|
|
Properties
| Property Name | Value |
|---|
| Product | Complex 1 LYR protein |
| Orig transcript id | gnl|cribi|Naga_100027g1.134.mrna |
| Orig protein id | gnl|cribi|Naga_100027g1.134 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:279814..281245 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6696 ID=rna6696|Name=rna6696|organism=Nannochloropsis gaditana|type=mRNA|length=2124bp
CAAATACTGCCCATGTCCTGACCGGGGGGCTATGCCTGGGTCGCCCGCCG
TGTTGTTGTGCGAGGTGTGATGGGGGGCCGTGATGACGTTCTTCGAATCA
ACTTGTTGCATCACAATTTACCATTTCTCCACCGTGAACATTTCCCTTGA
TTTGTGATACAGGCCTTGGAAGCGTCGGAATGAGAAGGTACGGGGACAGC
ACGCGCAACGTGGGTGTAGGGAAGGAAGAGGAAAGAGGTAGAGAGAGAAG
TAAGGAGCTCGAGCATCAGGATGGGTCGAGCCATCCCCTGGCCTTAACCT
CCACCAATAGTACGAGTACACCCACAAGCAGTAGCAGCAACGGTAAGGGA
AATAACAATGCCCATGCTACGAAGGGGCCGCAGAGCTCAGGAGGAGGGAA
GAACGAAGAAGCACGCCTCAGCAGAAATGACGGTGGCGAAAGCTGCAGTA
GTGGGAGCTGCAGCACAGCAGCAACAGGGGAAGCAACCACACTTTCTCTC
CCCACAGTTGTGAGTGGTAGTGTGCCATTGCCAGCAGGAGGACGGACGTG
TTCAGGTCAAATTTCTCCTGGCACTAGCTGCGTGAAGGAGGGGCGCAGCG
GGGGAGGGGCTGAGAGTGGGAGGACGGGGTGCGAGAGACGCGAGCAAGGG
CCCACAACGCGGGGTGAGGAATGGGCGGCAAGGAACGTTTCAACACCAAT
AGATGCCGAACGGGCCGGTTTGCGCGCGAAGGGAGGAGGGAGGATGGTAT
CGGGAGGGACGGGCTGTAGCGGCGAGAGGCCCCATGGGCCCGGGAAGGAC
CGCGAGGAGTGCGAGCGCCTGCAGCAAGAGGAGCTGCAGCGACGCGTACC
CATCCCCCCTCCGTCCAGGAGTGAGACCACGCCGCCGGCACCAACAGGGT
GGCGAGGGTCAAAGGAGCAGAAGAGTGAGATGGAAGACTTGAGTAGGTCC
GACGAGGAGGAGGAAGAGGAAGAGGAGGAGGTAGAAGAGGAGGAAGAAGA
GGAAGAAGAAGATGAGGAGGAAGAAGAGGAAGAAGAAGAAGAGGAAGAGG
AGGAAATTTCATGGGTGTCGTGGTACGTCAGCCTGAAAGGAAACGAATTT
ATGTGTGAAGTAGACGAGGAGTACATCCAGGACGACTTCAACTTGACCGG
ACTGAGCAGCCTGGTGCCCTACTACGACTACGCGCTGGACATGGTGCTGG
ACGTGGAACTTCCAATTGAGTCCATGACGGAGGAGCAGCACGAGCTGGTG
GAGGGCGCGGCGGAGATGCTCTACGGCCTTATCCATGCTCGCTACATACT
GACCAGCCGGGGGCTGCACGCCATGAACGAAAAGTACAAATCCAGTCTCT
TTGGTCGCTGTCCCCGTTTTCTATGCGGTACGCAGCCCGTCCTCCCCATC
GGCCTCGCCGACCACCCCCGCGTCAGCACCGTCAACGTCTTCTGCCCTCG
ATGCCGGGACGTTTTCGTGCCCCGTTCCACGCGCCACGCGGCGATGGACG
GCGCCTACTTCGGGACCACGTTCGCACATCTTTTCCTTCTGACGCATCCG
GAAGCCATCCCTCCTGCTGTGGAGCAAAGCTACGTTCCCCGCATCTATGG
CTTTAAAATCAACGCCGACAGCACTTACTACACTGCGGCCCGGCGACGAG
AGAATGAAGAGCGGGAGAGGAGGGCAGGGCGAGGAGCTGGTGGAGGAGGA
GGAGAAAGAGGAGAAGGCCGGGCCCCGTTGTCGTCTACCGCGATAATGCG
CCGAGTACGTCAGATGGTTCGAGATGGGCGGGACGGCAGGCAGGGCAGGT
AGGGGGGAAACCGGGGAAAAACTAAGGAGGACGGAGCGGAAATGGCCCAA
TTCTTGCCACCCTAGAATTATAGCAGGGAGCTTCTGTACATGCTGAGAAA
AACATTGGTAAATCTGTTGTCTCGTTGGATTTGGGTAGGCACATACTTCA
AGGGTGTCCCCTTCTCGTACATATCTCTTCGAAATCGAAATAAAACAATC
CGGTCATCGATCGGCATTTGTTCGGAGGTGGTCATAATGTTATTTTCACC
GTGCTGTAGTCACTCTTCGTGACATTGTTGTGAGTCCGCGCATTTTGACT
TTCAAGACCAGGAAAAGAGACAGG back to topprotein sequence of rna6696 >rna6696-protein ID=rna6696-protein|Name=rna6696|organism=Nannochloropsis gaditana|type=polypeptide|length=205bp
MTPNEIRAAVLHLYRNCLRSARRIPTQEQREIWLAYTRGKFKENRRITDV
RLKRAFQDGQEQLSRMNYFHDVRNRQIGSPHGGNGGPRRHPRQGAGGAAA
PASSGGEHAPLPAGSSPEASWSLKAFLETHLPGVSREELRQYQRCLEADG
FGSAGMLKFLREEDLGGWKTAHRRAMLDALSRLRKGKGKGGRTQAWVTLA
EPRRK back to topmRNA from alignment at CM002469.1:279814..281245+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6696 ID=rna6696|Name=rna6696|organism=Nannochloropsis gaditana|type=mRNA|length=1432bp|location=Sequence derived from alignment at CM002469.1:279814..281245+ (Nannochloropsis gaditana)
ACGCGCGaaaggggagcagggagaaAATGACAAGCTATTAATGGCACACA
CGGTGCAGAATCGTGAAGTTTTGATTCGATGTGCCTTTTTGGGTTGTGAG
AGGTTGTCTCACGTGGCCATGTTGTTTACGGGGGGTAAGGAGGCCTTTCG
ATCATCGTAGGAGGCCGGGCAGCTTCAACTCTCTTCATGTCCGCACGCTC
TAGGCGAACTAATTCCAGCGGACTTCCACAGGAAAAATTAGTTGTGAGTA
CTGCGTTTGGCTCCATATACTCTTGTGGGTCGGttgaggtggaagagggg
cggaaaGCGGTCGAGGTGAGGTTCTTGGTGGCGCAAATTTCTTCGACGAC
GCATCAGCAAAGAACGAGATCAGGTCCATTATGACACCCAACGAAATACG
TGCAGCAGTCCTTCATTTATACCGAAACTGTCTACGGGTAAGTCTCGGAA
ACGAATGAGCTGGGCTCCCCTGAAGACTGAGAAGATCCTTCCTCTAATTA
CAAGGCAGCATTTTGTAGGTTCGGTTTGTCCTATCTTCTATTTGATATCT
ACTGCAAACCAGAAAAGCAATTGAATGGCAATCACCTGACATGCGTTGCC
CGTATATCTTTCACCACTTGCCGTTCTTCGCACCAGTCCGCCCGGCGTAT
ACCTACACAAGAGCAACGCGAAATATGGCTAGCCTACACTCGCGGCAAAT
TTAAAGAAAACAGGCGGATAACCGACGTGCGTCTGAAGCGCGCCTTCCAA
GACGGCCAGGAGCAGCTATCTCGCATGAATTACTTCCATGACGTACGAAA
CAGGCAGATCGGAAGTCCGCAtggagggaacggagggCCTCGACGTCATC
CTCGAcaaggggccgggggcgctgccgcccctgcctcctctggCGGGGAG
CATGCGCCTCTCCCCGCGGGCTCCTCTCCGGAGGCTTCTTGGTCTTTGAA
AGCCTTCCTGGAGACGCACCTTCCAGGAGTCAGCCGCGAAGAATTGCGGC
AATACCAAAGATGCTTGGAGGCCGACGGCTTTGGGAGCGCGGGCATGCTC
AAGTTtctccgggaggaggatctggggGGCTGGAAGACTGCGCATCGGCG
TGCCATGCTGGACGCGCTCAGCaggctgaggaaggggaaggggaaagggg
ggaggacacaGGCGTGGGTGACACTGGCCGAGCCCCGTAGGAAATAATCG
AatgggcgggcgggggctgtGCCGTGCATTGTACATAAATTGCCATAAGA
GCCACAAGAGCGGGACTGAGCAGTAATGTcgcacccccctcctcaggGTG
GGGATACCGCGAGCAAGACGCGAGGGCTCTACGCGTACGTTTTCTTTGTT
CGGTCccagcttttcccctcccccacccccccatcctcctctttggcctG
GCAACGGCTGTGGCCGGCTCCCACGAacccca back to topCoding sequence (CDS) from alignment at CM002469.1:279814..281245+ >rna6696 ID=rna6696|Name=rna6696|organism=Nannochloropsis gaditana|type=CDS|length=1236bp|location=Sequence derived from alignment at CM002469.1:279814..281245+ (Nannochloropsis gaditana)
ATGACACCCAACGAAATACGTGCAGCAGTCCTTCATTTATACCGAAACTG
TCTACGGTCCGCCCGGCGTATACCTACACAAGAGCAACGCGAAATATGGC
TAGCCTACACTCGCGGCAAATTTAAAGAAAACAGGCGGATAACCGACGTG
CGTCTGAAGCGCGCCTTCCAAGACGGCCAGGAGCAGCTATCTCGCATGAA
TTACTTCCATGACGTACGAAACAGGCAGATCGGAAGTCCGCAtggaggga
acggagggCCTCGACGTCATCCTCGAcaaggggccgggggcgctgccgcc
cctgcctcctctggCGGGGAGCATGCGCCTCTCCCCGCGGGCTCCTCTCC
GGAGGCTTCTTGGTCTTTGAAAGCCTTCCTGGAGACGCACCTTCCAGGAG
TCAGCCGCGAAGAATTGCGGCAATACCAAAGATGCTTGGAGGCCGACGGC
TTTGGGAGCGCGGGCATGCTCAAGTTtctccgggaggaggatctggggGG
CTGGAAGACTGCGCATCGGCGTGCCATGCTGGACGCGCTCAGCaggctga
ggaaggggaaggggaaaggggggaggacacaGGCGTGGGTGACACTGGCC
GAGCCCCGTAGGAAATAAATGACACCCAACGAAATACGTGCAGCAGTCCT
TCATTTATACCGAAACTGTCTACGGTCCGCCCGGCGTATACCTACACAAG
AGCAACGCGAAATATGGCTAGCCTACACTCGCGGCAAATTTAAAGAAAAC
AGGCGGATAACCGACGTGCGTCTGAAGCGCGCCTTCCAAGACGGCCAGGA
GCAGCTATCTCGCATGAATTACTTCCATGACGTACGAAACAGGCAGATCG
GAAGTCCGCAtggagggaacggagggCCTCGACGTCATCCTCGAcaaggg
gccgggggcgctgccgcccctgcctcctctggCGGGGAGCATGCGCCTCT
CCCCGCGGGCTCCTCTCCGGAGGCTTCTTGGTCTTTGAAAGCCTTCCTGG
AGACGCACCTTCCAGGAGTCAGCCGCGAAGAATTGCGGCAATACCAAAGA
TGCTTGGAGGCCGACGGCTTTGGGAGCGCGGGCATGCTCAAGTTtctccg
ggaggaggatctggggGGCTGGAAGACTGCGCATCGGCGTGCCATGCTGG
ACGCGCTCAGCaggctgaggaaggggaaggggaaaggggggaggacacaG
GCGTGGGTGACACTGGCCGAGCCCCGTAGGAAATAA back to top
|