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Properties
| Property Name | Value |
|---|
| Product | clusterin-associated protein 1 |
| Orig transcript id | gnl|cribi|Naga_100040g23.2023.mrna |
| Orig protein id | gnl|cribi|Naga_100040g23.2023 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:228505..229811 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6674 ID=rna6674|Name=rna6674|organism=Nannochloropsis gaditana|type=mRNA|length=735bp
ATGCACCCTTTCATTAGCAAAGGAGAAGTCTCAACGACAGCAATAATCAT
GGAGGAGAAAAGAGACGCTTTAAGCGTTAAGCAACAAGTGGTGGACTTGG
CTGTGGCCGAAGGCGTGCGTGCTGCCGTGGGAGCGGGCTGTCTATCGGGA
TTAGGCGTCTTTGCTGCGCATAAATACAGCCCCTGGTTTAACAAGTCGTT
GGGCATTTCTGGGAAAGTGGGCACGGTCATGATTGCCATCACAGGAAGCT
TCTTCTTGTTCAGCGAACTGGTTTTGATTGATGCGCAACGCCATCCCCAA
GCCTACGGCTTCATGGACACACCTGCTTTGACGGCTGCTCCCACTGATGC
GGCAAAGCCCGACGCGGAGAAGAGAGAAAAAGATGAGGGCCTGGGGATGA
TCCACATCAAGCCGCGGTACGTGTACGCAACGGTGGCGAATCACCTGTAC
GACCATCCGTTCCAAATGCTCGTCGCGCTAAGCACCCCTATAATCGGGGG
GTTTTTCTACACGGAGATGCAGAAACCGGGCTTGAAGTTGTCGCAGCGCA
TCATTCACACACGCGTGCAAGGTCAGGCCTCCGTGATCCTGATCCTAGCA
CTGACCATGGGCTTCAGGGACCAATGTGTCCGCCTTGAGCTATACTTCTG
TGGGACAAAAGGCAGCATTGGGAGAGAGGTTGTACAGAACGAGGCGAAAG
ACAGCTATATACAAGGGCGAACAAGCAATATATAG back to topprotein sequence of rna6674 >rna6674-protein ID=rna6674-protein|Name=rna6674|organism=Nannochloropsis gaditana|type=polypeptide|length=306bp
MTTLTSTEDVPSLRRTLESLQRQHAALDAEERMLELKVEEKKGELKRSEA
RLQSLQSVRPSLVEEHNMLEKELARQYDEYVRLYQNLDFLEQEVDSLRSA
ELAKQSRAERRIRCVQRRVQVEEERRQELVAGGGGPGKQEGGGGGKRGSR
AMSDGDGRRRMKASERGAIKGYGKEAMEGQLFVMDYGDEVITDTKALNNV
MDVKTSRGRRTSVSQPSPPTSTSSASPSMEHLKQYGHPPPLANRKFSTAS
SILEMGAKRSSPSSLGEGEEEDDDFSFLPGEEKEDGTEDIRDEDMEAVHE
ADDDNF back to topmRNA from alignment at CM002469.1:228505..229811- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6674 ID=rna6674|Name=rna6674|organism=Nannochloropsis gaditana|type=mRNA|length=1307bp|location=Sequence derived from alignment at CM002469.1:228505..229811- (Nannochloropsis gaditana)
ATGACCACTTTGACAAGTACAGAAGACGTGCCATCTCTCCGCCGCACACT
TGAATCGTTGCAACGGCAGCATGCTGCACTGGATGCAGAGGAGCGAATGC
TGGAGCTGAAGGTAAGTACACATAGCATCTCGTGGTTTTCATGATGGCAT
TATATGTTAACTTTTAGCTTTGCCGTACACAGGTCGAGGAAAAGAAAGGC
GAACTCAAACGCAGCGAGGCCCGTCTTCAAAGTTTACAGAGTGTACGGTA
CGTGTTTCAATTGGATCAAGAAATTGGCATGAGATGGCAGCATGAGCCGC
AATCAGGGGTACTTTCCCACGAATATGAAGCCGAAAATATAATTACACAC
GGCTAACCCGGCGAACGCTTTCTTACTGAGACATGTCGACATCATATGTT
CTCAGGCCATCTTTGGTAGAAGAACACAACATGTTGGAAAAAGAGCTTGC
ACGGCAGTATGACGAGTACGTGCGGCTATACCAGAATTTGGACTTTCTTG
AGCAAGAAGTCGACTCTCTCCGCTCGGCAGAGCTTGCGAAACAGTCCCGT
GCGGAGCGACGCATACGATGCGTGCAACGACGGGTGCAAGTAGAGGAGGA
GCGGCGGCAGGAATTGGTAGCTGGAGGTGGAGGCCCGGGGAAGCAAGAGG
GAGGAGGAGGGGGAAAAAGAGGAAGCAGGGCAATGTCAGACGGAGATGGA
AGGAGAAGAATGAAAGCAAGCGAAAGGGGAGCAATTAAAGGATATGGGAA
GGAAGCAATGGAGGGTCAGCTTTTTGTCATGGTAAGTCGTGTACCACTTT
GTAAGCCAGGAAATAGAGGCAATAAAGAGGAAAGCAACCCGCCCTCAACA
TGACATTGGGGCACCCACAGGACTACGGGGACGAAGTCATCACTGATACG
AAGGCTTTGAACAATGTGATGGATGTGAAAACGAGCAGAGGAAGGTAAGT
CATTTGTGACGATGCACGTGTCTCGTTCAGACGGCTCACTGCTTTTCCAC
TCGTGCTCTTAGAAGGACATCCGTATCGCAGCCATCGCCACCCACATCAA
CATCTTCGGCTTCTCCGTCGATGGAGCACTTAAAACAGTATGGCCATCCA
CCTCCATTGGCAAATCGGAAATTCTCGACCGCATCTTCCATTTTGGAAAT
GGGTGCAAAGCGTTCTTCTCCTTCCTCGCTGGGAGAGGGAGAGGAGGAAG
ATGATGATTTCTCGTTCTTGCCGGGTGAGGAGAAAGAGGACGGTACCGAA
GATATCCGTGATGAAGACATGGAAGCTGTACACGAAGCAGATGACGACAA
CTTTTAA back to topCoding sequence (CDS) from alignment at CM002469.1:228505..229811- >rna6674 ID=rna6674|Name=rna6674|organism=Nannochloropsis gaditana|type=CDS|length=4605bp|location=Sequence derived from alignment at CM002469.1:228505..229811- (Nannochloropsis gaditana)
AAGGACATCCGTATCGCAGCCATCGCCACCCACATCAACATCTTCGGCTT
CTCCGTCGATGGAGCACTTAAAACAGTATGGCCATCCACCTCCATTGGCA
AATCGGAAATTCTCGACCGCATCTTCCATTTTGGAAATGGGTGCAAAGCG
TTCTTCTCCTTCCTCGCTGGGAGAGGGAGAGGAGGAAGATGATGATTTCT
CGTTCTTGCCGGGTGAGGAGAAAGAGGACGGTACCGAAGATATCCGTGAT
GAAGACATGGAAGCTGTACACGAAGCAGATGACGACAACTTTTAAGACTA
CGGGGACGAAGTCATCACTGATACGAAGGCTTTGAACAATGTGATGGATG
TGAAAACGAGCAGAGGAAGGCCATCTTTGGTAGAAGAACACAACATGTTG
GAAAAAGAGCTTGCACGGCAGTATGACGAGTACGTGCGGCTATACCAGAA
TTTGGACTTTCTTGAGCAAGAAGTCGACTCTCTCCGCTCGGCAGAGCTTG
CGAAACAGTCCCGTGCGGAGCGACGCATACGATGCGTGCAACGACGGGTG
CAAGTAGAGGAGGAGCGGCGGCAGGAATTGGTAGCTGGAGGTGGAGGCCC
GGGGAAGCAAGAGGGAGGAGGAGGGGGAAAAAGAGGAAGCAGGGCAATGT
CAGACGGAGATGGAAGGAGAAGAATGAAAGCAAGCGAAAGGGGAGCAATT
AAAGGATATGGGAAGGAAGCAATGGAGGGTCAGCTTTTTGTCATGGTCGA
GGAAAAGAAAGGCGAACTCAAACGCAGCGAGGCCCGTCTTCAAAGTTTAC
AGAGTGTACGATGACCACTTTGACAAGTACAGAAGACGTGCCATCTCTCC
GCCGCACACTTGAATCGTTGCAACGGCAGCATGCTGCACTGGATGCAGAG
GAGCGAATGCTGGAGCTGAAGAAGGACATCCGTATCGCAGCCATCGCCAC
CCACATCAACATCTTCGGCTTCTCCGTCGATGGAGCACTTAAAACAGTAT
GGCCATCCACCTCCATTGGCAAATCGGAAATTCTCGACCGCATCTTCCAT
TTTGGAAATGGGTGCAAAGCGTTCTTCTCCTTCCTCGCTGGGAGAGGGAG
AGGAGGAAGATGATGATTTCTCGTTCTTGCCGGGTGAGGAGAAAGAGGAC
GGTACCGAAGATATCCGTGATGAAGACATGGAAGCTGTACACGAAGCAGA
TGACGACAACTTTTAAGACTACGGGGACGAAGTCATCACTGATACGAAGG
CTTTGAACAATGTGATGGATGTGAAAACGAGCAGAGGAAGGCCATCTTTG
GTAGAAGAACACAACATGTTGGAAAAAGAGCTTGCACGGCAGTATGACGA
GTACGTGCGGCTATACCAGAATTTGGACTTTCTTGAGCAAGAAGTCGACT
CTCTCCGCTCGGCAGAGCTTGCGAAACAGTCCCGTGCGGAGCGACGCATA
CGATGCGTGCAACGACGGGTGCAAGTAGAGGAGGAGCGGCGGCAGGAATT
GGTAGCTGGAGGTGGAGGCCCGGGGAAGCAAGAGGGAGGAGGAGGGGGAA
AAAGAGGAAGCAGGGCAATGTCAGACGGAGATGGAAGGAGAAGAATGAAA
GCAAGCGAAAGGGGAGCAATTAAAGGATATGGGAAGGAAGCAATGGAGGG
TCAGCTTTTTGTCATGGTCGAGGAAAAGAAAGGCGAACTCAAACGCAGCG
AGGCCCGTCTTCAAAGTTTACAGAGTGTACGATGACCACTTTGACAAGTA
CAGAAGACGTGCCATCTCTCCGCCGCACACTTGAATCGTTGCAACGGCAG
CATGCTGCACTGGATGCAGAGGAGCGAATGCTGGAGCTGAAGAAGGACAT
CCGTATCGCAGCCATCGCCACCCACATCAACATCTTCGGCTTCTCCGTCG
ATGGAGCACTTAAAACAGTATGGCCATCCACCTCCATTGGCAAATCGGAA
ATTCTCGACCGCATCTTCCATTTTGGAAATGGGTGCAAAGCGTTCTTCTC
CTTCCTCGCTGGGAGAGGGAGAGGAGGAAGATGATGATTTCTCGTTCTTG
CCGGGTGAGGAGAAAGAGGACGGTACCGAAGATATCCGTGATGAAGACAT
GGAAGCTGTACACGAAGCAGATGACGACAACTTTTAAGACTACGGGGACG
AAGTCATCACTGATACGAAGGCTTTGAACAATGTGATGGATGTGAAAACG
AGCAGAGGAAGGCCATCTTTGGTAGAAGAACACAACATGTTGGAAAAAGA
GCTTGCACGGCAGTATGACGAGTACGTGCGGCTATACCAGAATTTGGACT
TTCTTGAGCAAGAAGTCGACTCTCTCCGCTCGGCAGAGCTTGCGAAACAG
TCCCGTGCGGAGCGACGCATACGATGCGTGCAACGACGGGTGCAAGTAGA
GGAGGAGCGGCGGCAGGAATTGGTAGCTGGAGGTGGAGGCCCGGGGAAGC
AAGAGGGAGGAGGAGGGGGAAAAAGAGGAAGCAGGGCAATGTCAGACGGA
GATGGAAGGAGAAGAATGAAAGCAAGCGAAAGGGGAGCAATTAAAGGATA
TGGGAAGGAAGCAATGGAGGGTCAGCTTTTTGTCATGGTCGAGGAAAAGA
AAGGCGAACTCAAACGCAGCGAGGCCCGTCTTCAAAGTTTACAGAGTGTA
CGATGACCACTTTGACAAGTACAGAAGACGTGCCATCTCTCCGCCGCACA
CTTGAATCGTTGCAACGGCAGCATGCTGCACTGGATGCAGAGGAGCGAAT
GCTGGAGCTGAAGAAGGACATCCGTATCGCAGCCATCGCCACCCACATCA
ACATCTTCGGCTTCTCCGTCGATGGAGCACTTAAAACAGTATGGCCATCC
ACCTCCATTGGCAAATCGGAAATTCTCGACCGCATCTTCCATTTTGGAAA
TGGGTGCAAAGCGTTCTTCTCCTTCCTCGCTGGGAGAGGGAGAGGAGGAA
GATGATGATTTCTCGTTCTTGCCGGGTGAGGAGAAAGAGGACGGTACCGA
AGATATCCGTGATGAAGACATGGAAGCTGTACACGAAGCAGATGACGACA
ACTTTTAAGACTACGGGGACGAAGTCATCACTGATACGAAGGCTTTGAAC
AATGTGATGGATGTGAAAACGAGCAGAGGAAGGCCATCTTTGGTAGAAGA
ACACAACATGTTGGAAAAAGAGCTTGCACGGCAGTATGACGAGTACGTGC
GGCTATACCAGAATTTGGACTTTCTTGAGCAAGAAGTCGACTCTCTCCGC
TCGGCAGAGCTTGCGAAACAGTCCCGTGCGGAGCGACGCATACGATGCGT
GCAACGACGGGTGCAAGTAGAGGAGGAGCGGCGGCAGGAATTGGTAGCTG
GAGGTGGAGGCCCGGGGAAGCAAGAGGGAGGAGGAGGGGGAAAAAGAGGA
AGCAGGGCAATGTCAGACGGAGATGGAAGGAGAAGAATGAAAGCAAGCGA
AAGGGGAGCAATTAAAGGATATGGGAAGGAAGCAATGGAGGGTCAGCTTT
TTGTCATGGTCGAGGAAAAGAAAGGCGAACTCAAACGCAGCGAGGCCCGT
CTTCAAAGTTTACAGAGTGTACGATGACCACTTTGACAAGTACAGAAGAC
GTGCCATCTCTCCGCCGCACACTTGAATCGTTGCAACGGCAGCATGCTGC
ACTGGATGCAGAGGAGCGAATGCTGGAGCTGAAGAAGGACATCCGTATCG
CAGCCATCGCCACCCACATCAACATCTTCGGCTTCTCCGTCGATGGAGCA
CTTAAAACAGTATGGCCATCCACCTCCATTGGCAAATCGGAAATTCTCGA
CCGCATCTTCCATTTTGGAAATGGGTGCAAAGCGTTCTTCTCCTTCCTCG
CTGGGAGAGGGAGAGGAGGAAGATGATGATTTCTCGTTCTTGCCGGGTGA
GGAGAAAGAGGACGGTACCGAAGATATCCGTGATGAAGACATGGAAGCTG
TACACGAAGCAGATGACGACAACTTTTAAGACTACGGGGACGAAGTCATC
ACTGATACGAAGGCTTTGAACAATGTGATGGATGTGAAAACGAGCAGAGG
AAGGCCATCTTTGGTAGAAGAACACAACATGTTGGAAAAAGAGCTTGCAC
GGCAGTATGACGAGTACGTGCGGCTATACCAGAATTTGGACTTTCTTGAG
CAAGAAGTCGACTCTCTCCGCTCGGCAGAGCTTGCGAAACAGTCCCGTGC
GGAGCGACGCATACGATGCGTGCAACGACGGGTGCAAGTAGAGGAGGAGC
GGCGGCAGGAATTGGTAGCTGGAGGTGGAGGCCCGGGGAAGCAAGAGGGA
GGAGGAGGGGGAAAAAGAGGAAGCAGGGCAATGTCAGACGGAGATGGAAG
GAGAAGAATGAAAGCAAGCGAAAGGGGAGCAATTAAAGGATATGGGAAGG
AAGCAATGGAGGGTCAGCTTTTTGTCATGGTCGAGGAAAAGAAAGGCGAA
CTCAAACGCAGCGAGGCCCGTCTTCAAAGTTTACAGAGTGTACGATGACC
ACTTTGACAAGTACAGAAGACGTGCCATCTCTCCGCCGCACACTTGAATC
GTTGCAACGGCAGCATGCTGCACTGGATGCAGAGGAGCGAATGCTGGAGC
TGAAG back to top
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