EWM23948.1, cds6685 (CDS) Nannochloropsis gaditana

Overview
NameEWM23948.1
Unique Namecds6685
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:299713..299779 +
Alignment locationCM002469.1:300015..300167 +
Alignment locationCM002469.1:300212..300317 +
Alignment locationCM002469.1:300366..300468 +
Alignment locationCM002469.1:300515..300655 +

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Properties
Property NameValue
Protein idEWM23948.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100027g7.126.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:299713..299779 +
CM002469.1supercontigCM002469.1:300015..300167 +
CM002469.1supercontigCM002469.1:300212..300317 +
CM002469.1supercontigCM002469.1:300366..300468 +
CM002469.1supercontigCM002469.1:300515..300655 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM23948.1 vs. NCBI_GenBank
Match: gi|585105234|gb|EWM23948.1| (hypothetical protein Naga_100027g7 [Nannochloropsis gaditana])

HSP 1 Score: 380.178 bits (975), Expect = 2.096e-133
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0 
Query:    1 MNSHMCVLDFDVLILDRSPTRRFTSTSSVLRRIRSSSQVTGAVRKPLFQHLRQHRSLTSSVETIPYCDMGAAILVANETTVLDTRPATFSERLRLSLLHARGPLEYDRVFIRLIINDACALRCIGTEQGDISTNTFCLLEVKTRLQQATIGQLAHRYFGVMRPVHKRSPLLSVSIISVILLPLNLILIV 189
            MNSHMCVLDFDVLILDRSPTRRFTSTSSVLRRIRSSSQVTGAVRKPLFQHLRQHRSLTSSVETIPYCDMGAAILVANETTVLDTRPATFSERLRLSLLHARGPLEYDRVFIRLIINDACALRCIGTEQGDISTNTFCLLEVKTRLQQATIGQLAHRYFGVMRPVHKRSPLLSVSIISVILLPLNLILIV
Sbjct:    1 MNSHMCVLDFDVLILDRSPTRRFTSTSSVLRRIRSSSQVTGAVRKPLFQHLRQHRSLTSSVETIPYCDMGAAILVANETTVLDTRPATFSERLRLSLLHARGPLEYDRVFIRLIINDACALRCIGTEQGDISTNTFCLLEVKTRLQQATIGQLAHRYFGVMRPVHKRSPLLSVSIISVILLPLNLILIV 189
The following BLAST results are available for this feature:
BLAST of EWM23948.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105234|gb|EWM23948.1|2.096e-133100.00hypothetical protein Naga_100027g7 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6701rna6701Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications