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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100027g7.126.mrna |
| Orig protein id | gnl|cribi|Naga_100027g7.126 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:299713..300655 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6701 ID=rna6701|Name=rna6701|organism=Nannochloropsis gaditana|type=mRNA|length=4872bp
ATGGCGGCGGAGTATAAAGAAAATCTCACTGACTTAGGCCTGGGCACACT
TTGCATTGCATTGACCCTCGGTATTATTTCGCGGTCCTGGCTTCAGAAAA
TCTTGCCTATTCCTTACTCGGTGGTTCTCCTCCTCTTCGGCTTGGCCATC
GGCACTTTCCTGGTAACAACCTACCCGAACTCGCACGACATTGTCAGCAA
CAGTGTTCACACATGGGTAGACATATCTCCCGAGGCCGTCATCTTCTGCA
TATTGCCCATCCTCATCTTTGAGGCCAGTTTCTCAGCCAACTTGTTTTTG
TTCTACAAAAGCCTTCCTGCCGTCTTTTGCATGGCCATTCCTCTCGTGGT
CTTTTCAAGCGTTGTGATCGGCTTGGTGGGCTATTTCCGCTTCCCTTACG
GATGGGATTTCCCGACGGCCCTGCTCCTCGGCTCCATCCTCAGCCCGACG
GACACCGTGGCACCCATGGCCATCCTGAAAGAGCTCGGGGCGCCCGAATC
CCTGCAGATCATCGTCGAGGGCGAGTCGCTGTTGAACGACGGGTCCGCCC
TAGTCCTCTTCACTCTCGCTCGTGGCATGGTGCTCTCGGGCGAGGTCCCC
ACTGCCCTGGAGGGCTTCGTCTCCCTCGTCCGCCTCTCCCTCGGCGGGCC
AATCGTCGGCCTCTGCGTCGGGGCCCTCGCCTCCTACATCCTCGGCTTCA
TCCTCAACGATCCCCTGAGCGAGATCACCACCACTGTGGTGGTGGGCTAC
GGGAGCTTCATCCTGGCGGAGAGCACGGGTCTCCACGCCTCCGGGGTCTT
GGCCATGGTGGTGGCGGGGCTGTACATGTCTTTCTACGGGCGGGGCCGTG
TCTCGGCCCGTGTGCGCGCGGAACTGAACTCATTCTGGGCGATTGCCGGC
TTCATTACCAACACCCTCATCTTCGTGGTGGCGGGCCTGCAAATGGCGAT
GCGTGGTCTGCGGTCCACCTACATTAGCTCCACCGACTGGGGCATCATGG
TGGGGCTTTACGTGCTCATGAACACCCTGCGTCTCGCGGGCGTCATCATT
TTCTTCCCCATCCTCCGGCGCGGGTCTTACGGCATCGACACGCGCCAAGG
CGTGGTTCTCGCCTACTCGGGGCTGAGGGGGGCCGTCGGACTGACCTTGG
CCATTGCCATCCACCAGGACAGCCAGATCCCCATCGCTACCCGCGATCGG
ATACTCTTCCACGTTGCGGGAGCGAGCTTGCTGAGTCTGCTCGTGAACGG
AACGACCCTGAAGCCCTTGATCACCGCCCTAGGCCTGGACAGGGAGAGCC
CCGCGGAGGTGGAGGTCTACCAGCGCACGTCCATCGCTTTGGAGCAGCGC
ATCGAGGACCGAGTCATGCTTTTGAAGCGGGAGCCTTTCCTGGGCGACGC
GGACTGGGGCGTGGTGTGGCGGTACCTGCCCGTCTTGACCAAGGATGTCT
ACTGGCACCGGTTTCGACAGGGGCACACGCTCTTGACGGACTGGGAGGCC
GAGTACATGTCCTTGCGGAGCCGCGGTGACGAGGAGGAGGAGGAGGAGAC
CGCGCTAAAGGGCCAACAGGCGCGGCGCCAACCGCTTCGACGCCGACGGA
AAGCGCAGCTCAAAGCCGCTTCCGTGGCGGCCGCCCAGGCGAGTGCCTCC
AACCCGCTCTCGGCGCCCAGCAAGCTCAAGGGCGTGCCCAACCGCTTGCG
TCGCACCTGGCGGCATTACGCCCAGCTTTACAACGACCTGGACGGGCCAG
AGAGGGAGGGCTTCCGACAGCTTCGGGCGGGACTCCTGGACGCCTGGCGG
AACCACTTGATGGTGGAAGGGCACATGAAGCACGAGCAGGAGGAGCTTGC
CAGCGACCAATACCTGGCTGCTGCCGCTGCGGGCACCTCGGACAAGGCCA
ACGAGGGGCCTGCTTCTCAGCTTTCCTCGGTCATGTCTTCTGCATCCTCC
GTGGAGCCCCCGCTAGCTCGGCTCGCCTACGCGTCCTCCTCCTCGTCCCT
GCCCGTCGGCCAAGAAGTGTCGGCGCTCAGCTTTGAAGGCGTGAGCAGCG
GGAGCAGCAAGCCGATCAGCCGGCGTCGAATGTCGAACGTGACCGTCCTG
TGGGAGCCAGAAATCGAGGGTCTCAAGCTCGAGAATTCGCGTGGCAGTGT
GCCTTGTCTGGCGGAGGGCAGTGCAGAGAGTTCCAACGGCGTTGGGACTC
CTCAGGAGGGCGTCCCGGCTAGTGAGAACGGTTTCCATCCCGAGGGATTG
GCCAGTCACGACGGCACTGCAAAGGGTGCAGGCGTGGGTGAAGCCAGCGC
CCCCACCGTGCATCTCGGCGCGCCCCCGATCGCGAAGTCTTCCACGTCGG
ATACCGTCAAAGTCCTCGGTCCGCCCCTGCAGGAGGACGTGTTGAAACGA
GCGCGCGTGCAGGTCCTGACGGTCCTCAAGCACTTGTACGGGGCCAACTT
CCACTCAGGCCTGCTCAGCAACGAGGGGTACCAGGCGCTGGAAAAAAACC
TCTACAAACTCATCCTGGACCCGGGCTGCGAATTAAACGAATGGCGGACC
CTGGAGCGTGAGATATGGATCCCTCTGAATGCCCTCCGGCTGGCCAAGCG
GCTTTCCCGCTCGGCGATCATCAGGCCCCTCGCCAATTCTTTTCTCTTCT
CTCGCCTCGCCTTCTTGTTCGGGCTGGCCGTGAACTTCATCAAGGCCCAC
AGGTCTCTGGCCGAGGACCTAGGAAAGATTTTGGGGGCGGGACCCACGAC
CACGATCCTGGAGCAGGAGGTCTGGCGGGAAATCGAAGACGCCCAGCGCA
CGATCGAGATGTACTTGCCCATCTACCCCAACACCTTCAACTCGGTCAAA
ACCGAGATCGCTACGAGCGTCGTCCTGCAGCATTTCCGTTCCCTCTTGGA
GGAGTCGCACGAGATGGGCATCCTCCATGAGCGGCGCTACCACAAGGCGG
TCGAAGCGTGCAACGACGCGACAAACGCCTTGTCCGCCCATTCTCACAGT
GAACACGCCCCCTCTTACGCCAGTGTCCTTTCCGCTGTGGGCTTTCTTCG
ATTTCTGCCGTCCCAGCAACTGGAAGAGTTGTTTTTAGAGCCAAAACCTG
GAAAACGCCGGTTGTTTGCCGACGTCTATGTGCGTGCGAATCGAAAGCTT
TTGAAGCGAGGCCTCCAGGGAGAGGGAGGGCTGGGTGGGGGCTGGTATGT
GGTCGTCCGAGGCGTGGTGGCTGTGGGGGACGTCATTTTGCCGCAGGGGT
CGACGTTGGGCTTGGTCGAGTCGCTGCTGGGGGAGGAGGTGGCGGAGGAC
TACGTGACCACCACCTTGACGCACTTGCTCTTCTTCGACCAGGCCGCGAT
ACTGCAAGAGGCAGAGTCCAATTTCTTGCTGCTCAAAAGCTTGTGGTGGT
ACGTGGCTGTGCAGGAGCTTCGCCAGTACGAGTCCTACGAGGACTTGAAT
GTGGGCGAGGTGGGAGAGCTGTTGGCGGATGCGCACTTTGTTCAGGTGGT
GGACGGACAGGACGTGGGAGGGATGGGGGAAGGGGAGGGGAAGACTTGGA
GGACCCGCAATGCTACCAGTCTGCGTCTGCTGAGCTTGTCTTCGATCCGG
CTGCAATTGGAAAACATCAGCACTGTGGCGGGGCAGTCCCTACGCCTCCC
GCACTCGTCGACGGCGGCGCGCAAGCCCTCCCGGCGACACCAGCTCCTCC
GTGTTTGGGGGAGCAAAAAAGACGTCCTGATCCTGAAGGGTGGTATCCGT
GGCCCGAGTCTGGCACCAACGCCGAAAAATTCTTTGTCGGGGAAGCACAG
GAACTCGAATAGCAAGGAAGACTTGCCTTCAGCAGGGAGCGGCATGTCAT
CGGAATCTGCCCTCATTGGCAAGTCATCTGGGAAAAAAGGGGTTGTAGGA
GCGAGCCGCCTCGTCGGCAATTCATTGAAAGTGGACAGCCTTTCTGCTTC
GGCCTCGACCGAGCCGCCAAAGCGCCCGCCCATGTTGCTCAGCGATTTCC
AGGGTGAGGTGGCATTGGAGGTGGGGAGCATATGCTTCGTCATTCAGCGG
GAAGAGGCCTCAGCGACGGCGGCACCCGCGCCTCCAGTTGGCAGGCTCAT
CACGCCGGCACATCCTACCCCCGGGAGTCTTGCGGGTTACCGGGGGAGTA
CTTCACGTCGGGATTCTGCGGGTCTTCAACCGTTGAAGCGAGGCAGTGAG
GTCGTTTCCGGCGTCGACTTGACGCCTCTTGAGCCGGCATACCCACCTGG
TGAACGGCCTCTATCAAGGGAGCGCCCGCGCTGGAAACAAGTAGAAGAGA
TGCCGCTGGGAGGCAGAGCACCATTTGATGTGCCCATCCCTATTTCCAAG
AAGAAGACGCCCTCTTCTCGTAGCTCTCAGCACGTGATCCTCTCGTCCTC
GCATAAGACTCCTCGGTCATCATCAAAATGGGCGCAGACGGTGACTTTGC
AAGATTTTTTGGACTCAGCATGCGGAGAGATAGACGTGGAGGCAGCGAAA
AAGGCGCTGGCCAAAGGCGAAACACTCGCAGGCTTTCTGTCCCGCCGTGA
AACCATGGACAAATCAGCGGAGGGGGGTGGTGGTGGCTCAGTGGGAACGC
CACCCAGGTCCAAGCAACGTGTCTCTTCTACCGCCTCCAGTCCTCTGACC
ACTCTTTTCTCCCGAGCTGACTTTCAGCCTGCCCGTCGCTCGCAGACCGA
AGAAGTGTTATTGGAAGGGGACGATGTCGCTCAGAGCAGGCAAGCGCGGC
ACAGTGGGCAAGCAAACGGTAGGAAACCGACAGCATTGGAGCTTATGTTC
ATCGATAGATCTGAGTCTGGAGGCAAGGGTCGAAAGGAAACGCAAGTCGC
GCGCGGTGATGACCAGGTTTAA back to topprotein sequence of rna6701 >rna6701-protein ID=rna6701-protein|Name=rna6701|organism=Nannochloropsis gaditana|type=polypeptide|length=189bp
MNSHMCVLDFDVLILDRSPTRRFTSTSSVLRRIRSSSQVTGAVRKPLFQH
LRQHRSLTSSVETIPYCDMGAAILVANETTVLDTRPATFSERLRLSLLHA
RGPLEYDRVFIRLIINDACALRCIGTEQGDISTNTFCLLEVKTRLQQATI
GQLAHRYFGVMRPVHKRSPLLSVSIISVILLPLNLILIV back to topmRNA from alignment at CM002469.1:299713..300655+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6701 ID=rna6701|Name=rna6701|organism=Nannochloropsis gaditana|type=mRNA|length=943bp|location=Sequence derived from alignment at CM002469.1:299713..300655+ (Nannochloropsis gaditana)
ATGAACAGTCACATGTGTGTTCTCGATTTTGATGTGCTGATTCTGGATAG
AAGTCCCACGAGGAGATGTGTCGCCCTCTAGCGGTCGGTGAACAAGAAAC
TTCTATGATACCCGGATAACCATACTAAAGTTCGCAAACATGTTGCATTA
CGTGCCTCATTGGGGCTCTAAGAATCTTTAAAAATGGAAAATATATAGAA
ATCGACCACAAATGTACGTATTTGTACTCAGAACGCCTTATCAGACGCAA
AACTTGCCGGCAGGCACTTCGGCCGGCCACACCGGCTCCCCGTGTCGATC
AGTCACTTCAACTTCATCTGTCCTGCGACGGATCCGTTCCTCCTCACAAG
TAACCGGAGCTGTCAGAAAACCCCTTTTCCAACACTTGCGCCAGCATAGA
AGCCTCACATCCTCTGTTGAAACGATACCTTATTGTGACATGGGGGCGGC
AATTCGTCGGTCTCAAGCGGCATCAATAGATAAATGTTCAAGCTGACAGT
CGTCGCCAACGAGACCACTGTCCTTGACACTAGGCCCGCGACATTTTCAG
AGCGACTTAGGCTGTCTCTTCTACATGCGCGGGGTCCTCTCGAATATGAC
CGTGTGTGACGGATCTTATTCTTGAAAGAGACACTGTTCATTTGTCATCT
CAGCTTTATAAGGCTCATAATAAATGACGCCTGTGCTTTGAGGTGTATCG
GAACAGAACAGGGCGATATCTCGACAAATACCTTCTGCTTACTTGAAGTC
AAAACTGTATAGTCCAGCCGCGCAATGTATTGATGTTATGCGTGTGCTTT
AGCGTCTGCAACAAGCCACGATCGGGCAATTAGCACATAGATACTTTGGT
GTCATGCGACCCGTACATAAAAGATCTCCACTTTTATCTGTTTCCATTAT
ATCTGTCATACTTCTACCTCTCAATTTGATATTGATTGTCTGA back to topCoding sequence (CDS) from alignment at CM002469.1:299713..300655+ >rna6701 ID=rna6701|Name=rna6701|organism=Nannochloropsis gaditana|type=CDS|length=2850bp|location=Sequence derived from alignment at CM002469.1:299713..300655+ (Nannochloropsis gaditana)
ATGAACAGTCACATGTGTGTTCTCGATTTTGATGTGCTGATTCTGGATAG
AAGTCCCACGAGGAGATTCACTTCAACTTCATCTGTCCTGCGACGGATCC
GTTCCTCCTCACAAGTAACCGGAGCTGTCAGAAAACCCCTTTTCCAACAC
TTGCGCCAGCATAGAAGCCTCACATCCTCTGTTGAAACGATACCTTATTG
TGACATGGGGGCGGCAATTCTCGTCGCCAACGAGACCACTGTCCTTGACA
CTAGGCCCGCGACATTTTCAGAGCGACTTAGGCTGTCTCTTCTACATGCG
CGGGGTCCTCTCGAATATGACCGTGTCTTTATAAGGCTCATAATAAATGA
CGCCTGTGCTTTGAGGTGTATCGGAACAGAACAGGGCGATATCTCGACAA
ATACCTTCTGCTTACTTGAAGTCAAAACTCGTCTGCAACAAGCCACGATC
GGGCAATTAGCACATAGATACTTTGGTGTCATGCGACCCGTACATAAAAG
ATCTCCACTTTTATCTGTTTCCATTATATCTGTCATACTTCTACCTCTCA
ATTTGATATTGATTGTCTGAATGAACAGTCACATGTGTGTTCTCGATTTT
GATGTGCTGATTCTGGATAGAAGTCCCACGAGGAGATTCACTTCAACTTC
ATCTGTCCTGCGACGGATCCGTTCCTCCTCACAAGTAACCGGAGCTGTCA
GAAAACCCCTTTTCCAACACTTGCGCCAGCATAGAAGCCTCACATCCTCT
GTTGAAACGATACCTTATTGTGACATGGGGGCGGCAATTCTCGTCGCCAA
CGAGACCACTGTCCTTGACACTAGGCCCGCGACATTTTCAGAGCGACTTA
GGCTGTCTCTTCTACATGCGCGGGGTCCTCTCGAATATGACCGTGTCTTT
ATAAGGCTCATAATAAATGACGCCTGTGCTTTGAGGTGTATCGGAACAGA
ACAGGGCGATATCTCGACAAATACCTTCTGCTTACTTGAAGTCAAAACTC
GTCTGCAACAAGCCACGATCGGGCAATTAGCACATAGATACTTTGGTGTC
ATGCGACCCGTACATAAAAGATCTCCACTTTTATCTGTTTCCATTATATC
TGTCATACTTCTACCTCTCAATTTGATATTGATTGTCTGAATGAACAGTC
ACATGTGTGTTCTCGATTTTGATGTGCTGATTCTGGATAGAAGTCCCACG
AGGAGATTCACTTCAACTTCATCTGTCCTGCGACGGATCCGTTCCTCCTC
ACAAGTAACCGGAGCTGTCAGAAAACCCCTTTTCCAACACTTGCGCCAGC
ATAGAAGCCTCACATCCTCTGTTGAAACGATACCTTATTGTGACATGGGG
GCGGCAATTCTCGTCGCCAACGAGACCACTGTCCTTGACACTAGGCCCGC
GACATTTTCAGAGCGACTTAGGCTGTCTCTTCTACATGCGCGGGGTCCTC
TCGAATATGACCGTGTCTTTATAAGGCTCATAATAAATGACGCCTGTGCT
TTGAGGTGTATCGGAACAGAACAGGGCGATATCTCGACAAATACCTTCTG
CTTACTTGAAGTCAAAACTCGTCTGCAACAAGCCACGATCGGGCAATTAG
CACATAGATACTTTGGTGTCATGCGACCCGTACATAAAAGATCTCCACTT
TTATCTGTTTCCATTATATCTGTCATACTTCTACCTCTCAATTTGATATT
GATTGTCTGAATGAACAGTCACATGTGTGTTCTCGATTTTGATGTGCTGA
TTCTGGATAGAAGTCCCACGAGGAGATTCACTTCAACTTCATCTGTCCTG
CGACGGATCCGTTCCTCCTCACAAGTAACCGGAGCTGTCAGAAAACCCCT
TTTCCAACACTTGCGCCAGCATAGAAGCCTCACATCCTCTGTTGAAACGA
TACCTTATTGTGACATGGGGGCGGCAATTCTCGTCGCCAACGAGACCACT
GTCCTTGACACTAGGCCCGCGACATTTTCAGAGCGACTTAGGCTGTCTCT
TCTACATGCGCGGGGTCCTCTCGAATATGACCGTGTCTTTATAAGGCTCA
TAATAAATGACGCCTGTGCTTTGAGGTGTATCGGAACAGAACAGGGCGAT
ATCTCGACAAATACCTTCTGCTTACTTGAAGTCAAAACTCGTCTGCAACA
AGCCACGATCGGGCAATTAGCACATAGATACTTTGGTGTCATGCGACCCG
TACATAAAAGATCTCCACTTTTATCTGTTTCCATTATATCTGTCATACTT
CTACCTCTCAATTTGATATTGATTGTCTGAATGAACAGTCACATGTGTGT
TCTCGATTTTGATGTGCTGATTCTGGATAGAAGTCCCACGAGGAGATTCA
CTTCAACTTCATCTGTCCTGCGACGGATCCGTTCCTCCTCACAAGTAACC
GGAGCTGTCAGAAAACCCCTTTTCCAACACTTGCGCCAGCATAGAAGCCT
CACATCCTCTGTTGAAACGATACCTTATTGTGACATGGGGGCGGCAATTC
TCGTCGCCAACGAGACCACTGTCCTTGACACTAGGCCCGCGACATTTTCA
GAGCGACTTAGGCTGTCTCTTCTACATGCGCGGGGTCCTCTCGAATATGA
CCGTGTCTTTATAAGGCTCATAATAAATGACGCCTGTGCTTTGAGGTGTA
TCGGAACAGAACAGGGCGATATCTCGACAAATACCTTCTGCTTACTTGAA
GTCAAAACTCGTCTGCAACAAGCCACGATCGGGCAATTAGCACATAGATA
CTTTGGTGTCATGCGACCCGTACATAAAAGATCTCCACTTTTATCTGTTT
CCATTATATCTGTCATACTTCTACCTCTCAATTTGATATTGATTGTCTGA back to top
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