EWM24020.1, cds6667 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24020.1 vs. NCBI_GenBank
Match: gi|585105307|gb|EWM24020.1| (centromere protein j [Nannochloropsis gaditana]) HSP 1 Score: 1813.89 bits (4697), Expect = 0.000e+0 Identity = 893/893 (100.00%), Postives = 893/893 (100.00%), Query Frame = 0
Query: 1 MPFHGTEDPLSPSRGLAHTPPRNKRTPRCAMGNESQPGDNTTPMLGMTAQMKNGQHESPSQSTPRSFLRKGSRREPSAMHRLKSGISPSPSSSSKPIPVTPSSTRKSKPARKRSERSPLALVSQARTRGTTTEAVRATDSKQGTAMEEPLPGRSSYPVPSPTEGYLGEGGGVGEETSWREERESKSTSQEKVEVREHSFDGNATKSFDPYWPPSAAGTAEAPDVMDGREWRMRLFHADSEEEDREGGGWDQEGGRCEDQASFLCSGSEMAAWQARHREEMTEFESLERALAGFPAISLQDGPEPWAANGVQGMGWTAAVDQEGRPAIVGEEAVEEEEEEEEEEEDDDDEEDEEDEMEPGHVGENLTADRGREDGKQRGKFQENRTKSHSNERFCEGNVGLPPPHPSFPSSLDTCLSCGSRRGSLLLKALENKQEEIERELARAEKETKAAEKQRRRSEAMLAEARSRKEQVEAWAARERAAVEKWREDQRELVGKEKKAFLREQAAATRCLEVQRALPTREERVEREALLATIEKMKLDAEGQRKRWAANSKRQAALIQEQQARLEELQGQVESAKTGTASPGLRSGIGPRGQNASSMSAARQPRNLPLPASSLSTGLRESRPCARVGARPLSHPTSASPLRLEKKALGAGHSMGVPPCSFLSRQGDGKAGAEEGTNAVQEGSSPGYPTSPRPYGVREYTVTPPSSAQSIIGCTSDLSWGGARTSPSAAIISERPPPFAPPYHYLHQGQELFRRPLPVAKQDSQPASGAEDSSSSVLTSEKKAKQPAASGKGGGGKTIRKLPDGREEWHYSNGTVKEVHPNGKSIVHFMNGDIKTVEAGTGDVVYWYAANQTKHITVAASGLEIFEFPSGQVERHYPNGVREIQPPGMGVINV 893
MPFHGTEDPLSPSRGLAHTPPRNKRTPRCAMGNESQPGDNTTPMLGMTAQMKNGQHESPSQSTPRSFLRKGSRREPSAMHRLKSGISPSPSSSSKPIPVTPSSTRKSKPARKRSERSPLALVSQARTRGTTTEAVRATDSKQGTAMEEPLPGRSSYPVPSPTEGYLGEGGGVGEETSWREERESKSTSQEKVEVREHSFDGNATKSFDPYWPPSAAGTAEAPDVMDGREWRMRLFHADSEEEDREGGGWDQEGGRCEDQASFLCSGSEMAAWQARHREEMTEFESLERALAGFPAISLQDGPEPWAANGVQGMGWTAAVDQEGRPAIVGEEAVEEEEEEEEEEEDDDDEEDEEDEMEPGHVGENLTADRGREDGKQRGKFQENRTKSHSNERFCEGNVGLPPPHPSFPSSLDTCLSCGSRRGSLLLKALENKQEEIERELARAEKETKAAEKQRRRSEAMLAEARSRKEQVEAWAARERAAVEKWREDQRELVGKEKKAFLREQAAATRCLEVQRALPTREERVEREALLATIEKMKLDAEGQRKRWAANSKRQAALIQEQQARLEELQGQVESAKTGTASPGLRSGIGPRGQNASSMSAARQPRNLPLPASSLSTGLRESRPCARVGARPLSHPTSASPLRLEKKALGAGHSMGVPPCSFLSRQGDGKAGAEEGTNAVQEGSSPGYPTSPRPYGVREYTVTPPSSAQSIIGCTSDLSWGGARTSPSAAIISERPPPFAPPYHYLHQGQELFRRPLPVAKQDSQPASGAEDSSSSVLTSEKKAKQPAASGKGGGGKTIRKLPDGREEWHYSNGTVKEVHPNGKSIVHFMNGDIKTVEAGTGDVVYWYAANQTKHITVAASGLEIFEFPSGQVERHYPNGVREIQPPGMGVINV
Sbjct: 1 MPFHGTEDPLSPSRGLAHTPPRNKRTPRCAMGNESQPGDNTTPMLGMTAQMKNGQHESPSQSTPRSFLRKGSRREPSAMHRLKSGISPSPSSSSKPIPVTPSSTRKSKPARKRSERSPLALVSQARTRGTTTEAVRATDSKQGTAMEEPLPGRSSYPVPSPTEGYLGEGGGVGEETSWREERESKSTSQEKVEVREHSFDGNATKSFDPYWPPSAAGTAEAPDVMDGREWRMRLFHADSEEEDREGGGWDQEGGRCEDQASFLCSGSEMAAWQARHREEMTEFESLERALAGFPAISLQDGPEPWAANGVQGMGWTAAVDQEGRPAIVGEEAVEEEEEEEEEEEDDDDEEDEEDEMEPGHVGENLTADRGREDGKQRGKFQENRTKSHSNERFCEGNVGLPPPHPSFPSSLDTCLSCGSRRGSLLLKALENKQEEIERELARAEKETKAAEKQRRRSEAMLAEARSRKEQVEAWAARERAAVEKWREDQRELVGKEKKAFLREQAAATRCLEVQRALPTREERVEREALLATIEKMKLDAEGQRKRWAANSKRQAALIQEQQARLEELQGQVESAKTGTASPGLRSGIGPRGQNASSMSAARQPRNLPLPASSLSTGLRESRPCARVGARPLSHPTSASPLRLEKKALGAGHSMGVPPCSFLSRQGDGKAGAEEGTNAVQEGSSPGYPTSPRPYGVREYTVTPPSSAQSIIGCTSDLSWGGARTSPSAAIISERPPPFAPPYHYLHQGQELFRRPLPVAKQDSQPASGAEDSSSSVLTSEKKAKQPAASGKGGGGKTIRKLPDGREEWHYSNGTVKEVHPNGKSIVHFMNGDIKTVEAGTGDVVYWYAANQTKHITVAASGLEIFEFPSGQVERHYPNGVREIQPPGMGVINV 893
BLAST of EWM24020.1 vs. NCBI_GenBank
Match: gi|553190732|ref|XP_005855247.1| (t-complex 10a-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293813|gb|EKU21113.1| t-complex 10a-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 509.22 bits (1310), Expect = 9.923e-173 Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0
Query: 650 AGHSMGVPPCSFLSRQGDGKAGAEEGTNAVQEGSSPGYPTSPRPYGVREYTVTPPSSAQSIIGCTSDLSWGGARTSPSAAIISERPPPFAPPYHYLHQGQELFRRPLPVAKQDSQPASGAEDSSSSVLTSEKKAKQPAASGKGGGGKTIRKLPDGREEWHYSNGTVKEVHPNGKSIVHFMNGDIKTVEAGTGDVVYWYAANQTKHITVAASGLEIFEFPSGQVERHYPNGVREIQPPGMGVINV 893
AGHSMGVPPCSFLSRQGDGKAGAEEGTNAVQEGSSPGYPTSPRPYGVREYTVTPPSSAQSIIGCTSDLSWGGARTSPSAAIISERPPPFAPPYHYLHQGQELFRRPLPVAKQDSQPASGAEDSSSSVLTSEKKAKQPAASGKGGGGKTIRKLPDGREEWHYSNGTVKEVHPNGKSIVHFMNGDIKTVEAGTGDVVYWYAANQTKHITVAASGLEIFEFPSGQVERHYPNGVREIQPPGMGVINV
Sbjct: 1 AGHSMGVPPCSFLSRQGDGKAGAEEGTNAVQEGSSPGYPTSPRPYGVREYTVTPPSSAQSIIGCTSDLSWGGARTSPSAAIISERPPPFAPPYHYLHQGQELFRRPLPVAKQDSQPASGAEDSSSSVLTSEKKAKQPAASGKGGGGKTIRKLPDGREEWHYSNGTVKEVHPNGKSIVHFMNGDIKTVEAGTGDVVYWYAANQTKHITVAASGLEIFEFPSGQVERHYPNGVREIQPPGMGVINV 244
BLAST of EWM24020.1 vs. NCBI_GenBank
Match: gi|676384733|ref|XP_009035645.1| (hypothetical protein AURANDRAFT_15226, partial [Aureococcus anophagefferens] >gi|323453720|gb|EGB09591.1| hypothetical protein AURANDRAFT_15226, partial [Aureococcus anophagefferens]) HSP 1 Score: 95.5153 bits (236), Expect = 1.257e-19 Identity = 44/88 (50.00%), Postives = 59/88 (67.05%), Query Frame = 0
Query: 799 RKLPDGREEWHYSNGTVKEVHPNGKSIVHFMNGDIKTVEAGTGDVVYWYAANQTKHITVAASGLEIFEFPSGQVERHYPNGVREIQPP 886
R PDG++E Y NGT K V P+G V F NGD+K+ +A TG VVY+YA+ QT H + +EIFEFP+GQVE+H +G ++I P
Sbjct: 6 RTFPDGKKEVEYKNGTRKAVSPDGAVEVRFANGDVKSADAATGRVVYYYASAQTTHTSDPKRNIEIFEFPNGQVEKHNQDGSKDITFP 93
BLAST of EWM24020.1 vs. NCBI_GenBank
Match: gi|1026967593|ref|XP_016610568.1| (hypothetical protein SPPG_02988 [Spizellomyces punctatus DAOM BR117] >gi|907097000|gb|KND02529.1| hypothetical protein SPPG_02988 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 94.7449 bits (234), Expect = 3.423e-16 Identity = 47/90 (52.22%), Postives = 60/90 (66.67%), Query Frame = 0
Query: 795 GKTIRKLPDGREEWHYSNGTVKEVHPNGKSIV-HFMNGDIKTVEAGTGDVVYWYAANQTKHITVAASGLEIFEFPSGQVERHYPNGVREI 883
GK R +G + YSNGT+KEVHP+ + IV HF NGD KTV A G +VYWY +T H T GL+++EF +GQVE+HYP+G EI
Sbjct: 581 GKLERIYANGIKLVRYSNGTLKEVHPDDELIVIHFTNGDSKTVFAD-GRIVYWYTEQRTLH-TTYKDGLQVYEFSNGQVEKHYPDGTNEI 668
BLAST of EWM24020.1 vs. NCBI_GenBank
Match: gi|514688709|ref|XP_004991930.1| (hypothetical protein PTSG_06547 [Salpingoeca rosetta] >gi|326429903|gb|EGD75473.1| hypothetical protein PTSG_06547 [Salpingoeca rosetta]) HSP 1 Score: 94.3597 bits (233), Expect = 5.498e-16 Identity = 55/119 (46.22%), Postives = 68/119 (57.14%), Query Frame = 0
Query: 768 GAEDSSSSVLTSEKKAKQPAASGKGGGGKTIRKLPDGREEWHYSNGTVKEVHPNGKSIVHFMNGDIKTVEAGTGDVVYWYAANQTKHITVAASGLEIFEFPSGQVERHYPNGVREIQPP 886
G E+++++ TS P + GGGK +R L DG E + NGTVK +G V F NGD K VE G VVY Y QT HIT G E FEF +GQVE+H+ NGV+EIQ P
Sbjct: 987 GGEEATTTTPTS------PEHKRRSGGGKVVRVLEDGSTETTFRNGTVKVTRADGTVSVSFFNGDSKDVEL-DGTVVYRYHEAQTTHIT-KPDGSETFEFANGQVEKHHANGVKEIQFP 1097
BLAST of EWM24020.1 vs. NCBI_GenBank
Match: gi|299470090|emb|CBN79267.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 93.9745 bits (232), Expect = 8.187e-16 Identity = 46/86 (53.49%), Postives = 59/86 (68.60%), Query Frame = 0
Query: 801 LPDGREEWHYSNGTVKEVHPNGKSIVHFMNGDIKTVEAGTGDVVYWYAANQTKHITVAASGLEIFEFPSGQVERHYPNGVREIQPP 886
L DGR ++NGT KE P+G +V F+NGD+K V TG V+Y YAA +T H T+ SGLE+FEFP+GQVERH+ G +EI P
Sbjct: 1549 LRDGRRVILFANGTQKETLPDGGCVVRFVNGDLKRVGGETGVVIYTYAAARTTH-TMHPSGLEVFEFPNGQVERHHKTGEKEIDFP 1633
BLAST of EWM24020.1 vs. NCBI_GenBank
Match: gi|528892368|gb|EPZ32758.1| (T-complex protein 10 domain-containing protein [Rozella allomycis CSF55]) HSP 1 Score: 92.8189 bits (229), Expect = 1.065e-15 Identity = 45/93 (48.39%), Postives = 57/93 (61.29%), Query Frame = 0
Query: 795 GKTIRKLPDGREEWHYSNGTVKEVHPNGKSIVHFMNGDIKTVEAGTGDVVYWYAANQTKHITVAASGLEIFEFPSGQVERHYPNGVREIQPPG 887
GK R L DG Y NGT+K+ N K+++ F N D+K + G G+VVY+Y A +T H T+ SGLEI EF +GQVE YPNG R I P
Sbjct: 454 GKRQRALDDGSLWTFYRNGTLKKDTLN-KTLIFFTNKDVKEINNGNGNVVYYYFATKTIHTTIKDSGLEIIEFRNGQVELLYPNGERHITFPN 545
BLAST of EWM24020.1 vs. NCBI_GenBank
Match: gi|961123410|ref|XP_014783336.1| (PREDICTED: centromere protein J-like [Octopus bimaculoides]) HSP 1 Score: 91.2781 bits (225), Expect = 2.325e-15 Identity = 44/97 (45.36%), Postives = 63/97 (64.95%), Query Frame = 0
Query: 795 GKTIRKLPDGREEWHYSNGTVKEVHPNGKSI-VHFMNGDIKTVEAGTGDVVYWYAANQTKHITVAASGLEIFEFPSGQVERHYPNGVREIQPPGMGV 890
GKT + +G E +SNGT KE+ +GK I +HF NGDIK + A V+Y+YA ++T +T GLE+ EFP+GQ+E+H+PNG ++I P V
Sbjct: 377 GKTEKVYQNGARELIFSNGTRKEMSADGKHIALHFFNGDIKQITADQT-VIYFYAESETL-VTTYPDGLEVLEFPTGQIEKHFPNGTQQITFPDQTV 471
BLAST of EWM24020.1 vs. NCBI_GenBank
Match: gi|938058393|gb|KPP62011.1| (centromere protein J-like [Scleropages formosus]) HSP 1 Score: 90.8929 bits (224), Expect = 5.811e-15 Identity = 47/103 (45.63%), Postives = 63/103 (61.17%), Query Frame = 0
Query: 801 LPDGREEWHY---------SNGTVKEVHPNGKSI-VHFMNGDIKTVEAGTGDVVYWYAANQTKHITVAASGLEIFEFPSGQVERHYPNGVREIQPPGMGVINV 893
PDG+ EW + +NGT KE+ +GKSI + F NGD+K V A VY+YA QT HIT SGLE+ +FP+ Q+E+H+PNG REI P V ++
Sbjct: 645 YPDGKTEWMFASGRRIVAFTNGTKKEISADGKSITIRFFNGDVKCVLADE-KAVYYYANTQTTHITYP-SGLEVLKFPNKQIEKHHPNGTREIIFPDGTVKHI 745
BLAST of EWM24020.1 vs. NCBI_GenBank
Match: gi|918297432|gb|KOF73036.1| (hypothetical protein OCBIM_22038496mg [Octopus bimaculoides]) HSP 1 Score: 88.1965 bits (217), Expect = 8.176e-15 Identity = 44/97 (45.36%), Postives = 63/97 (64.95%), Query Frame = 0
Query: 795 GKTIRKLPDGREEWHYSNGTVKEVHPNGKSI-VHFMNGDIKTVEAGTGDVVYWYAANQTKHITVAASGLEIFEFPSGQVERHYPNGVREIQPPGMGV 890
GKT + +G E +SNGT KE+ +GK I +HF NGDIK + A V+Y+YA ++T +T GLE+ EFP+GQ+E+H+PNG ++I P V
Sbjct: 225 GKTEKVYQNGARELIFSNGTRKEMSADGKHIALHFFNGDIKQITADQT-VIYFYAESETL-VTTYPDGLEVLEFPTGQIEKHFPNGTQQITFPDQTV 319 The following BLAST results are available for this feature:
BLAST of EWM24020.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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