EWM24013.1, cds6657 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM24013.1 vs. NCBI_GenBank
Match: gi|585105300|gb|EWM24013.1| (hypothetical protein Naga_100040g22 [Nannochloropsis gaditana]) HSP 1 Score: 506.138 bits (1302), Expect = 0.000e+0 Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0
Query: 1 MHPFISKGEVSTTAIIMEEKRDALSVKQQVVDLAVAEGVRAAVGAGCLSGLGVFAAHKYSPWFNKSLGISGKVGTVMIAITGSFFLFSELVLIDAQRHPQAYGFMDTPALTAAPTDAAKPDAEKREKDEGLGMIHIKPRYVYATVANHLYDHPFQMLVALSTPIIGGFFYTEMQKPGLKLSQRIIHTRVQGQASVILILALTMGFRDQCVRLELYFCGTKGSIGREVVQNEAKDSYIQGRTSNI 244
MHPFISKGEVSTTAIIMEEKRDALSVKQQVVDLAVAEGVRAAVGAGCLSGLGVFAAHKYSPWFNKSLGISGKVGTVMIAITGSFFLFSELVLIDAQRHPQAYGFMDTPALTAAPTDAAKPDAEKREKDEGLGMIHIKPRYVYATVANHLYDHPFQMLVALSTPIIGGFFYTEMQKPGLKLSQRIIHTRVQGQASVILILALTMGFRDQCVRLELYFCGTKGSIGREVVQNEAKDSYIQGRTSNI
Sbjct: 1 MHPFISKGEVSTTAIIMEEKRDALSVKQQVVDLAVAEGVRAAVGAGCLSGLGVFAAHKYSPWFNKSLGISGKVGTVMIAITGSFFLFSELVLIDAQRHPQAYGFMDTPALTAAPTDAAKPDAEKREKDEGLGMIHIKPRYVYATVANHLYDHPFQMLVALSTPIIGGFFYTEMQKPGLKLSQRIIHTRVQGQASVILILALTMGFRDQCVRLELYFCGTKGSIGREVVQNEAKDSYIQGRTSNI 244
BLAST of EWM24013.1 vs. NCBI_GenBank
Match: gi|669142644|ref|XP_008606884.1| (hypothetical protein SDRG_03045 [Saprolegnia diclina VS20] >gi|530741370|gb|EQC39612.1| hypothetical protein SDRG_03045 [Saprolegnia diclina VS20]) HSP 1 Score: 114.775 bits (286), Expect = 3.249e-28 Identity = 69/198 (34.85%), Postives = 108/198 (54.55%), Query Frame = 0
Query: 10 VSTTAIIMEEKRDALSVKQQVVDLAVAEGVRAAVGAGCLSGLGVFAAHKYSPWFNKSLGISGKVGTVMIAITGSFFLFSELVLIDAQRHPQAYGFMDTPALTAAPTDAAKPDAEKREKDEGLGMIHIKPRYVYATVANHLYDHPFQMLVALSTPIIGGFFYTEMQKPGLKLSQRIIHTRVQGQASVILILALTMGFRD 207
+S++ + KRDA ++ + +G++AA AG +G V AH SPWF LG+SGKVG ++A SF + +E L+ R+P AY + AP AAKPD H P ++ AN++YD+PF+ LV +TP++G F+ + + ++ SQ+I+HTR+ GQ S +++L TM F D
Sbjct: 1 MSSSPLSPNAKRDA------IISNSTTQGIKAAAIAGVTAGSLVAVAHHQSPWFRNRLGVSGKVGLAVMASLASFAIVAEQDLLRGSRNPDAY--LAELLEDNAPI-AAKPD-------------HHLP--LHQRAANYVYDYPFRTLVCSATPLVGLIFFDQSRNANIQFSQKIMHTRIYGQGSCVVLLLGTMAFHD 174
BLAST of EWM24013.1 vs. NCBI_GenBank
Match: gi|813126677|ref|XP_012197102.1| (hypothetical protein SPRG_03119 [Saprolegnia parasitica CBS 223.65] >gi|641538069|gb|KDO31903.1| hypothetical protein SPRG_03119 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 113.235 bits (282), Expect = 4.668e-27 Identity = 67/188 (35.64%), Postives = 103/188 (54.79%), Query Frame = 0
Query: 20 KRDALSVKQQVVDLAVAEGVRAAVGAGCLSGLGVFAAHKYSPWFNKSLGISGKVGTVMIAITGSFFLFSELVLIDAQRHPQAYGFMDTPALTAAPTDAAKPDAEKREKDEGLGMIHIKPRYVYATVANHLYDHPFQMLVALSTPIIGGFFYTEMQKPGLKLSQRIIHTRVQGQASVILILALTMGFRD 207
KRDA ++ + +G++AA AG +G V AH SPWF LG+SGKVG ++A SF + +E L+ R+P AY + AP AAKPD H P ++ AN++YD+PF+ LV +TP++G F+ + + ++ SQ+++HTR+ GQ S +++L TM F D
Sbjct: 50 KRDA------IISNSTTQGIKAAAIAGVTAGSLVAVAHHQSPWFRNRLGVSGKVGLAVMASLASFAIVAEQDLLRGSRNPDAY--LAELHEDNAPI-AAKPD-------------HHLP--LHQRAANYVYDYPFRTLVCSATPLVGLIFFDQSRNANIQFSQKVMHTRIYGQGSCVVLLLGTMAFHD 213
BLAST of EWM24013.1 vs. NCBI_GenBank
Match: gi|1173937496|gb|OQR88271.1| (hypothetical protein ACHHYP_06983 [Achlya hypogyna]) HSP 1 Score: 111.309 bits (277), Expect = 7.843e-27 Identity = 65/198 (32.83%), Postives = 105/198 (53.03%), Query Frame = 0
Query: 10 VSTTAIIMEEKRDALSVKQQVVDLAVAEGVRAAVGAGCLSGLGVFAAHKYSPWFNKSLGISGKVGTVMIAITGSFFLFSELVLIDAQRHPQAYGFMDTPALTAAPTDAAKPDAEKREKDEGLGMIHIKPRYVYATVANHLYDHPFQMLVALSTPIIGGFFYTEMQKPGLKLSQRIIHTRVQGQASVILILALTMGFRD 207
+S++ + KRD ++ + EG++AA AG +G V AAH SPWF LG+SGKVG ++A SF + +E L+ R+P Y A + A+ EK+ D L + H +AN +YD+PF+ L + P++G F+ + + ++ SQ+I+HTR+ GQ + +++L TMGF D
Sbjct: 1 MSSSPLSATAKRDV------IISNSTTEGLKAAAIAGVTAGSLVAAAHHQSPWFRNRLGVSGKVGLAVMASLASFAIVAEQDLLKGSRNPDQY---------IAELNQAEAPIEKKS-DHHLALHH--------RLANFVYDYPFRTLAFSAAPLVGLIFFDQSRNTNIQFSQKIMHTRIYGQGACVVLLLSTMGFHD 174
BLAST of EWM24013.1 vs. NCBI_GenBank
Match: gi|299472452|emb|CBN79726.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 109.768 bits (273), Expect = 6.732e-26 Identity = 69/194 (35.57%), Postives = 103/194 (53.09%), Query Frame = 0
Query: 22 DALSVKQQVVDLAVAEGVRAAVGAGCLSGLGVFAAHKYSPWFNKSLGISGKVGTVMIAITGSFFLF----SELVLIDAQRHPQAYGFMDTPALTAAPTDAAKPDAEKREKDEGLGMIHIKPRYVYATVANHLYDHPFQMLVALSTPIIGGFFYTEMQKPGLKLSQRIIHTRVQGQASVILILALTMGFRDQCVR 211
DA + +V+ LA EG++A AG LS GV AA+K+SPWF KS +S K +A++ FFLF +ELV+ A P AYG +D + T +K ++E + +AN Y +PF+M+V + P +GG Y+ + LKLSQ++IHTRV GQ +V+ + M F++ R
Sbjct: 8 DATEKRGRVLRLAQEEGMKAGGLAGLLSCAGVVAANKFSPWFRKSTSVSAKTA---LAVS-PFFLFYLLRTELVMHGANHDPHAYGIVDDVVGSDDTTRKSKILQPRKELNAA------------QQLANWCYVNPFKMVVGMGVPAVGGILYSMRNEGNLKLSQKLIHTRVYGQMTVVSMAVAMMAFQETMRR 185
BLAST of EWM24013.1 vs. NCBI_GenBank
Match: gi|669142640|ref|XP_008606882.1| (hypothetical protein SDRG_03043 [Saprolegnia diclina VS20] >gi|530741368|gb|EQC39610.1| hypothetical protein SDRG_03043 [Saprolegnia diclina VS20]) HSP 1 Score: 104.76 bits (260), Expect = 2.548e-24 Identity = 58/188 (30.85%), Postives = 94/188 (50.00%), Query Frame = 0
Query: 22 DALSVKQQVVDLAVAEGVRAAVGAGCLSGLGVFAAHKYSPWFNKSLGISGKVGTVMIAITGSFFLFSELVLIDAQRHPQAY--GFMDTPALTAAPTDAAKPDAEKREKDEGLGMIHIKPRYVYATVANHLYDHPFQMLVALSTPIIGGFFYTEMQKPGLKLSQRIIHTRVQGQASVILILALTMGFRD 207
DA + ++ + G++A+ AG +G V AH SPWF LG+SGKVG ++A +F + +E L+ R+P AY +T +D P +Y AN++YD+PF+ LV + P++G F + + ++ SQ+I+HTR+ GQ S +++L TM F D
Sbjct: 2 DATQKRDIIISNSTTSGLKASAIAGVTAGSLVTLAHHQSPWFRNRLGVSGKVGLAVMASLATFAIVAEQDLLKGSRNPDAYIAELNETETKQVIKSDNHLP--------------------LYQQAANYVYDYPFRTLVCSAAPLVGLIFLDQSRNANIQFSQKIMHTRIYGQGSCVVLLLGTMAFHD 169
BLAST of EWM24013.1 vs. NCBI_GenBank
Match: gi|1173937512|gb|OQR88287.1| (hypothetical protein ACHHYP_06981 [Achlya hypogyna]) HSP 1 Score: 103.99 bits (258), Expect = 4.876e-24 Identity = 57/186 (30.65%), Postives = 96/186 (51.61%), Query Frame = 0
Query: 22 DALSVKQQVVDLAVAEGVRAAVGAGCLSGLGVFAAHKYSPWFNKSLGISGKVGTVMIAITGSFFLFSELVLIDAQRHPQAYGFMDTPALTAAPTDAAKPDAEKREKDEGLGMIHIKPRYVYATVANHLYDHPFQMLVALSTPIIGGFFYTEMQKPGLKLSQRIIHTRVQGQASVILILALTMGFRD 207
DA + + ++ + EG++A+ A +G V AH SPWF LG+SGKVG ++A +F + +E L+ R+P Y + E ++ + H P +Y AN++YD+PF+ LV + P++G F + + ++ SQ+I+HTR+ GQ S +++L TM F D
Sbjct: 2 DAHTKRDIIISNSTTEGLKASAVAAVTAGSLVTLAHHQSPWFRNRLGVSGKVGLAVMASLATFAIVAEQDLLRGSRNPDQY----------------IAELNNTETEKVVTSDHHLP--LYQQAANYVYDYPFRTLVCSAAPLVGLIFLDQSRNANIQFSQKIMHTRIYGQGSCVVLLLGTMAFHD 169
BLAST of EWM24013.1 vs. NCBI_GenBank
Match: gi|813126683|ref|XP_012197104.1| (hypothetical protein SPRG_03121 [Saprolegnia parasitica CBS 223.65] >gi|641538071|gb|KDO31905.1| hypothetical protein SPRG_03121 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 103.219 bits (256), Expect = 8.037e-24 Identity = 56/186 (30.11%), Postives = 97/186 (52.15%), Query Frame = 0
Query: 22 DALSVKQQVVDLAVAEGVRAAVGAGCLSGLGVFAAHKYSPWFNKSLGISGKVGTVMIAITGSFFLFSELVLIDAQRHPQAYGFMDTPALTAAPTDAAKPDAEKREKDEGLGMIHIKPRYVYATVANHLYDHPFQMLVALSTPIIGGFFYTEMQKPGLKLSQRIIHTRVQGQASVILILALTMGFRD 207
DA + +++ + G++A+ AG +G V A+ SPWF LG+SGKVG ++A +F + +E L+ R+P AY + + E + + H P +Y AN++YD+PF+ LV + P++G F + + ++ SQ+++HTR+ GQ S +++L TM F D
Sbjct: 2 DATQKRDIIINNSTTSGLKASAIAGVTAGSLVALANHQSPWFRNRLGVSGKVGLAVMASLATFAIVAEQDLLKGSRNPDAY----------------IAELNETETKQVIKSDHHLP--MYQQAANYVYDYPFRTLVCSAAPLVGLIFLDQSRNANIQFSQKVMHTRIYGQGSCVVLLLGTMAFHD 169
BLAST of EWM24013.1 vs. NCBI_GenBank
Match: gi|1173955052|gb|OQS02127.1| (hypothetical protein THRCLA_05480 [Thraustotheca clavata]) HSP 1 Score: 107.457 bits (267), Expect = 8.165e-24 Identity = 67/210 (31.90%), Postives = 112/210 (53.33%), Query Frame = 0
Query: 1 MHPFI-SKGEVSTTAIIM--EEKRDALSVKQQVVDLAVAEGVRAAVGAGCLSGLGVFAAHKYSPWFNKSLGISGKVGTVMIAITGSFFLFSELVLIDAQRHPQAYGFMDTPALTAAPTDAAKPDAEKREKDEGLGMIHIKPRYVYATVANHLYDHPFQMLVALSTPIIGGFFYTEMQKPGLKLSQRIIHTRVQGQASVILILALTMGFRD 207
MH I +G + IIM E KRD ++ ++A G++A+ + G V+AA++ SP F LG+SGK+G V +A GSFF+ E L+ R+P AY D AE+ ++ L + P+ VAN++YD+PF+ L +TP++ ++ + + +++SQ+I+HTR+ GQ + +++L TM F D
Sbjct: 154 MHTRIYGQGASDHSVIIMSVESKRDIITAN------SLAVGLQASAVSSLAMGAIVYAANQVSPTFRNRLGLSGKIGFVAMAGLGSFFIAGEQDLLKGSRNPDAY-----------IADLEGKKAEQSQQKSSLSL----PK----QVANYVYDNPFRTLAMTATPLVAAIYWDQSRNAHIQVSQKIMHTRIYGQGACVVLLLSTMAFHD 338 HSP 2 Score: 78.5666 bits (192), Expect = 2.380e-13 Identity = 50/175 (28.57%), Postives = 87/175 (49.71%), Query Frame = 0
Query: 22 DALSVKQQVVDLAVAEGVRAAVGAGCLSGLGVFAAHKYSPWFNKSLGISGKVGTVMIAITGSFFLFSELVLIDAQRHPQAY--GFMDTPALTAAPTDAAKPDAEKREKDEGLGMIHIKPRYVYATVANHLYDHPFQMLVALSTPIIGGFFYTEMQKPGLKLSQRIIHTRVQGQAS 194
DA + + V+ + +G++A A ++G V A+ S WF LG+SGKVG ++A +F + SE L+ R+P + T ++ D P +Y AN++YD+PF+ LV+ + P++G FY + + ++ SQ+I+HTR+ GQ +
Sbjct: 9 DAKTKRDIVITHSTTQGLKAGGVAAVVAGSAVALANNQSQWFRNRLGVSGKVGLAVMASLATFAIVSEQDLLRGSRNPDQFIAEMNQTESVQVKKADHHLP--------------------LYQQAANYVYDYPFRTLVSSAVPLVGLIFYEQSRNANIQFSQKIMHTRIYGQGA 163
BLAST of EWM24013.1 vs. NCBI_GenBank
Match: gi|813126680|ref|XP_012197103.1| (hypothetical protein SPRG_03120 [Saprolegnia parasitica CBS 223.65] >gi|641538070|gb|KDO31904.1| hypothetical protein SPRG_03120 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 103.219 bits (256), Expect = 1.044e-23 Identity = 62/188 (32.98%), Postives = 101/188 (53.72%), Query Frame = 0
Query: 20 KRDALSVKQQVVDLAVAEGVRAAVGAGCLSGLGVFAAHKYSPWFNKSLGISGKVGTVMIAITGSFFLFSELVLIDAQRHPQAYGFMDTPALTAAPTDAAKPDAEKREKDEGLGMIHIKPRYVYATVANHLYDHPFQMLVALSTPIIGGFFYTEMQKPGLKLSQRIIHTRVQGQASVILILALTMGFRD 207
KRD ++ VV G++A+V + G V+AA++ S F LG+SGK+G V +A FF+ E L+ R+P AY TAA T+ A P + LG+ H +AN++YD+PF+ L ++TP++G + + + ++ SQ+I+HTR+ GQ + +++L TM F D
Sbjct: 7 KRDIITANSLVV------GLQASVVSAATMGAVVYAANQTSATFRNRLGLSGKLGFVAMAGLAGFFIAGEQDLLKGSRNPDAYIAELEGNTTAAMTNVASPR-------KSLGLHH--------QLANYIYDNPFRSLTCMATPLVGFIYLDQSRNANIQFSQKIMHTRIYGQGACVVLLLSTMAFHD 173 The following BLAST results are available for this feature:
BLAST of EWM24013.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|