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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100040g46.2024.mrna |
| Orig protein id | gnl|cribi|Naga_100040g46.2024 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:275076..277232 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6694 ID=rna6694|Name=rna6694|organism=Nannochloropsis gaditana|type=mRNA|length=2358bp
ATGCGAGGCCTTAGCTCTTCTCACGTTTTCCTGCTGCTGGTGATCAGCGC
GGCAGTTTTGGGGAAGGGCACCGTCGCGTTTTTACCTGTTCCTGGAATCA
AATCATCACGGGAAAGGGCATTGATAAGACCTCTGCGTGCATCCTTGAAT
CAAGAGAGCAGCAGTGGCAAAAATGACGTGGGAAGCAGTCGAGACGAGTT
CCTCCGAGGGTTCCTTGCCGCTGCCACGGGGGCAATGACAGGCGCCATTG
CGACGGGACGCGAGCCACGGGCTGCGGAAGCCGTTTCAGCCGGCGACGTG
GACCCGGAGCGGCCGCAGACCGTGCAAACCTATTTGGAGGACATCGACAA
CTACAATCTGAAATGCCCGGACTTCCCCAAAAACCTTGAATGGGTGAACA
CGGGCCCCTTGAGCTTCCAGAAGGAGCTTCGAGGGAAAGTGGTTTTATTG
GATTTCTGGACCTACTGCTGTATCAATTGCATGCATACCCTCCCAGTCCT
GGCCAGGCTGGAGAAGAAATACGCTGGAGAGCCCTTCACAGTGATTGGGG
TTCACTCTGCCAAGTTCGAGAACGAGAAGGACACGCGCAACATTAAGGAG
GCCATCGCCCGGTATCAGATCCAGCACCCGGTGGTCAACGACAGGGACAT
GCAGATGTTCTCCGCCGTGGGCGTCTCCTCCTGGCCCAGCCTGGTGCTCG
TCGGCCCCCGGGGCAACCTCCTCTCCATCTGGCCAGGGGAGGGGAACGGA
GAGAAGGTGGACGCTTTCATTCAGGGAGCATTGGCCTTCTATGACGGCAA
GGGCCAGCTGGATAAGGCTCCCCTCAAAGTCTCCCGAGCCAGCGGCTCCC
GCGGCGGCTTACCGGGCTCTCCTCTCAGCTACCCCGGCAAGCTCCACGTG
GACCCCGCGTTGCCCCGCCTCTTTGTCAGCGACTCCGGGAACAACCGTGT
CCTCGTGCTGGACCGGAAGACGGGGGCCTTGCTGGCGGCCATTGGCTCGG
CCACGGGGGAGCCCGGCCTGGAGGACGGAGACTTTGAGTCGTCGCGCTTC
ACCAACCCGCAAGGTCTCTGCTTGTCCGTGGACGGCCGGGTCCTCTACGT
CTGCGACACGGACGCGCACGCCCTGAGGGCCATTGACCTGGAGAAGAAGG
TGGTGTCGACGCTGGCGGGGAACGGGGAACAGGGCTTTGACTACACGGGC
GGCAAGGGACGGAGGGAGCAATACCTGAGCTCCCCCTGGGACGTGGTCCT
GAAACCCGCTGCGGCCGGTACCTCAACCTTGCTGGTGGCTATGGCAGGCA
CGCATCAGATCTGGGAGGTGGATGCCCTCTCGGGCCTGGCTCGGTGTTAT
TCGGGCACTGGACGGGAGGCGGAGACGAACGCGGGGAACCGCCTCGACGC
CGCGTGGGCCCAGCCCTCGGGACTGGCCGTGGGAGGGCAGGCCTTGTACG
TGGCTGACTCCGAGTCCAGCACCGTGCGAGAATTGAGCCTGGAAGGCAGC
GGCAAGAGCCGCACGCTAGTGGGTGGGGCTCTTGGGACTTCTCTCTTCGC
CTTCGGAGACAAGGACGGAAAGGGGGCGCAGGCGCGGCTGCAGCACCCGC
TCGCGGTGTCAGTGGTCCGCGGAGACTCCCAGGTGGTGGTCGCCGACTCC
TACAACCACAAACTGAAGCTTGTGGACCCAACGCAAGGCACAGTGAAGAC
CTTGGTGGGCTCGGGAAGGCCGGGGCTGAGGGACGGAAAGCAGAAGCAAG
GAGAGTTGTGGGAGCCTGGCGGTTTGGCTTCCGACCCCACCAACCCCAAC
CTCCTCTGGGTGGCAGACACCAATAACCACGCTGTGCGCGTGTTTGACCT
GGTAAGCAACGAGCTGACCACTTTCGCGCTGGACAAGGACGTGCCCACGG
CCGAGGCGGGGGCCAGTGGGAAAGAAGCGGGGAGGGGGAGGCCGAGTGAG
CGGTCCATTTTGAATCGACGTCGGAGCCGCGTTGTCGACTTGGGGCCTGT
GGCGAAACAGGGTCGCGTGCAATTGCAAGTTGACGTGCCGGAGGGTTTAC
AGTTCACAGCGACCCGCACGAGCGAATGGCAGCTGGTTGGAGCGGGTGCT
GCGGCTGATACCCGCGGCATCATCAACAAGGAGAGCGGAGCCAAGGGGAT
GGCGATAGTGACGATCCCATCGACGGTGGAGGACGGGGCGATGGTGGAAT
TAGAAAGCGCAGTGTATTTCTGCGAGGAGGAGAAAGGCGTCTGTCGGACA
GATGGCGTCGTGTTTCGCTTGCAAGTGAAAAACGGTGGGCCGTCCAGGAT
CGTGGCCTCTCACGTCGTGGAACGGGCGTCATCGAAACCCCGCGTGGGTG
CTGCGTGA back to topprotein sequence of rna6694 >rna6694-protein ID=rna6694-protein|Name=rna6694|organism=Nannochloropsis gaditana|type=polypeptide|length=315bp
MVYSHSWSAFFAPPSSVSHVAMRANGGSWFSAHPSSSGSVHTTLLEKTRS
QQSQRRQQKSIVGEEQSSSHHRRDLLRKALAFGGLLLGNTAVQTLSPWRQ
PLHLVTRFTDPASASELGGGMPQFEAQAMSTGRAAEFIKQHCQGILRAYN
ETGATPVFLYRGENINRPTLLKCPPDLMDVNTYQEGKEAAAFFAKMEEAM
EGLPVRPSLGHLATSDMRSAAAWGTPCSVWPLGNELHYAWLRDAKAFWPV
RAEKRDISVDDIRACVKREIQVDQNLDMAVKMGHEVMLSTGEFGFLVVPV
AYEREVRARLGLGYE back to topmRNA from alignment at CM002469.1:275076..277232+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6694 ID=rna6694|Name=rna6694|organism=Nannochloropsis gaditana|type=mRNA|length=2157bp|location=Sequence derived from alignment at CM002469.1:275076..277232+ (Nannochloropsis gaditana)
CGAGTCGGTCGAAGGATGGGGCGACATCCACGAGGCATCACCACGCACAA
AGAATAGAAGGAGCATGGGTCATGAAGCGGCAAGTGAACGGGATGGACGG
CCTTGTGCCTGCCATGCCTAATACCATTTGGCTAATAGCGTCTCCGCCTT
GCGTCGACTCCCGGCGGCTTGAAGCTTCGGCGAGGCAGGCACTtgtccct
gccccgcccgtcACAGATGTTTATGTCACCTCTACTCATGCGagcaccac
cacgtcccgGACAGACCTCCGCCGTCCTCTCCTACTATGGTCTATTCGCA
CTCTTGGTCAGCATTTTTtgcgcctccctcgtcggtGAGCCATGTCGCGA
TGCGAGCAAACGGCGGCAGCTGGTTTTCGgcccacccttcctcttcaggg
TCCGTGCACACCACCCTGCTTGAAAAAACGAGGTCCCAGCAAAGCCAGCG
GCGTCAACAGAAATCTATCGTCGGGGAGGAACAATCCTCATCCCACCACC
GTCGCGACCTCCTTCGAAAGGCATTGGCCTTCGGTGGACTCTTGCTGGGG
AACACTGCCGTGCAGACTCTGTCGCCGTGGAGACAGCCACTTCACCTTGT
AACCCGTTTCACTGATCCGGCAAGTGCATCGGAATTGGGGGGCGGCATGC
CGCAATTCGAAGCGCAAGCCATGTCGACGGGCCGGGCTGCGGAGTTCATC
AAGCAGCATTGCCAAGGGATCCTGCGGGCGTACAACGAGACGGGCGCGAC
GCCTGTGTTCCTGTATCGAGGCGAAAACATCAACAGACCGACCTTGCTGA
AATGTCCCCCGGACTTGATGGACGTGAACACCTaccaagaaggaaaggag
gcagcggccttTTTCGCCAAGATGGAagaggccatggaggggcTTCCCGT
CAGGTAGGGTTGGGACACACGTAGAGGGATCGCGGCCCTTGAGCCTCTCA
CCCCCGTGTGGCCCCTGCATTCCTTTACTCGCTCTCAGGCCCAGTCTGGG
ACATCTAGCCACCAGCGACATGCGAAGTGCCGCGGCCTGGGGTACTCCCT
GCTCGGTCTGGCCCCTTGGTAGGTGCCTCCATCTTTTCGACCTCCCCTGG
AACCCCTACATCTGACAGCTGCTGCCAGCTGTAACCGTATTGAAAGCCTT
TTTGGCATGTCCCGTGTCACTTTCGTTCCCTTTCAATCCTTACCTGccct
ttcgccttcccttcttctctcgcTTCAGGCAATGAGCTTCACTATGCGTG
GCTCCGAGATGCCAAGGCCTTCTGGCCGGTGCGCGCGGAGAAGCGCGACA
TATCTGTGGACGACATCCGCGCATGCGTGAAGCGGGAGATCCAGGTGGAT
CAGAATCTGGACATGGCCGTGAAGATGGGCCACGAAGTAATGCTCAGCAC
GGGGGAGTTCGGCTTTCTGGTCGTTCCCGTGGCGTACGAGCGGGAGGTCC
GAGCGCGGCTTGGCCTGGGGTATGAGTGAGACGGAAACTAGGAACCTGTG
TGGAACCCAGCTTGAAGCTACTTAACGATGGAGGCATCGGTAAAGTGGTT
CGTTGAAGCGCTACAGATATTTTTGGAATTCGATCTTGCGCAGCTACCTG
AAGGGCTGTAGATCGGAGGCGAGCGTGAAAGTGTACATATATATGAGCGG
CGAGTCAGTAAAATCTGGTTTTCGATACATGAAGATTCAAGGGGCAGTTT
CGCTGCATCGGAGGACCTCAATGTTCGGTCTTCCGATATCATGGAGCCAC
GTAGACTTTGCttacttcctctttttcgtTTAGACCATTCACTGCGAAAT
AAGTGCAATGGACTTTAGAATCCTCGCATTGCTTCATCGCAACACATATT
CCTTATCCCTTCCAAAAAATGCTCGACGGGACCATTTGTTTCAGAGTGCG
AGTATCTAAAATAGTGTTTTTGAGTTTATTGCGTGCCGTGAAGGGATCTT
TTTGGTTCATCGACAAGAGAACAAAGGACACATCCCTGCGTTCTCTGCTT
CCAGGGTGACTCGACTGGCGTATCATCGCAAATGCACAGCAAATTCTCTA
TAGAATTAAAAAAGAAGCACAAAATTTCCGACGCAATCAAAAGAGCGGAT
GAACGCTCCAACGAAGCCCGCGGCGCCCCCGAGGGATGACACTGGTCGGC
TGCTTCT back to topCoding sequence (CDS) from alignment at CM002469.1:275076..277232+ >rna6694 ID=rna6694|Name=rna6694|organism=Nannochloropsis gaditana|type=CDS|length=2844bp|location=Sequence derived from alignment at CM002469.1:275076..277232+ (Nannochloropsis gaditana)
ATGGTCTATTCGCACTCTTGGTCAGCATTTTTtgcgcctccctcgtcggt
GAGCCATGTCGCGATGCGAGCAAACGGCGGCAGCTGGTTTTCGgcccacc
cttcctcttcagggTCCGTGCACACCACCCTGCTTGAAAAAACGAGGTCC
CAGCAAAGCCAGCGGCGTCAACAGAAATCTATCGTCGGGGAGGAACAATC
CTCATCCCACCACCGTCGCGACCTCCTTCGAAAGGCATTGGCCTTCGGTG
GACTCTTGCTGGGGAACACTGCCGTGCAGACTCTGTCGCCGTGGAGACAG
CCACTTCACCTTGTAACCCGTTTCACTGATCCGGCAAGTGCATCGGAATT
GGGGGGCGGCATGCCGCAATTCGAAGCGCAAGCCATGTCGACGGGCCGGG
CTGCGGAGTTCATCAAGCAGCATTGCCAAGGGATCCTGCGGGCGTACAAC
GAGACGGGCGCGACGCCTGTGTTCCTGTATCGAGGCGAAAACATCAACAG
ACCGACCTTGCTGAAATGTCCCCCGGACTTGATGGACGTGAACACCTacc
aagaaggaaaggaggcagcggccttTTTCGCCAAGATGGAagaggccatg
gaggggcTTCCCGTCAGGCCCAGTCTGGGACATCTAGCCACCAGCGACAT
GCGAAGTGCCGCGGCCTGGGGTACTCCCTGCTCGGTCTGGCCCCTTGGCA
ATGAGCTTCACTATGCGTGGCTCCGAGATGCCAAGGCCTTCTGGCCGGTG
CGCGCGGAGAAGCGCGACATATCTGTGGACGACATCCGCGCATGCGTGAA
GCGGGAGATCCAGGTGGATCAGAATCTGGACATGGCCGTGAAGATGGGCC
ACGAAGTAATGCTCAGCACGGGGGAGTTCGGCTTTCTGGTCGTTCCCGTG
GCGTACGAGCGGGAGGTCCGAGCGCGGCTTGGCCTGGGGTATGAGTGAAT
GGTCTATTCGCACTCTTGGTCAGCATTTTTtgcgcctccctcgtcggtGA
GCCATGTCGCGATGCGAGCAAACGGCGGCAGCTGGTTTTCGgcccaccct
tcctcttcagggTCCGTGCACACCACCCTGCTTGAAAAAACGAGGTCCCA
GCAAAGCCAGCGGCGTCAACAGAAATCTATCGTCGGGGAGGAACAATCCT
CATCCCACCACCGTCGCGACCTCCTTCGAAAGGCATTGGCCTTCGGTGGA
CTCTTGCTGGGGAACACTGCCGTGCAGACTCTGTCGCCGTGGAGACAGCC
ACTTCACCTTGTAACCCGTTTCACTGATCCGGCAAGTGCATCGGAATTGG
GGGGCGGCATGCCGCAATTCGAAGCGCAAGCCATGTCGACGGGCCGGGCT
GCGGAGTTCATCAAGCAGCATTGCCAAGGGATCCTGCGGGCGTACAACGA
GACGGGCGCGACGCCTGTGTTCCTGTATCGAGGCGAAAACATCAACAGAC
CGACCTTGCTGAAATGTCCCCCGGACTTGATGGACGTGAACACCTaccaa
gaaggaaaggaggcagcggccttTTTCGCCAAGATGGAagaggccatgga
ggggcTTCCCGTCAGGCCCAGTCTGGGACATCTAGCCACCAGCGACATGC
GAAGTGCCGCGGCCTGGGGTACTCCCTGCTCGGTCTGGCCCCTTGGCAAT
GAGCTTCACTATGCGTGGCTCCGAGATGCCAAGGCCTTCTGGCCGGTGCG
CGCGGAGAAGCGCGACATATCTGTGGACGACATCCGCGCATGCGTGAAGC
GGGAGATCCAGGTGGATCAGAATCTGGACATGGCCGTGAAGATGGGCCAC
GAAGTAATGCTCAGCACGGGGGAGTTCGGCTTTCTGGTCGTTCCCGTGGC
GTACGAGCGGGAGGTCCGAGCGCGGCTTGGCCTGGGGTATGAGTGAATGG
TCTATTCGCACTCTTGGTCAGCATTTTTtgcgcctccctcgtcggtGAGC
CATGTCGCGATGCGAGCAAACGGCGGCAGCTGGTTTTCGgcccacccttc
ctcttcagggTCCGTGCACACCACCCTGCTTGAAAAAACGAGGTCCCAGC
AAAGCCAGCGGCGTCAACAGAAATCTATCGTCGGGGAGGAACAATCCTCA
TCCCACCACCGTCGCGACCTCCTTCGAAAGGCATTGGCCTTCGGTGGACT
CTTGCTGGGGAACACTGCCGTGCAGACTCTGTCGCCGTGGAGACAGCCAC
TTCACCTTGTAACCCGTTTCACTGATCCGGCAAGTGCATCGGAATTGGGG
GGCGGCATGCCGCAATTCGAAGCGCAAGCCATGTCGACGGGCCGGGCTGC
GGAGTTCATCAAGCAGCATTGCCAAGGGATCCTGCGGGCGTACAACGAGA
CGGGCGCGACGCCTGTGTTCCTGTATCGAGGCGAAAACATCAACAGACCG
ACCTTGCTGAAATGTCCCCCGGACTTGATGGACGTGAACACCTaccaaga
aggaaaggaggcagcggccttTTTCGCCAAGATGGAagaggccatggagg
ggcTTCCCGTCAGGCCCAGTCTGGGACATCTAGCCACCAGCGACATGCGA
AGTGCCGCGGCCTGGGGTACTCCCTGCTCGGTCTGGCCCCTTGGCAATGA
GCTTCACTATGCGTGGCTCCGAGATGCCAAGGCCTTCTGGCCGGTGCGCG
CGGAGAAGCGCGACATATCTGTGGACGACATCCGCGCATGCGTGAAGCGG
GAGATCCAGGTGGATCAGAATCTGGACATGGCCGTGAAGATGGGCCACGA
AGTAATGCTCAGCACGGGGGAGTTCGGCTTTCTGGTCGTTCCCGTGGCGT
ACGAGCGGGAGGTCCGAGCGCGGCTTGGCCTGGGGTATGAGTGA back to top
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