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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100040g22.2011.mrna |
| Orig protein id | gnl|cribi|Naga_100040g22.2011 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:226481..228399 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6673 ID=rna6673|Name=rna6673|organism=Nannochloropsis gaditana|type=mRNA|length=1524bp
GGCCGAGGAGACGCACGCACAATCCCTCATTATGACTCTGGCTGGTTTTC
TCGTCGATGGAGCAGCACAAGATCGTCTAGGATAAATGCAACCTACTCGA
TGTCTGCCTGCCTCCTCTTTATACCTTACCCCGATGATAACGTGTACATG
ACGGAGCAAAGGAGCACTCTCAATTACCTTCGCGCCGGGGTTACCCGCTC
GTTGAAGGCGCTTGAGAAAAAGATACACACATGCGTGTCTCCAGGGCACC
CTGTGCGGAGAGCCACCCTAGAGCTGAAAGCTTACCCTCATGAAATCTTA
TTCTTCTCATTGTGCAGGGTAGGAGTCATGCGGACGATATCGACGCTCGT
AGCGTTGTCTGCCATCGTTGGTTGCAGCGCATTTTTGGCCCCGATGCCAG
CGCCCCGGCAGCTTACTCGCGTCCATGCCGGCGCCTCTGCCGGAGGAGAC
GATGACTGGAAGAATATCATCAACTCTGAGGCTAATCTTGCAAGCTATCT
TAGCGAGGAGGGGTTCCGATACTGCTTAAACAAGACACCTGAGGAACTGG
AGAAGGAGGGTGACTACAATATTTTCGAGAAGATGTTCGGTGCCACAAGC
AACAACGCCGCACGCATGGCTGCCCGCTCCTTCGGAAGATCTTTGACAAT
TGACGCATACGACGCGAAGAAAGCGGCCGAAAATAAGGAGTGGGTTGCCA
AGTACGGATACAAACGATGGGTTACCAGCTACGTTGACAAGTCCGACCTG
GAGACGGAGAAAGGCGCCGCGCCCGCTGCCGTGGCAGCTTCTGCCAAGAA
AGCGGCTCCTCCTGCACAACCGCGCAAACCGGCCTTCTCTTTTCCCAAAT
TTGGAGGCCAGGTGGCAGCAAGCACCCCCGGTCCCGCCAAGAAGAGTAGC
CCGGTTAAGGTGACAGCAGCAGCCAAGCCGGCCGCTGCCAAGCCGGCACC
AACTCCCAAAGCGGCGGCCCCTAAGGCCAAAGCTGCAGCCCCCACCGGTC
CGTTGAGCGGCAAGCCCCAGGCACAGGGAAAGGGCAACCTCAACTTGTTG
AAGAAGAAGTGAGCGACGGCGAATGACTCGGCGGGGGATAAAATAGGCGA
AGAGGGCATATGCATGAATGACGGTAGCTGGTCGGTGGATGAGAGAGAAA
GGCAAACCGGAACAGAAGAAAATCTGGAAAGTGCCTTGTCTCGCGGTAGG
ATGACACCTCTGTAAAGAGGCGCCCGCCGCGAGCGGGACATCCCCATCCG
CTCTCGGGAGTGTCCGTAGGGAAGGGTAAGGCGGCAGCGTAAGCGCGATG
CTGGAGCAGAAAAATAGACGCCCAGCGCTTTTCGGGACACATAGGGGTCT
TATGACGTCGCAGACAGGGAGAGACGTGGAGAGAGCCAGAGTGAGGACAC
TGACGACGATGAAGATACCGACATATAATGATCATACATCAAAAACATGT
TTGTTTACCTTTTTCGTTCTTTTGTGGTTCGATCAATCAATAAATCATGG
AATTAAAAACCAGTCCTTCTTCTC back to topprotein sequence of rna6673 >rna6673-protein ID=rna6673-protein|Name=rna6673|organism=Nannochloropsis gaditana|type=polypeptide|length=244bp
MHPFISKGEVSTTAIIMEEKRDALSVKQQVVDLAVAEGVRAAVGAGCLSG
LGVFAAHKYSPWFNKSLGISGKVGTVMIAITGSFFLFSELVLIDAQRHPQ
AYGFMDTPALTAAPTDAAKPDAEKREKDEGLGMIHIKPRYVYATVANHLY
DHPFQMLVALSTPIIGGFFYTEMQKPGLKLSQRIIHTRVQGQASVILILA
LTMGFRDQCVRLELYFCGTKGSIGREVVQNEAKDSYIQGRTSNI back to topmRNA from alignment at CM002469.1:226481..228399- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6673 ID=rna6673|Name=rna6673|organism=Nannochloropsis gaditana|type=mRNA|length=1919bp|location=Sequence derived from alignment at CM002469.1:226481..228399- (Nannochloropsis gaditana)
ATGCACCCTTTCATTAGCGTCAAAATGGGCAATGCTTTCCGATAAAAGAT
CTGCACCTAGCAGTACTGGTGTTGCGCGAGACTCACGCAGGATGGGCCAT
CAGTGCGGGGGCAGGCCCTTCGACCATCTCCTCCGAACGCACCATGAAGG
CGGCAATTCGCGGGATTACTGCCCACTACATAGAAAGGAGAAGTAAGTGA
GCGACATGCGTGCGCAAATATGTCGTTTGTGGGTTAAAGGGAAGGGAGGT
ACCCGCCAAGGTGGGCTGGACGGCTCGAATCGGCGACAGGCGCTCGTCGA
CTCGGAGGAACCAGCTGGGTCCATGTGCGGCCTATGTCCCTTTACGGCGG
GTTTATGGGGGCGATCACGGAGTACGCATGGGTAAATGATGCCGAGCTTA
CAGCAGTGCAATCTTCTGAGTGATCGACCAAAGTTGAGCCGCGTGCATTT
AAAGACGAGTTTTTAAGTGGTAAAACAACCCCGGGCAAGATCTCGCTCCG
AGACGGATCAATTTCCTACAGCGCCTTTGCATGGTACACGTACTCCACAA
CTCTAATTTTCGCAACTACGCGGAACAGGTCTCAACGACAGCAATAATCA
TGGAGGAGAAAAGAGACGCTTTAAGCGTTAAGCAACAAGTGGTGGACTTG
GCTGTGGCCGAAGGTATGAATATGAAGCCCTCGTCTCCGACCTCCTAGCG
TCTGACGACATGGGAGCCGCATTCGAAGTGTCTTTTGCCCGTGTCCCCTC
CTGTCTTCCCCTCCCTCGCATTTTCGTCCCTCTCAACATATGACACACTA
TCTCATGATTTCAGGCGTGCGTGCTGCCGTGGGAGCGGGCTGTCTATCGG
GATTAGGCGTCTTTGCTGCGCATAAATACAGCCCCTGGTAATGCGCTGTG
CCTCCACGGCTCCCCAAGCGCCCTCCCATTCTCATGCTGGTTTTCCTCCA
TCTTGTATACAATTAGGTTTAACAAGTCGTTGGGCATTTCTGGGAAAGTG
GGCACGGTCATGATTGCCATCACAGGAAGCTTCTTCTTGTTCAGCGAACT
GGTAGGGGCTAAGAGGTTTGTGGAGATCAGACAGCCAGTAGTGCGCGTTT
CAATACCATCGCTACTAGAGGCATGATGGACGCCTTGACTGACAACATGT
ATTGCTTCTGTCCCACCCGTTTCAACGCAACCCGCTCGCATGCCTCTCTA
GGTTTTGATTGATGCGCAACGCCATCCCCAAGCCTACGGCTTCATGGACA
CACCTGCTTTGACGGCTGCTCCCACTGATGCGGCAAAGCCCGACGCGGAG
AAGAGAGAAAAAGATGAGGGCCTGGGGATGATCCACATCAAGCCGCGGTA
CGTGTACGCAACGGTGGCGAATCACCTGTACGACCATCCGTTCCAAATGC
TCGTCGCGCTAAGCACCCCTATAATCGGGGGGTTTTTCTACACGGAGATG
CAGAAACCGGGTAAGATAGGGATTACGGAGGTGTGCCACACGACTGATGA
GATGGATGCGTGGTTGAGCTGCTGTTGGGAGTGATTTGTCTGTCGCCGGG
CCCTCGGTCAAAAATCCTCGGAAGTGTCTTTATCTTTAAACATTGCGGGG
AAACATTGCTAAAATTGCTCGTGTGATTTCGACATTTCATGAATTCTATC
ATCCAGGCTTGAAGTTGTCGCAGCGCATCATTCACACACGCGTGCAAGGT
CAGGCCTCCGTGATCCTGATCCTAGCACTGACCATGGGCTTCAGGGAGTG
GATGACAAAGAACGGAGGCCGCATTCCCTTAGATGAAGATGACGCTTAAG
TAAGCCAATGTGTCCGCCTTGAGCTATACTTCTGTGGGACAAAAGGCAGC
ATTGGGAGAGAGGTTGTACAGAACGAGGCGAAAGACAGCTATATACAAGG
GCGAACAAGCAATATATAG back to topCoding sequence (CDS) from alignment at CM002469.1:226481..228399- >rna6673 ID=rna6673|Name=rna6673|organism=Nannochloropsis gaditana|type=CDS|length=5880bp|location=Sequence derived from alignment at CM002469.1:226481..228399- (Nannochloropsis gaditana)
CCAATGTGTCCGCCTTGAGCTATACTTCTGTGGGACAAAAGGCAGCATTG
GGAGAGAGGTTGTACAGAACGAGGCGAAAGACAGCTATATACAAGGGCGA
ACAAGCAATATATAGGCTTGAAGTTGTCGCAGCGCATCATTCACACACGC
GTGCAAGGTCAGGCCTCCGTGATCCTGATCCTAGCACTGACCATGGGCTT
CAGGGAGTTTTGATTGATGCGCAACGCCATCCCCAAGCCTACGGCTTCAT
GGACACACCTGCTTTGACGGCTGCTCCCACTGATGCGGCAAAGCCCGACG
CGGAGAAGAGAGAAAAAGATGAGGGCCTGGGGATGATCCACATCAAGCCG
CGGTACGTGTACGCAACGGTGGCGAATCACCTGTACGACCATCCGTTCCA
AATGCTCGTCGCGCTAAGCACCCCTATAATCGGGGGGTTTTTCTACACGG
AGATGCAGAAACCGGGTTTAACAAGTCGTTGGGCATTTCTGGGAAAGTGG
GCACGGTCATGATTGCCATCACAGGAAGCTTCTTCTTGTTCAGCGAACTG
GCGTGCGTGCTGCCGTGGGAGCGGGCTGTCTATCGGGATTAGGCGTCTTT
GCTGCGCATAAATACAGCCCCTGGTCTCAACGACAGCAATAATCATGGAG
GAGAAAAGAGACGCTTTAAGCGTTAAGCAACAAGTGGTGGACTTGGCTGT
GGCCGAAGAAAGGAGAAATGCACCCTTTCATTAGCCCAATGTGTCCGCCT
TGAGCTATACTTCTGTGGGACAAAAGGCAGCATTGGGAGAGAGGTTGTAC
AGAACGAGGCGAAAGACAGCTATATACAAGGGCGAACAAGCAATATATAG
GCTTGAAGTTGTCGCAGCGCATCATTCACACACGCGTGCAAGGTCAGGCC
TCCGTGATCCTGATCCTAGCACTGACCATGGGCTTCAGGGAGTTTTGATT
GATGCGCAACGCCATCCCCAAGCCTACGGCTTCATGGACACACCTGCTTT
GACGGCTGCTCCCACTGATGCGGCAAAGCCCGACGCGGAGAAGAGAGAAA
AAGATGAGGGCCTGGGGATGATCCACATCAAGCCGCGGTACGTGTACGCA
ACGGTGGCGAATCACCTGTACGACCATCCGTTCCAAATGCTCGTCGCGCT
AAGCACCCCTATAATCGGGGGGTTTTTCTACACGGAGATGCAGAAACCGG
GTTTAACAAGTCGTTGGGCATTTCTGGGAAAGTGGGCACGGTCATGATTG
CCATCACAGGAAGCTTCTTCTTGTTCAGCGAACTGGCGTGCGTGCTGCCG
TGGGAGCGGGCTGTCTATCGGGATTAGGCGTCTTTGCTGCGCATAAATAC
AGCCCCTGGTCTCAACGACAGCAATAATCATGGAGGAGAAAAGAGACGCT
TTAAGCGTTAAGCAACAAGTGGTGGACTTGGCTGTGGCCGAAGAAAGGAG
AAATGCACCCTTTCATTAGCCCAATGTGTCCGCCTTGAGCTATACTTCTG
TGGGACAAAAGGCAGCATTGGGAGAGAGGTTGTACAGAACGAGGCGAAAG
ACAGCTATATACAAGGGCGAACAAGCAATATATAGGCTTGAAGTTGTCGC
AGCGCATCATTCACACACGCGTGCAAGGTCAGGCCTCCGTGATCCTGATC
CTAGCACTGACCATGGGCTTCAGGGAGTTTTGATTGATGCGCAACGCCAT
CCCCAAGCCTACGGCTTCATGGACACACCTGCTTTGACGGCTGCTCCCAC
TGATGCGGCAAAGCCCGACGCGGAGAAGAGAGAAAAAGATGAGGGCCTGG
GGATGATCCACATCAAGCCGCGGTACGTGTACGCAACGGTGGCGAATCAC
CTGTACGACCATCCGTTCCAAATGCTCGTCGCGCTAAGCACCCCTATAAT
CGGGGGGTTTTTCTACACGGAGATGCAGAAACCGGGTTTAACAAGTCGTT
GGGCATTTCTGGGAAAGTGGGCACGGTCATGATTGCCATCACAGGAAGCT
TCTTCTTGTTCAGCGAACTGGCGTGCGTGCTGCCGTGGGAGCGGGCTGTC
TATCGGGATTAGGCGTCTTTGCTGCGCATAAATACAGCCCCTGGTCTCAA
CGACAGCAATAATCATGGAGGAGAAAAGAGACGCTTTAAGCGTTAAGCAA
CAAGTGGTGGACTTGGCTGTGGCCGAAGAAAGGAGAAATGCACCCTTTCA
TTAGCCCAATGTGTCCGCCTTGAGCTATACTTCTGTGGGACAAAAGGCAG
CATTGGGAGAGAGGTTGTACAGAACGAGGCGAAAGACAGCTATATACAAG
GGCGAACAAGCAATATATAGGCTTGAAGTTGTCGCAGCGCATCATTCACA
CACGCGTGCAAGGTCAGGCCTCCGTGATCCTGATCCTAGCACTGACCATG
GGCTTCAGGGAGTTTTGATTGATGCGCAACGCCATCCCCAAGCCTACGGC
TTCATGGACACACCTGCTTTGACGGCTGCTCCCACTGATGCGGCAAAGCC
CGACGCGGAGAAGAGAGAAAAAGATGAGGGCCTGGGGATGATCCACATCA
AGCCGCGGTACGTGTACGCAACGGTGGCGAATCACCTGTACGACCATCCG
TTCCAAATGCTCGTCGCGCTAAGCACCCCTATAATCGGGGGGTTTTTCTA
CACGGAGATGCAGAAACCGGGTTTAACAAGTCGTTGGGCATTTCTGGGAA
AGTGGGCACGGTCATGATTGCCATCACAGGAAGCTTCTTCTTGTTCAGCG
AACTGGCGTGCGTGCTGCCGTGGGAGCGGGCTGTCTATCGGGATTAGGCG
TCTTTGCTGCGCATAAATACAGCCCCTGGTCTCAACGACAGCAATAATCA
TGGAGGAGAAAAGAGACGCTTTAAGCGTTAAGCAACAAGTGGTGGACTTG
GCTGTGGCCGAAGAAAGGAGAAATGCACCCTTTCATTAGCCCAATGTGTC
CGCCTTGAGCTATACTTCTGTGGGACAAAAGGCAGCATTGGGAGAGAGGT
TGTACAGAACGAGGCGAAAGACAGCTATATACAAGGGCGAACAAGCAATA
TATAGGCTTGAAGTTGTCGCAGCGCATCATTCACACACGCGTGCAAGGTC
AGGCCTCCGTGATCCTGATCCTAGCACTGACCATGGGCTTCAGGGAGTTT
TGATTGATGCGCAACGCCATCCCCAAGCCTACGGCTTCATGGACACACCT
GCTTTGACGGCTGCTCCCACTGATGCGGCAAAGCCCGACGCGGAGAAGAG
AGAAAAAGATGAGGGCCTGGGGATGATCCACATCAAGCCGCGGTACGTGT
ACGCAACGGTGGCGAATCACCTGTACGACCATCCGTTCCAAATGCTCGTC
GCGCTAAGCACCCCTATAATCGGGGGGTTTTTCTACACGGAGATGCAGAA
ACCGGGTTTAACAAGTCGTTGGGCATTTCTGGGAAAGTGGGCACGGTCAT
GATTGCCATCACAGGAAGCTTCTTCTTGTTCAGCGAACTGGCGTGCGTGC
TGCCGTGGGAGCGGGCTGTCTATCGGGATTAGGCGTCTTTGCTGCGCATA
AATACAGCCCCTGGTCTCAACGACAGCAATAATCATGGAGGAGAAAAGAG
ACGCTTTAAGCGTTAAGCAACAAGTGGTGGACTTGGCTGTGGCCGAAGAA
AGGAGAAATGCACCCTTTCATTAGCCCAATGTGTCCGCCTTGAGCTATAC
TTCTGTGGGACAAAAGGCAGCATTGGGAGAGAGGTTGTACAGAACGAGGC
GAAAGACAGCTATATACAAGGGCGAACAAGCAATATATAGGCTTGAAGTT
GTCGCAGCGCATCATTCACACACGCGTGCAAGGTCAGGCCTCCGTGATCC
TGATCCTAGCACTGACCATGGGCTTCAGGGAGTTTTGATTGATGCGCAAC
GCCATCCCCAAGCCTACGGCTTCATGGACACACCTGCTTTGACGGCTGCT
CCCACTGATGCGGCAAAGCCCGACGCGGAGAAGAGAGAAAAAGATGAGGG
CCTGGGGATGATCCACATCAAGCCGCGGTACGTGTACGCAACGGTGGCGA
ATCACCTGTACGACCATCCGTTCCAAATGCTCGTCGCGCTAAGCACCCCT
ATAATCGGGGGGTTTTTCTACACGGAGATGCAGAAACCGGGTTTAACAAG
TCGTTGGGCATTTCTGGGAAAGTGGGCACGGTCATGATTGCCATCACAGG
AAGCTTCTTCTTGTTCAGCGAACTGGCGTGCGTGCTGCCGTGGGAGCGGG
CTGTCTATCGGGATTAGGCGTCTTTGCTGCGCATAAATACAGCCCCTGGT
CTCAACGACAGCAATAATCATGGAGGAGAAAAGAGACGCTTTAAGCGTTA
AGCAACAAGTGGTGGACTTGGCTGTGGCCGAAGAAAGGAGAAATGCACCC
TTTCATTAGCCCAATGTGTCCGCCTTGAGCTATACTTCTGTGGGACAAAA
GGCAGCATTGGGAGAGAGGTTGTACAGAACGAGGCGAAAGACAGCTATAT
ACAAGGGCGAACAAGCAATATATAGGCTTGAAGTTGTCGCAGCGCATCAT
TCACACACGCGTGCAAGGTCAGGCCTCCGTGATCCTGATCCTAGCACTGA
CCATGGGCTTCAGGGAGTTTTGATTGATGCGCAACGCCATCCCCAAGCCT
ACGGCTTCATGGACACACCTGCTTTGACGGCTGCTCCCACTGATGCGGCA
AAGCCCGACGCGGAGAAGAGAGAAAAAGATGAGGGCCTGGGGATGATCCA
CATCAAGCCGCGGTACGTGTACGCAACGGTGGCGAATCACCTGTACGACC
ATCCGTTCCAAATGCTCGTCGCGCTAAGCACCCCTATAATCGGGGGGTTT
TTCTACACGGAGATGCAGAAACCGGGTTTAACAAGTCGTTGGGCATTTCT
GGGAAAGTGGGCACGGTCATGATTGCCATCACAGGAAGCTTCTTCTTGTT
CAGCGAACTGGCGTGCGTGCTGCCGTGGGAGCGGGCTGTCTATCGGGATT
AGGCGTCTTTGCTGCGCATAAATACAGCCCCTGGTCTCAACGACAGCAAT
AATCATGGAGGAGAAAAGAGACGCTTTAAGCGTTAAGCAACAAGTGGTGG
ACTTGGCTGTGGCCGAAGAAAGGAGAAATGCACCCTTTCATTAGCCCAAT
GTGTCCGCCTTGAGCTATACTTCTGTGGGACAAAAGGCAGCATTGGGAGA
GAGGTTGTACAGAACGAGGCGAAAGACAGCTATATACAAGGGCGAACAAG
CAATATATAGGCTTGAAGTTGTCGCAGCGCATCATTCACACACGCGTGCA
AGGTCAGGCCTCCGTGATCCTGATCCTAGCACTGACCATGGGCTTCAGGG
AGTTTTGATTGATGCGCAACGCCATCCCCAAGCCTACGGCTTCATGGACA
CACCTGCTTTGACGGCTGCTCCCACTGATGCGGCAAAGCCCGACGCGGAG
AAGAGAGAAAAAGATGAGGGCCTGGGGATGATCCACATCAAGCCGCGGTA
CGTGTACGCAACGGTGGCGAATCACCTGTACGACCATCCGTTCCAAATGC
TCGTCGCGCTAAGCACCCCTATAATCGGGGGGTTTTTCTACACGGAGATG
CAGAAACCGGGTTTAACAAGTCGTTGGGCATTTCTGGGAAAGTGGGCACG
GTCATGATTGCCATCACAGGAAGCTTCTTCTTGTTCAGCGAACTGGCGTG
CGTGCTGCCGTGGGAGCGGGCTGTCTATCGGGATTAGGCGTCTTTGCTGC
GCATAAATACAGCCCCTGGTCTCAACGACAGCAATAATCATGGAGGAGAA
AAGAGACGCTTTAAGCGTTAAGCAACAAGTGGTGGACTTGGCTGTGGCCG
AAGAAAGGAGAAATGCACCCTTTCATTAGC back to top
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