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Properties
| Property Name | Value |
|---|
| Product | centromere protein j |
| Orig transcript id | gnl|cribi|Naga_100040g34.2018.mrna |
| Orig protein id | gnl|cribi|Naga_100040g34.2018 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:247202..250283 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6683 ID=rna6683|Name=rna6683|organism=Nannochloropsis gaditana|type=mRNA|length=1723bp
AGTTCACATTTCCGTGGAGAAAGCGTACGCGTGCTGTCGCCTTAGCGCGC
TCATCGCTTACAAGTAGCAACCATAGGCTCGTGTATGCAGGGGGGCCGCT
TTTGCACGGCACACTTCTTTATGTGTGGCGCGCGATTTGAACTCACAAAA
ATATATACGAATGCGCTTTTTGACAACTCAGTCGCGTGGTAACATTTCCC
CAGGTCCATGCGCGACAAGCTTTTGGTGGCCGCAAAGTGTAGTGGCGGCG
CAGGGATTCTTTTATGTGCATACGCCGGGGAAGATGTGTTTTTGATTGAC
ACCAAGCAACCGGGAAATGTCGTGGCTCTTCCCGTCCCTGATCTTTCAGC
GGCTTCCGTGGACGGCACCGAGTCCAATGCTGATGGCTTGGGGCAAGTGG
AGGCTCTGGCTTTGACGGGGAATGGGAGGCGAGCGGCAGCACTGTACAGG
CACAAAGTACTGGCGCTGTGGGACACAAGCGATAGCGCCAGCCCTGTCCT
GCTCTCCCACCGTTTGCTTCCCAAAAAAGCCTTTGCGCTCCTATTTGCTA
GACTTGATTCGCCATCTGGCGACCAAGATCTCGGCCCGGGGACGGGGCAC
CAAGAGGATGTCGTGCTCGTCAACGATAAAGTCGGGGACGTTCGGATGTA
CCGGGCCACAGCCGAAATGCTACCTAAGACCTCGGCATTCCTGCTTGGCC
ATACAGCGTCTGTGGGCACCTGCTTGGACCTGTCCCCTGACGGGGCACGC
CTTGCTACCGGGGATCGGGACGAGAAAGTCCGCATCTCTCATTTCCCCTG
CACCGTCGTCATCGAGACGTACCTACTGGGCCATGAGAGATTCGTCAGCT
CGGTCAACTTTGTAGAAAATGGCGCGAAGGTGTTGACAGGCAGCGGGGAC
CAAACCCTTGCCTTGTGGGACGCGCACACAGGCTGCGAGGTTGTAAGGGA
AAGTCTCCCCCCCCTCGAGGGGGAGCTCGTCGCGGAGGGCGAGCAGCTTG
GGCCGGAGAACGGGGAAAGAGGACGCAACTCGAGCAAGAGCCCAAGTACT
ATCGTCCCCTGTGCGGTGGCTGTGACTTCAGACAGCGCCCTAGCTGCCGT
CACGTTGCTAGGCCAGAGCAAGCTTTTGGTGTACGCCCTGCCCGCTCTGA
GCTTGATCCAGACACTGGACTTGCCGTCTGTACCTGTGGGCGCCGCATTT
ATGGATAACCCGGAAGAAGCGGAAGGGGAAGTCAGGAGAGTGCTGTATGT
GACTGTGGGCGCGCCGGAATACCTCTTGGCGTACAGGGTGACCAAAGACG
GGGAGGGGGGGGCGTGGAGGCTGGAGGCGGCTGAGGAAGGGACAGGGGTG
CTGGTCAGTGTGAGACTCTTTGGGTTAAAAATGGGCTTGAAGGCCTCTTT
GACCGTGGACGAGGGAGACGAGGATTTCCTGGGCGGTATGACCAAGGAGA
ACTTGACCGTGCGGTGTGACTGGAACTCCCGGCAACGCAGGGAAGAGCAC
GCGGAGAGGGCTCGTCGGAAACGCCAGGACAAGAGACATCGGGAGAGGGA
CGGGGCGGTCGCGGAGGAGGGGAAAGAGGGGGAAGCGGACCTGCCAGCCA
AGGCGAAGCCTCGGACAGGGACACAATCTGGGGAAAAGGAGGGGCGGGAG
GAGGATACGCTGGCAGGGCAGGCATGATCAAAGCACAAAGAATACCAAAG
TAATGCAAGGGCCATGAGGCACC back to topprotein sequence of rna6683 >rna6683-protein ID=rna6683-protein|Name=rna6683|organism=Nannochloropsis gaditana|type=polypeptide|length=893bp
MPFHGTEDPLSPSRGLAHTPPRNKRTPRCAMGNESQPGDNTTPMLGMTAQ
MKNGQHESPSQSTPRSFLRKGSRREPSAMHRLKSGISPSPSSSSKPIPVT
PSSTRKSKPARKRSERSPLALVSQARTRGTTTEAVRATDSKQGTAMEEPL
PGRSSYPVPSPTEGYLGEGGGVGEETSWREERESKSTSQEKVEVREHSFD
GNATKSFDPYWPPSAAGTAEAPDVMDGREWRMRLFHADSEEEDREGGGWD
QEGGRCEDQASFLCSGSEMAAWQARHREEMTEFESLERALAGFPAISLQD
GPEPWAANGVQGMGWTAAVDQEGRPAIVGEEAVEEEEEEEEEEEDDDDEE
DEEDEMEPGHVGENLTADRGREDGKQRGKFQENRTKSHSNERFCEGNVGL
PPPHPSFPSSLDTCLSCGSRRGSLLLKALENKQEEIERELARAEKETKAA
EKQRRRSEAMLAEARSRKEQVEAWAARERAAVEKWREDQRELVGKEKKAF
LREQAAATRCLEVQRALPTREERVEREALLATIEKMKLDAEGQRKRWAAN
SKRQAALIQEQQARLEELQGQVESAKTGTASPGLRSGIGPRGQNASSMSA
ARQPRNLPLPASSLSTGLRESRPCARVGARPLSHPTSASPLRLEKKALGA
GHSMGVPPCSFLSRQGDGKAGAEEGTNAVQEGSSPGYPTSPRPYGVREYT
VTPPSSAQSIIGCTSDLSWGGARTSPSAAIISERPPPFAPPYHYLHQGQE
LFRRPLPVAKQDSQPASGAEDSSSSVLTSEKKAKQPAASGKGGGGKTIRK
LPDGREEWHYSNGTVKEVHPNGKSIVHFMNGDIKTVEAGTGDVVYWYAAN
QTKHITVAASGLEIFEFPSGQVERHYPNGVREIQPPGMGVINV back to topmRNA from alignment at CM002469.1:247202..250283+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6683 ID=rna6683|Name=rna6683|organism=Nannochloropsis gaditana|type=mRNA|length=3082bp|location=Sequence derived from alignment at CM002469.1:247202..250283+ (Nannochloropsis gaditana)
ACACAATGTGCGACCAGCATTTTTATGCCATACCTCGAGATTAACATCCA
GCAATCCTTTTCCCCATGAAATACAGCACAAATGTACCACTGGTGCTAAG
GAGGCTTCTTGTCGTTTGCTTTGACTGTTCTCCGTCCAGCCGCACCCGTC
TTTTCGTTCTTCACCACTCCCGCGCCTCACTTTGCCCGCCGGTCCCTGCG
TGAAAAATATGCCTTTTCATGGCACAGAAGATCCTCTTAGCCCTTCCCGT
GGCTTAGCCCACACTCCACCTCGCAATAAGAGGACTCCAAGGTGCGCCAT
GGGCAATGAGTCTCAACCAGGCGATAATACTACGCCGATGCTTGGCATGA
CGGCACAGATGAAGAACGGCCAGCACGAAAGCCCGTCCCAAAGCACACCA
CGTTCATTCCTGCGCAAAGGGTCGCGAAGGGAGCCCTCTGCAATGCATCG
ACTCAAGTCTGGCATTTCtccgtctccatcctcttcctcgaagCCGATTC
CTGTAACCCCCAGTAGCACCCGGAAGAGCAAACCTGCCCGCAAGCGCTCG
GAGCGGTCCCCCTTGGCGCTCGTCTCACAGGCACGGACGAGGGGCACGAC
CACCGAAGCCGTGAGGGCGACGGACTCGAAACAGGGCACTGCCATGGAGG
AACCGTTGCCCGGGCGGTCCTCATATCCTGTCCCCAGCCCCACCGAGGGC
TACttgggagaaggtggaggtgtgggggaggagacgtcttggagggaaga
aagggaaagcaagTCCACGAGCCAAGAGAAAGTAGAGGTGCGCGAGCACA
GCTTCGACGGAAATGCGACGAAGAGCTTCGATCCGTACTGgccgccctcg
gccgccggGACCGCGGAAGCCCCGGACGTGATggatggaagggagtggag
gatgcgccttttccacgcggacagcgaagaggaggaccgagaggggggag
gctgggaccaggagggcgggcggtgtGAGGATCAGGCTTCGTTCCTGTGC
TCTGGCAGCGAAATGGCAGCGTGGCAGGCGcggcacagggaggagatgac
ggAGTTCGAGAGCCTGGAGCGGGCCTTGGCAGGGTTTCCCGCCATTTCTC
TCCAGGACGGGCCCGAGCCATGGGCTGCCAACGGGGTGCAAGGAATGGGA
TGGACGGCGGCGGTAGACCAGGAGGGACGTCCAGCGAtagtgggggagga
ggcggtggaggaggaggaggaggaggaggaggaggaggaggacgacgacg
acgaagaggacgaggaggacgaaatggAACCAGGTCACGTCGGGGAGAAC
TTGACTGctgacagaggaagagaagatgGAAAGCAGCGCGGGAAGTTCCA
GGAAAACCGCACCAAAAGCCACTCGAACGAACGCTTCTGCGAGGGAAATG
TcggtcttccccccccacatccttcgttcccttcctccctcgacaccTGC
TTGAGCTGTGGCAGCCGGCGTGGGTCGTTGCTTTTAAAAGCGCTGGAAaa
caagcaggaggagatcgagcgggagctggcacgggcagagaaggagaccA
AGGCGGCCGAAAAACAGCGACGCCGGTCCGAGGCCATGCTGGCCGAGGCC
CGGAGCCGGAAGGAGCAAGTGGAGGCATGGGCCGCCAGGGAGCGGGCGGC
AGTTgagaaatggcgcgaagacCAACGGGAGTTGGtaggcaaggagaaga
aagcttTCCTCCgggagcaggcggcggcaACGCGCTGTTTGGAAGTGCAA
CGCGCGTTGCCGACGCGGGAGGAACGGGTCGAGCGGGAGGCCCTGCTCGC
CACCATCGAGAAGATGAAGCTGGACGCCGAAGGgcaaaggaagagatggg
ccGCCAACAGCAAGCGGCAGGCGGCTCTGATCCAGGAGCAACAAGCCCGT
CTGGAGGAGCTTCAAGGCCAAGTGGAATCGGCGAAGACAGGGACGGCGAG
CCCCGGGCTTCGGTCAGGGATTGGGCCCAGAGGCCAGAACGCGTCGTCCA
TGTCCGCCGCAAGGCAGCCGAGGAACTTGCCCCtgccggcctcctccctt
tccaccggTCTCCGGGAGAGCAGGCCTTGCGCCCGTGTGGGCGCAAGGCC
TCTGTCCCATCCTAcgtccgcttcccccctcagGCTTGAGAAAAAAGCAC
TCGGGGCTGGCCATTCTATGGGAGTCCCACCATGCTCTTTTTTGTCTCGG
CAGGGTGACGGAAAGGcaggagcggaggaagggaccaATGCCGTCCAAGA
GGGTAGCTCCCCCGGGTATCCCACCTCTCCAAGGCCGTACGGCGTTCGCG
AGTATACGGTGacacccccttcttccgcccaAAGCATCATCGGATGCACA
TCCGACTTGTCATGGGGCGGAGCAAGGACCTCACCATCGGCAGCCATCAT
CAGCGAGAGGCCGCCTCCTTTCGCCCCCCCTTATCATTACTTGCACCAAG
GCCAGGAGCTCTTTCGACGACCGCTACCTGTAGCCAAGCAGGACTCTCAA
CCTGCTTCTGGGGCAGAGGACTCTTCATCCTCTGTCCTTACGTccgaaaa
gaaagcaaaacaACCCGCCGCGTCAGgtaaagggggaggaggaaaaacca
TCCGCAAGCTTCCAGACGGCCGGGAGGAGTGGCACTACTCCAACGGCACG
GTCAAGGAGGTGCACCCGAACGGAAAGAGCATCGTACACTTTATGAACGG
AGACATCAAGACTGTCGAGGCGGGAACAGGGGACGTAGTCTACTGGTACG
CTGCCAATCAGACAAAGCATATCACAGTTGCTGCCTCGGGGTTGGAGATA
TTTGAGTTCCCTTCCGGTCAGGTGGAGCGGCACTACCCGAATGGAGTGCG
TGAGATCCAGCCACCTGGTATGGGGGTCATCAATGTGTAAGAGCGCGTGC
CTTCCTGTGAGCAGACAGTGGCAGGGCGGCACGTATCTGAAATGAGAGCC
AAACATGCGTTACTCAAGAGACGAATGGAAAGGACTTGAAGACGGAAAGC
AACATCAGAAGACGTATGTAAGAACAAAATAACGAAAAAAGACTCTTATT
GCACATCTTTATTTAATATGTCATCATAGAAA back to topCoding sequence (CDS) from alignment at CM002469.1:247202..250283+ >rna6683 ID=rna6683|Name=rna6683|organism=Nannochloropsis gaditana|type=CDS|length=2682bp|location=Sequence derived from alignment at CM002469.1:247202..250283+ (Nannochloropsis gaditana)
ATGCCTTTTCATGGCACAGAAGATCCTCTTAGCCCTTCCCGTGGCTTAGC
CCACACTCCACCTCGCAATAAGAGGACTCCAAGGTGCGCCATGGGCAATG
AGTCTCAACCAGGCGATAATACTACGCCGATGCTTGGCATGACGGCACAG
ATGAAGAACGGCCAGCACGAAAGCCCGTCCCAAAGCACACCACGTTCATT
CCTGCGCAAAGGGTCGCGAAGGGAGCCCTCTGCAATGCATCGACTCAAGT
CTGGCATTTCtccgtctccatcctcttcctcgaagCCGATTCCTGTAACC
CCCAGTAGCACCCGGAAGAGCAAACCTGCCCGCAAGCGCTCGGAGCGGTC
CCCCTTGGCGCTCGTCTCACAGGCACGGACGAGGGGCACGACCACCGAAG
CCGTGAGGGCGACGGACTCGAAACAGGGCACTGCCATGGAGGAACCGTTG
CCCGGGCGGTCCTCATATCCTGTCCCCAGCCCCACCGAGGGCTACttggg
agaaggtggaggtgtgggggaggagacgtcttggagggaagaaagggaaa
gcaagTCCACGAGCCAAGAGAAAGTAGAGGTGCGCGAGCACAGCTTCGAC
GGAAATGCGACGAAGAGCTTCGATCCGTACTGgccgccctcggccgccgg
GACCGCGGAAGCCCCGGACGTGATggatggaagggagtggaggatgcgcc
ttttccacgcggacagcgaagaggaggaccgagaggggggaggctgggac
caggagggcgggcggtgtGAGGATCAGGCTTCGTTCCTGTGCTCTGGCAG
CGAAATGGCAGCGTGGCAGGCGcggcacagggaggagatgacggAGTTCG
AGAGCCTGGAGCGGGCCTTGGCAGGGTTTCCCGCCATTTCTCTCCAGGAC
GGGCCCGAGCCATGGGCTGCCAACGGGGTGCAAGGAATGGGATGGACGGC
GGCGGTAGACCAGGAGGGACGTCCAGCGAtagtgggggaggaggcggtgg
aggaggaggaggaggaggaggaggaggaggaggacgacgacgacgaagag
gacgaggaggacgaaatggAACCAGGTCACGTCGGGGAGAACTTGACTGc
tgacagaggaagagaagatgGAAAGCAGCGCGGGAAGTTCCAGGAAAACC
GCACCAAAAGCCACTCGAACGAACGCTTCTGCGAGGGAAATGTcggtctt
ccccccccacatccttcgttcccttcctccctcgacaccTGCTTGAGCTG
TGGCAGCCGGCGTGGGTCGTTGCTTTTAAAAGCGCTGGAAaacaagcagg
aggagatcgagcgggagctggcacgggcagagaaggagaccAAGGCGGCC
GAAAAACAGCGACGCCGGTCCGAGGCCATGCTGGCCGAGGCCCGGAGCCG
GAAGGAGCAAGTGGAGGCATGGGCCGCCAGGGAGCGGGCGGCAGTTgaga
aatggcgcgaagacCAACGGGAGTTGGtaggcaaggagaagaaagcttTC
CTCCgggagcaggcggcggcaACGCGCTGTTTGGAAGTGCAACGCGCGTT
GCCGACGCGGGAGGAACGGGTCGAGCGGGAGGCCCTGCTCGCCACCATCG
AGAAGATGAAGCTGGACGCCGAAGGgcaaaggaagagatgggccGCCAAC
AGCAAGCGGCAGGCGGCTCTGATCCAGGAGCAACAAGCCCGTCTGGAGGA
GCTTCAAGGCCAAGTGGAATCGGCGAAGACAGGGACGGCGAGCCCCGGGC
TTCGGTCAGGGATTGGGCCCAGAGGCCAGAACGCGTCGTCCATGTCCGCC
GCAAGGCAGCCGAGGAACTTGCCCCtgccggcctcctccctttccaccgg
TCTCCGGGAGAGCAGGCCTTGCGCCCGTGTGGGCGCAAGGCCTCTGTCCC
ATCCTAcgtccgcttcccccctcagGCTTGAGAAAAAAGCACTCGGGGCT
GGCCATTCTATGGGAGTCCCACCATGCTCTTTTTTGTCTCGGCAGGGTGA
CGGAAAGGcaggagcggaggaagggaccaATGCCGTCCAAGAGGGTAGCT
CCCCCGGGTATCCCACCTCTCCAAGGCCGTACGGCGTTCGCGAGTATACG
GTGacacccccttcttccgcccaAAGCATCATCGGATGCACATCCGACTT
GTCATGGGGCGGAGCAAGGACCTCACCATCGGCAGCCATCATCAGCGAGA
GGCCGCCTCCTTTCGCCCCCCCTTATCATTACTTGCACCAAGGCCAGGAG
CTCTTTCGACGACCGCTACCTGTAGCCAAGCAGGACTCTCAACCTGCTTC
TGGGGCAGAGGACTCTTCATCCTCTGTCCTTACGTccgaaaagaaagcaa
aacaACCCGCCGCGTCAGgtaaagggggaggaggaaaaaccaTCCGCAAG
CTTCCAGACGGCCGGGAGGAGTGGCACTACTCCAACGGCACGGTCAAGGA
GGTGCACCCGAACGGAAAGAGCATCGTACACTTTATGAACGGAGACATCA
AGACTGTCGAGGCGGGAACAGGGGACGTAGTCTACTGGTACGCTGCCAAT
CAGACAAAGCATATCACAGTTGCTGCCTCGGGGTTGGAGATATTTGAGTT
CCCTTCCGGTCAGGTGGAGCGGCACTACCCGAATGGAGTGCGTGAGATCC
AGCCACCTGGTATGGGGGTCATCAATGTGTAA back to top
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