAKGALVGCFGLTEPNHGSDPGGMETRARKQPDGGYVLSGSKNWITNSPIADVFVVWAKDDEGVIRGFVLERGMKGLTAPKIEGKFSLRASTTGMIVMDDVEVPASNLLPLARGLGGPFSCLNSARYGISWGSMGAAAFCMSTALAYVLERSQFGAPLASNQLIQRKLADMDTDIALALQGSLRVGRLLDEGRAVPEMVSLVKRNNCGKALNIARSARDMLGGNGISDEYHVIRHMMNLEAVNTYEGTHDVHALILGRAITGIPAFVPR 431
            ++W+DPL+L  QLT+EE MIQ  A  YCQ  L PRI+ ANR  +FDR IM EMGE+G LGPTI+GYGC+GVGYV+YGLIA  VE VDSAYRSAMSVQSSLVMHPI TFG++EQKEKYLP LA G L+GCFGLTEPNHGSDPG METRAR + D  YVL+GSKNWITN+PIADVF+VWAKDDEG IRGF+LE+   GL+AP IEGK +L AS TGMI ++DVEVP  N+LP  +GL GPF+CLNSARYGISWG++GAA  CM  A  Y L+RSQFGAPLA+NQLIQ+KLADM+T+IA+ LQG L+VGRLLDEG+A  E++S+VKRN+CGKA+ IAR+ARDMLGGNG+SDEYH+IRH++NLEAVNTYEGTHDVHALILGRAITG+PAFVPR
Sbjct:   30 FNWKDPLMLEGQLTDEEAMIQKSANDYCQGKLLPRIVEANRKGKFDRSIMKEMGEMGFLGPTIQGYGCAGVGYVSYGLIANAVERVDSAYRSAMSVQSSLVMHPINTFGSEEQKEKYLPRLATGELIGCFGLTEPNHGSDPGSMETRARLKGDK-YVLNGSKNWITNAPIADVFLVWAKDDEGDIRGFILEKDFPGLSAPYIEGKATLMASATGMIFLEDVEVPKENMLPKVKGLKGPFTCLNSARYGISWGALGAAYSCMDIARQYTLDRSQFGAPLAANQLIQKKLADMNTEIAIGLQGCLQVGRLLDEGKAPVELISMVKRNSCGKAIEIARNARDMLGGNGVSDEYHIIRHVVNLEAVNTYEGTHDVHALILGRAITGLPAFVPR 417          
BLAST of EWM23946.1 vs. NCBI_GenBank
Match: gi|1214713714|gb|OWZ24597.1| (Acyl-CoA dehydrogenase [Phytophthora megakarya])

HSP 1 Score: 610.142 bits (1572), Expect = 0.000e+0
Identity = 287/389 (73.78%), Postives = 335/389 (86.12%), Query Frame = 0
Query:   43 YDWQDPLLLRAQLTEEEGMIQDMARAYCQQSLQPRILHANRHEEFDRKIMTEMGELGLLGPTIRGYGCSGVGYVAYGLIAREVEAVDSAYRSAMSVQSSLVMHPIYTFGTKEQKEKYLPGLAKGALVGCFGLTEPNHGSDPGGMETRARKQPDGGYVLSGSKNWITNSPIADVFVVWAKDDEGVIRGFVLERGMKGLTAPKIEGKFSLRASTTGMIVMDDVEVPASNLLPLARGLGGPFSCLNSARYGISWGSMGAAAFCMSTALAYVLERSQFGAPLASNQLIQRKLADMDTDIALALQGSLRVGRLLDEGRAVPEMVSLVKRNNCGKALNIARSARDMLGGNGISDEYHVIRHMMNLEAVNTYEGTHDVHALILGRAITGIPAFVPR 431
            ++W+DPLLL +QLT+EE MIQ  A  YCQ  L PRI+ ANR  +FDR IM EMGE+G LGPTI+GYGC+GVGYV+YGLIA  VE VDSAYRSAMSVQSSLVMHPI TFG+ EQKEKYLP LA G L+GCFGLTEPNHGSDPG METRA+ + D  YVL+GSKNWITN+PIADVF+VWAKDDEG IRGF+LE+   GL+AP IEGK +L AS TGMI ++DVEVP  N+LP  +GL GPF+CLNSARYGISWG++GAA  CM  A  Y L+R+QFGAPLA+NQLIQ+KLADM+T+IAL LQG L+VGRLLDEG+A  E++S+VKRN+CGKA+ IAR+ARDMLGGNG+SDEYH+IRH++NLEAVNTYEGTHDVHALILGRAITG+PAFVPR
Sbjct:   28 FNWRDPLLLDSQLTDEEQMIQKSANDYCQGKLLPRIVEANRKGKFDRSIMQEMGEMGFLGPTIKGYGCAGVGYVSYGLIANAVERVDSAYRSAMSVQSSLVMHPINTFGSDEQKEKYLPRLATGELIGCFGLTEPNHGSDPGSMETRAKLKGDK-YVLNGSKNWITNAPIADVFLVWAKDDEGDIRGFILEKDFPGLSAPYIEGKATLMASATGMIFLEDVEVPKENMLPKVKGLKGPFTCLNSARYGISWGALGAAYSCMDIARQYTLDRAQFGAPLAANQLIQKKLADMNTEIALGLQGCLQVGRLLDEGKAPVELISMVKRNSCGKAIEIARNARDMLGGNGVSDEYHIIRHVVNLEAVNTYEGTHDVHALILGRAITGLPAFVPR 415          
BLAST of EWM23946.1 vs. NCBI_GenBank
Match: gi|970665316|gb|KUG02007.1| (Acyl-CoA dehydrogenase [Phytophthora nicotianae])

HSP 1 Score: 608.216 bits (1567), Expect = 0.000e+0
Identity = 285/392 (72.70%), Postives = 335/392 (85.46%), Query Frame = 0
Query:   40 KQRYDWQDPLLLRAQLTEEEGMIQDMARAYCQQSLQPRILHANRHEEFDRKIMTEMGELGLLGPTIRGYGCSGVGYVAYGLIAREVEAVDSAYRSAMSVQSSLVMHPIYTFGTKEQKEKYLPGLAKGALVGCFGLTEPNHGSDPGGMETRARKQPDGGYVLSGSKNWITNSPIADVFVVWAKDDEGVIRGFVLERGMKGLTAPKIEGKFSLRASTTGMIVMDDVEVPASNLLPLARGLGGPFSCLNSARYGISWGSMGAAAFCMSTALAYVLERSQFGAPLASNQLIQRKLADMDTDIALALQGSLRVGRLLDEGRAVPEMVSLVKRNNCGKALNIARSARDMLGGNGISDEYHVIRHMMNLEAVNTYEGTHDVHALILGRAITGIPAFVPR 431
            +  ++W+DPL+L  QLT+EE MIQ  A  YCQ  L PRI+ ANR  +FDR IM EMGE+G LGPTI+GYGC+GVGYV+YGLIA  VE VDSAYRSAMSVQSSLVMHPI TFG+ EQKEKYLP LA G L+GCFGLTEPNHGSDPG METRAR + D  Y+L+GSKNWITN+PIADVF+VWAKDDEG IRGF+LE+   GL+AP IEGK +L AS TGMI ++DVEVP  N+LP  +GL GPF+CLNSARYGISWG++GAA  CM  A  Y L+R+QFGAPLA+NQLIQ+KLADM+T+IA+ LQG L+VGRLLDEG+A  E++S+VKRN+CGKA+ IAR+ARDMLGGNG+SDEYH+IRH++NLEAVNTYEGTHDVHALILGRAITG+PAFVPR
Sbjct:   27 RATFNWRDPLMLEGQLTDEEAMIQKSANDYCQGKLLPRIVEANRKGKFDRSIMKEMGEMGFLGPTIQGYGCAGVGYVSYGLIANAVERVDSAYRSAMSVQSSLVMHPINTFGSDEQKEKYLPRLATGELIGCFGLTEPNHGSDPGSMETRARLKGDK-YILNGSKNWITNAPIADVFLVWAKDDEGGIRGFILEKDFPGLSAPYIEGKATLMASATGMIFLEDVEVPKENMLPKVKGLKGPFTCLNSARYGISWGALGAAYACMDIARQYTLDRNQFGAPLAANQLIQKKLADMNTEIAIGLQGCLQVGRLLDEGKAPVELISMVKRNSCGKAIEIARNARDMLGGNGVSDEYHIIRHVVNLEAVNTYEGTHDVHALILGRAITGLPAFVPR 417          
BLAST of EWM23946.1 vs. NCBI_GenBank
Match: gi|570331174|gb|ETO79122.1| (hypothetical protein F444_06129 [Phytophthora parasitica P1976] >gi|570989998|gb|ETP48101.1| hypothetical protein F442_06110 [Phytophthora parasitica P10297])

HSP 1 Score: 608.216 bits (1567), Expect = 0.000e+0
Identity = 285/392 (72.70%), Postives = 335/392 (85.46%), Query Frame = 0
Query:   40 KQRYDWQDPLLLRAQLTEEEGMIQDMARAYCQQSLQPRILHANRHEEFDRKIMTEMGELGLLGPTIRGYGCSGVGYVAYGLIAREVEAVDSAYRSAMSVQSSLVMHPIYTFGTKEQKEKYLPGLAKGALVGCFGLTEPNHGSDPGGMETRARKQPDGGYVLSGSKNWITNSPIADVFVVWAKDDEGVIRGFVLERGMKGLTAPKIEGKFSLRASTTGMIVMDDVEVPASNLLPLARGLGGPFSCLNSARYGISWGSMGAAAFCMSTALAYVLERSQFGAPLASNQLIQRKLADMDTDIALALQGSLRVGRLLDEGRAVPEMVSLVKRNNCGKALNIARSARDMLGGNGISDEYHVIRHMMNLEAVNTYEGTHDVHALILGRAITGIPAFVPR 431
            +  ++W+DPL+L  QLT+EE MIQ  A  YCQ  L PRI+ ANR  +FDR IM EMGE+G LGPTI+GYGC+GVGYV+YGLIA  VE VDSAYRSAMSVQSSLVMHPI TFG+ EQKEKYLP LA G L+GCFGLTEPNHGSDPG METRAR + D  Y+L+GSKNWITN+PIADVF+VWAKDDEG IRGF+LE+   GL+AP IEGK +L AS TGMI ++DVEVP  N+LP  +GL GPF+CLNSARYGISWG++GAA  CM  A  Y L+R+QFGAPLA+NQLIQ+KLADM+T+IA+ LQG L+VGRLLDEG+A  E++S+VKRN+CGKA+ IAR+ARDMLGGNG+SDEYH+IRH++NLEAVNTYEGTHDVHALILGRAITG+PAFVPR
Sbjct:   27 RATFNWRDPLMLEGQLTDEEAMIQKSANDYCQGKLLPRIVEANRKGKFDRSIMKEMGEMGFLGPTIQGYGCAGVGYVSYGLIANAVERVDSAYRSAMSVQSSLVMHPINTFGSDEQKEKYLPRLATGELIGCFGLTEPNHGSDPGSMETRARLKGDK-YILNGSKNWITNAPIADVFLVWAKDDEGDIRGFILEKDFPGLSAPYIEGKAALMASATGMIFLEDVEVPKENMLPKVKGLKGPFTCLNSARYGISWGALGAAYACMDIARQYTLDRNQFGAPLAANQLIQKKLADMNTEIAIGLQGCLQVGRLLDEGKAPVELISMVKRNSCGKAIEIARNARDMLGGNGVSDEYHIIRHVVNLEAVNTYEGTHDVHALILGRAITGLPAFVPR 417          
BLAST of EWM23946.1 vs. NCBI_GenBank
Match: gi|926614575|ref|XP_013772337.1| (PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial-like [Limulus polyphemus])

HSP 1 Score: 607.831 bits (1566), Expect = 0.000e+0
Identity = 285/391 (72.89%), Postives = 329/391 (84.14%), Query Frame = 0
Query:   40 KQRYDWQDPLLLRAQLTEEEGMIQDMARAYCQQSLQPRILHANRHEEFDRKIMTEMGELGLLGPTIRGYGCSGVGYVAYGLIAREVEAVDSAYRSAMSVQSSLVMHPIYTFGTKEQKEKYLPGLAKGALVGCFGLTEPNHGSDPGGMETRARKQP-DGGYVLSGSKNWITNSPIADVFVVWAKDDEGVIRGFVLERGMKGLTAPKIEGKFSLRASTTGMIVMDDVEVPASNLLPLARGLGGPFSCLNSARYGISWGSMGAAAFCMSTALAYVLERSQFGAPLASNQLIQRKLADMDTDIALALQGSLRVGRLLDEGRAVPEMVSLVKRNNCGKALNIARSARDMLGGNGISDEYHVIRHMMNLEAVNTYEGTHDVHALILGRAITGIPAFV 429
            K  +DWQD   L +QLTEEE +I+D  R YCQ+ L PRIL ANR E F R+I+ EMG LG+LGPTI GYGC+GV YVAYGLIARE E VDS+YRSAMSVQSSLVMHPIY +GT+EQ+EKYLP LA+G  +GCFGLTEPNHGSDPG MET+A+    D  YVL+GSK WITNSPIADVF+VWAK D+ +IRGF+LE+GM+GLTAPKIEGKFSLRAS TGMI+M+DV V  +NLL    GL GPF CLN+ARYGISWG++GAA FC+ TA  Y L+R QFG PLA NQLIQ+KL+DM T+I++ LQ  LRVGRL DEGRA PEM+SLVKRN+CGKAL+IAR+ARD+LGGNGISDEYHVIRH+MNLEAVNTYEGTHD+HALILGRAITGI AF 
Sbjct:   87 KANFDWQDAFNLDSQLTEEEQLIRDQFRTYCQEKLMPRILMANRKEIFHREILPEMGTLGVLGPTITGYGCAGVSYVAYGLIARECERVDSSYRSAMSVQSSLVMHPIYAYGTEEQREKYLPKLARGESIGCFGLTEPNHGSDPGSMETKAKYNSRDKVYVLNGSKTWITNSPIADVFIVWAKCDDNIIRGFILEKGMQGLTAPKIEGKFSLRASDTGMIIMEDVVVSEANLLSHVEGLKGPFGCLNNARYGISWGTLGAAEFCLETARQYTLDRKQFGCPLAKNQLIQKKLSDMLTEISVGLQACLRVGRLKDEGRATPEMISLVKRNSCGKALDIARTARDILGGNGISDEYHVIRHVMNLEAVNTYEGTHDIHALILGRAITGIQAFT 477          
BLAST of EWM23946.1 vs. NCBI_GenBank
Match: gi|675165219|ref|XP_008891494.1| (hypothetical protein PPTG_02217 [Phytophthora parasitica INRA-310] >gi|566027487|gb|ETI50398.1| hypothetical protein F443_06071 [Phytophthora parasitica P1569] >gi|567964789|gb|ETK90271.1| hypothetical protein L915_05951 [Phytophthora parasitica] >gi|567993498|gb|ETL43675.1| hypothetical protein L916_05887 [Phytophthora parasitica] >gi|568022787|gb|ETL96851.1| hypothetical protein L917_05776 [Phytophthora parasitica] >gi|568053161|gb|ETM50010.1| hypothetical protein L914_05894 [Phytophthora parasitica] >gi|568107590|gb|ETN22214.1| hypothetical protein PPTG_02217 [Phytophthora parasitica INRA-310] >gi|570954905|gb|ETP20162.1| hypothetical protein F441_06084 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 607.831 bits (1566), Expect = 0.000e+0
Identity = 285/392 (72.70%), Postives = 335/392 (85.46%), Query Frame = 0
Query:   40 KQRYDWQDPLLLRAQLTEEEGMIQDMARAYCQQSLQPRILHANRHEEFDRKIMTEMGELGLLGPTIRGYGCSGVGYVAYGLIAREVEAVDSAYRSAMSVQSSLVMHPIYTFGTKEQKEKYLPGLAKGALVGCFGLTEPNHGSDPGGMETRARKQPDGGYVLSGSKNWITNSPIADVFVVWAKDDEGVIRGFVLERGMKGLTAPKIEGKFSLRASTTGMIVMDDVEVPASNLLPLARGLGGPFSCLNSARYGISWGSMGAAAFCMSTALAYVLERSQFGAPLASNQLIQRKLADMDTDIALALQGSLRVGRLLDEGRAVPEMVSLVKRNNCGKALNIARSARDMLGGNGISDEYHVIRHMMNLEAVNTYEGTHDVHALILGRAITGIPAFVPR 431
            +  ++W+DPL+L  QLT+EE MIQ  A  YCQ  L PRI+ ANR  +FDR IM EMGE+G LGPTI+GYGC+GVGYV+YGLIA  VE VDSAYRSAMSVQSSLVMHPI TFG+ EQKEKYLP LA G L+GCFGLTEPNHGSDPG METRAR + D  Y+L+GSKNWITN+PIADVF+VWAKDDEG IRGF+LE+   GL+AP IEGK +L AS TGMI ++DVEVP  N+LP  +GL GPF+CLNSARYGISWG++GAA  CM  A  Y L+R+QFGAPLA+NQLIQ+KLADM+T+IA+ LQG L+VGRLLDEG+A  E++S+VKRN+CGKA+ IAR+ARDMLGGNG+SDEYH+IRH++NLEAVNTYEGTHDVHALILGRAITG+PAFVPR
Sbjct:   27 RATFNWRDPLMLEGQLTDEEAMIQKSANDYCQGKLLPRIVEANRKGKFDRSIMKEMGEMGFLGPTIQGYGCAGVGYVSYGLIANAVERVDSAYRSAMSVQSSLVMHPINTFGSDEQKEKYLPRLATGELIGCFGLTEPNHGSDPGSMETRARLKGDK-YILNGSKNWITNAPIADVFLVWAKDDEGDIRGFILEKDFPGLSAPYIEGKATLMASATGMIFLEDVEVPKENMLPKVKGLKGPFTCLNSARYGISWGALGAAYACMDIARQYTLDRNQFGAPLAANQLIQKKLADMNTEIAIGLQGCLQVGRLLDEGKAPVELISMVKRNSCGKAIEIARNARDMLGGNGVSDEYHIIRHVVNLEAVNTYEGTHDVHALILGRAITGLPAFVPR 417          
BLAST of EWM23946.1 vs. NCBI_GenBank
Match: gi|656110701|ref|WP_029134232.1| (acyl-CoA dehydrogenase [Sedimenticola selenatireducens])

HSP 1 Score: 607.06 bits (1564), Expect = 0.000e+0
Identity = 291/388 (75.00%), Postives = 326/388 (84.02%), Query Frame = 0
Query:   43 YDWQDPLLLRAQLTEEEGMIQDMARAYCQQSLQPRILHANRHEEFDRKIMTEMGELGLLGPTIRGYGCSGVGYVAYGLIAREVEAVDSAYRSAMSVQSSLVMHPIYTFGTKEQKEKYLPGLAKGALVGCFGLTEPNHGSDPGGMETRARKQPDGGYVLSGSKNWITNSPIADVFVVWAKDDEGVIRGFVLERGMKGLTAPKIEGKFSLRASTTGMIVMDDVEVPASNLLPLARGLGGPFSCLNSARYGISWGSMGAAAFCMSTALAYVLERSQFGAPLASNQLIQRKLADMDTDIALALQGSLRVGRLLDEGRAVPEMVSLVKRNNCGKALNIARSARDMLGGNGISDEYHVIRHMMNLEAVNTYEGTHDVHALILGRAITGIPAFVP 430
            + W+DPLLL  QLTEEE M++D A+ YCQ+ L PR+L ANRHE FDR+IM EMGELGLLG TI GY C+G+ YV+YGLIAREVE VDS YRSAMSVQSSLVMHPIY +GT+EQ+EKYLP LA G LVGCFGLTEP+HGSDP GM+TRAR   DGGY LSGSK WITNSPIADVF+VWAKDDEGVIRGF+LE+GMKGL+APKIEGKFSLRAS TG IVMD+V VPA NLLP  +GL GPF CLN ARYGI+WG +GAA  C   AL Y L+R QFG PLA+NQLIQ KLA+M T+I L LQG L++GRL D G+A PE +SL+KRNN GKAL+IAR ARDM GGNGISDE+HVIRH MNLEAVNTYEGTHDVHALILGRA TGI AF P
Sbjct:   11 FKWEDPLLLDQQLTEEERMVRDTAQKYCQEQLMPRVLEANRHEHFDREIMNEMGELGLLGVTIDGYDCAGLNYVSYGLIAREVERVDSGYRSAMSVQSSLVMHPIYAYGTEEQREKYLPKLATGELVGCFGLTEPDHGSDPAGMKTRART-VDGGYSLSGSKMWITNSPIADVFIVWAKDDEGVIRGFILEKGMKGLSAPKIEGKFSLRASITGEIVMDEVFVPAENLLPNVKGLAGPFGCLNRARYGIAWGVLGAAEDCWHRALTYTLDRKQFGRPLAANQLIQLKLANMQTEITLGLQGCLQLGRLFDAGQAAPEAISLMKRNNAGKALDIARIARDMHGGNGISDEFHVIRHAMNLEAVNTYEGTHDVHALILGRAQTGIQAFAP 397          
BLAST of EWM23946.1 vs. NCBI_GenBank
Match: gi|766667890|ref|WP_044827727.1| (acyl-CoA dehydrogenase [Thalassospira sp. HJ] >gi|765370762|gb|KJE35700.1| acyl-CoA dehydrogenase [Thalassospira sp. HJ])

HSP 1 Score: 605.905 bits (1561), Expect = 0.000e+0
Identity = 292/387 (75.45%), Postives = 332/387 (85.79%), Query Frame = 0
Query:   43 YDWQDPLLLRAQLTEEEGMIQDMARAYCQQSLQPRILHANRHEEFDRKIMTEMGELGLLGPTI-RGYGCSGVGYVAYGLIAREVEAVDSAYRSAMSVQSSLVMHPIYTFGTKEQKEKYLPGLAKGALVGCFGLTEPNHGSDPGGMETRARKQPDGGYVLSGSKNWITNSPIADVFVVWAKDDEGVIRGFVLERGMKGLTAPKIEGKFSLRASTTGMIVMDDVEVPASNLLPLARGLGGPFSCLNSARYGISWGSMGAAAFCMSTALAYVLERSQFGAPLASNQLIQRKLADMDTDIALALQGSLRVGRLLDEGRAVPEMVSLVKRNNCGKALNIARSARDMLGGNGISDEYHVIRHMMNLEAVNTYEGTHDVHALILGRAITGIPAF 428
            + W+DPLLL  QL+E+E MI+D ARAYCQ++LQ R+L ANRHE F R+IM+EMGELGLLGPTI   YG  GV +VAYGL+AREVE VDS YRSAMSVQSSLVMHPIY +G++EQ++KYLP LA G  VGCFGLTEP+HGSDPGGM+TRARK  DGG+ LSG+K WITNSPIADVFVVWAKDDEGVIRGF+LE+GMKGL+APKIEGKFSLRAS TG IVMD+V VP  NLLP A+GLGGPF CLN ARYGI+WG+MGAA FC   A  Y L+R QFG PLA+NQLIQ KLA+M T+I L LQG+L+VGRLLDEG+  PE +SL+KRNNCGKAL+IAR ARDM GGNGISDE+HVIRH MNLEAVNTYEGTHDVHALILGRA TG+ AF
Sbjct:    7 FHWEDPLLLEEQLSEDERMIRDAARAYCQENLQTRVLEANRHEVFHREIMSEMGELGLLGPTIPEEYGGPGVNHVAYGLVAREVERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRKKYLPKLATGEWVGCFGLTEPDHGSDPGGMKTRARK-ADGGFNLSGAKMWITNSPIADVFVVWAKDDEGVIRGFILEKGMKGLSAPKIEGKFSLRASITGEIVMDNVFVPEENLLPNAKGLGGPFGCLNKARYGIAWGAMGAAEFCWHAARQYTLDRKQFGRPLAANQLIQLKLANMQTEITLGLQGALQVGRLLDEGKGAPEAISLMKRNNCGKALDIARVARDMHGGNGISDEFHVIRHAMNLEAVNTYEGTHDVHALILGRAQTGLQAF 392          
BLAST of EWM23946.1 vs. NCBI_GenBank
Match: gi|301771231|ref|XP_002921054.1| (PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial [Ailuropoda melanoleuca] >gi|1126268739|ref|XP_019657115.1| PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial [Ailuropoda melanoleuca])

HSP 1 Score: 605.905 bits (1561), Expect = 0.000e+0
Identity = 292/433 (67.44%), Postives = 347/433 (80.14%), Query Frame = 0
Query:    2 LRRILPVCLRPLPG--FTRAFGTVPVDLPEHPPTVNASTDKQR--YDWQDPLLLRAQLTEEEGMIQDMARAYCQQSLQPRILHANRHEEFDRKIMTEMGELGLLGPTIRGYGCSGVGYVAYGLIAREVEAVDSAYRSAMSVQSSLVMHPIYTFGTKEQKEKYLPGLAKGALVGCFGLTEPNHGSDPGGMETRARKQPDG-GYVLSGSKNWITNSPIADVFVVWAKDDEGVIRGFVLERGMKGLTAPKIEGKFSLRASTTGMIVMDDVEVPASNLLPLARGLGGPFSCLNSARYGISWGSMGAAAFCMSTALAYVLERSQFGAPLASNQLIQRKLADMDTDIALALQGSLRVGRLLDEGRAVPEMVSLVKRNNCGKALNIARSARDMLGGNGISDEYHVIRHMMNLEAVNTYEGTHDVHALILGRAITGIPAFV 429
            LRR+    L   PG  F R +G+      +   T N +T   R  +DW+DPL+L  QLT +E +I+D  R YCQ+ L PRIL ANR+E F R+I++EMGELG+LGPTI+GYGC+GV  VAYGL+ARE+E VDS YRSAMSVQSSLVMHPIYT+G+KEQ++KYLP LAKG L+GCFGLTEPNHGSDPG METRAR  P    Y L+G+K WITNSP+AD+FVVWA+ ++  IRGF+LE+GM+GL+APKIEGKFSLRAS+TGMIVMD VEVP  N+LP   GL GPF CLN+AR+GI+WG +GAA FC+ TA  Y L+R QFGAPLA NQLIQ+KLADM T+I L L   L++GRL D+ +A PEMVSL+KRNNCGKAL+IAR ARD+LGGNGISDEYHVIRH MNLEAVNTYEGTHD+HALILGRAITGI AF 
Sbjct:    3 LRRVSERLLSRGPGLNFLRGWGSAAAQTEKGGKTQNRATKSSRPEFDWRDPLVLEEQLTADEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEMGELGVLGPTIKGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYTYGSKEQQQKYLPRLAKGELLGCFGLTEPNHGSDPGSMETRARHNPSNRSYTLNGTKTWITNSPVADLFVVWARCEDSCIRGFLLEKGMRGLSAPKIEGKFSLRASSTGMIVMDSVEVPEENVLPDVSGLAGPFGCLNNARFGIAWGVLGAAEFCLHTARQYTLDRIQFGAPLARNQLIQKKLADMLTEITLGLHTCLQLGRLKDQDKATPEMVSLLKRNNCGKALDIARQARDILGGNGISDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAITGIQAFT 435          
The following BLAST results are available for this feature:
BLAST of EWM23946.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105232|gb|EWM23946.1|0.000e+0100.00glutaryl- mitochondrial precursor [Nannochloropsis... [more]
gi|695387523|ref|XP_009518910.1|0.000e+073.78acyl-CoA dehydrogenase [Phytophthora sojae] >gi|34... [more]
gi|1214713714|gb|OWZ24597.1|0.000e+073.78Acyl-CoA dehydrogenase [Phytophthora megakarya][more]
gi|970665316|gb|KUG02007.1|0.000e+072.70Acyl-CoA dehydrogenase [Phytophthora nicotianae][more]
gi|570331174|gb|ETO79122.1|0.000e+072.70hypothetical protein F444_06129 [Phytophthora para... [more]
gi|926614575|ref|XP_013772337.1|0.000e+072.89PREDICTED: glutaryl-CoA dehydrogenase, mitochondri... [more]
gi|675165219|ref|XP_008891494.1|0.000e+072.70hypothetical protein PPTG_02217 [Phytophthora para... [more]
gi|656110701|ref|WP_029134232.1|0.000e+075.00acyl-CoA dehydrogenase [Sedimenticola selenatiredu... [more]
gi|766667890|ref|WP_044827727.1|0.000e+075.45acyl-CoA dehydrogenase [Thalassospira sp. HJ] >gi|... [more]
gi|301771231|ref|XP_002921054.1|0.000e+067.44PREDICTED: glutaryl-CoA dehydrogenase, mitochondri... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6708rna6708Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications