|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100040g21.2034.mrna |
| Orig protein id | gnl|cribi|Naga_100040g21.2034 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:224280..226193 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6672 ID=rna6672|Name=rna6672|organism=Nannochloropsis gaditana|type=mRNA|length=2520bp
ATGAAAAGCCAAATTGCGCTTCTCGCGGTGACGTTTCCGCCGTTGCTGGG
GGTCGGGGCATTTGTCATTCCAGGCAAGGGCAGACTGCCGGCGTCGGTGC
CTATCTCTCCAATCAAGACCATCTTCACCATTTTCACCGCATCCAAACCC
CAGTTGGCACCACTACAGGCCAAAGTAGACTTGTTCAACCGCGCGTCCCT
TCCATCAGAGACTGGGAACAACCATTCCGGCGGGGAGGCATCCCCTTCGG
AAAGGGTACCCGAGAAGGAGAAGCTGCCGGGGGACTTCCGCGAGGCCCTG
CGTAACGCCCTCTGGGATTTGGACGACAAAATCCACGAATTTTTGCCTTA
CGATGAAGCCAGCGCGGAGGTTGATCCCATGTACTTTGTGCACGCCATCC
AAGACCGCTTGAACCAAATTGCGTCGAGCAGAAAGATGGCTTCGAAAACA
CCCGCGAAGAGCAGTCCTGCCGCCACCCACAGTAGCACCAGCGCTGTCGA
CCGTGACGTGTCCTTGACGAGCACTACAGCAGTGACCTCGCTGCAATGCA
GCGCTCAGGACGTGCTCTCCAAGACCCAGGCAGCCGCTACAGCCACCCAG
GCCCCGGTGGTGGAGGCCCTTCAAGAAGGGATCAAGCAGGTGCCCCCCCC
GCCCCCCGCCACCCCCAGCGCCGTACTTTCCTCCCCATATGAAGCGGAAA
AGGCGTCTTCCGCTTCTTCTTCCCCGTCGCCTGGAATCACCCCGGGGGAA
GGAGGTTCTACCACCTTGATGTATCGGGAAGACACGGCGGCTGTGAAGAC
GCGGAGCAAGCGGTGGGTGGAGGAACGCGTGAGATTGGACAGGGCAAGAC
CAGGAGGGGCCCCAAAACCTGCGTTGGAGTCCCCCCCTCGAACATCTGCC
CCTGTCGCTCCTTCCTCGAGGGACGTGGGTGCTGGAAACGCGGGCAAGCG
AGCCAGCCAGCCGCGTTGGCGCCGAGACGGGGACCGGGAGGAGGCCCTGC
GTCGGAGGGAGAAGGTGCAGATCGCCCGGCAGCAACGTCAGCAAGAGTTG
CAGGCCTTGGCCGTCGCAGAGGCCTCCAAACCCAAGAAAGAGGCACCAGC
CTCGGCTTCAGTCCAGGGCCCGTTCGCCGCCGAAGACCCTCCCCTCAAGG
TCAGCAAGCCCGCGATGGAGGCCACGGTGGCCGCCGAGATGGCTCAAGTC
CTCTCTCAGCCCCGTAACGTCAAGCGGATGACGACAAGGGCGGACCGATC
CCGAGGCGTGCTGGTGGTGGACGGCGTTGAAGACCTGACCATGCCCGCAG
CCACCACGACGGTACAGGAGGCAATGCGGCAAGCGGCCTCCCAACGCCCC
AAGGCCCTCATCGACACGGCCGAGGAGCTCCGCATCGGGCCTCTGGAGAC
CACGGTTTCCCCCCGCATGGTCACGCCCCCCTCGCCCACACTCACAGGGG
CGGCGGAGGAGGACTTAAATTTCATGCCACCCGCCGACAGGTCTTCCGTC
GAGCACATCCTCTTGGACTCGAAAACGGCGGCCGTGGAGGAATGGCATCG
GACCCGTTCTTTGGAGCAGGAGATGAGTTTGGAGGACAAAGTCTTGGCGG
TGGAAAGTCGCTTGATGGACGAAATCCGCGCGGGGCCTTCGGAGGCGATT
CTGAACTACGTGACGGTCCTGGAAAGAATCGGTGAGCATCAGGCCCTGCC
CGGTAAGACGTCCGTCTCCGAAGGTCCCCAGCGGTGGGACTTGGCGTACA
GCAGCCTCCCTGTATCGCCTTTTTTGTCCCTCCCCCGCTTTCTCGCGCGC
TTTTTGGTGAATGTGGCCGTGAAGATGGAGGGGGGAGGGAAGACGGTCGT
TTTTCAGGCGGTTTTCAAATTCTTGGAATGGTTTCCCCGCCTCCGTCGCA
CGCAGACAGCGACTGTCTCTGTGCTCACCCCCCGAAAGTCGGTGGAGGTG
ATGAATGGCCGACCTCGTTTCCGCTTGGGTCGCCTTTTCACCATCACTCA
GCCCCGACTCCGGCTACCCTTCATAAGGAATGCAAAGAAGGCAACAGATA
GCTTAGCCCCACCGGAGTTGACCGACACATGCACCTATATGGGGGCCCAC
TTGAAAATCTGCCGCTGGACCCGCTCTCCCGGCGTCTCGGCGGAGCCCTT
GTTGGCGGTCTTCTTCCGGGGCCATTCCCCCGCCAAGAATCAGGAATGGG
GCGTGGAGGAGGAAGGAGAGGGCAGATGCCCAAACCTGGCATGGCCTAGG
GAGTGGTCTGAAGGAAAGGATTGTGCGGAGGGAGGAATTAAGGTAAAGGT
ACTGTGTAATGTACGCTGTGTCCTGTATACATATCTGGTTTTGCGGTTGA
CTCACTGGAGAAAGATGGAAGAGGTACGATGGCCCTTCGCAGCCCCTGGC
GTGATGCACAAGTGGAAGAGGGTGCGCACGTGCTGGCTTGGCTATTTAAG
TGTCTTGTGCCGTGGGTGCAGCGAGGATTTTATTGGCCAGGAGAAGAAGG
ACTGGTTTTTAATTCCATGA back to topprotein sequence of rna6672 >rna6672-protein ID=rna6672-protein|Name=rna6672|organism=Nannochloropsis gaditana|type=polypeptide|length=320bp
MSACLLFIPYPDDNVYMTEQRSTLNYLRAGVTRSLKALEKKIHTCVSPGH
PVRRATLELKAYPHEILFFSLCRVGVMRTISTLVALSAIVGCSAFLAPMP
APRQLTRVHAGASAGGDDDWKNIINSEANLASYLSEEGFRYCLNKTPEEL
EKEGDYNIFEKMFGATSNNAARMAARSFGRSLTIDAYDAKKAAENKEWVA
KYGYKRWVTSYVDKSDLETEKGAAPAAVAASAKKAAPPAQPRKPAFSFPK
FGGQVAASTPGPAKKSSPVKVTAAAKPAAAKPAPTPKAAAPKAKAAAPTG
PLSGKPQAQGKGNLNLLKKK back to topmRNA from alignment at CM002469.1:224280..226193- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6672 ID=rna6672|Name=rna6672|organism=Nannochloropsis gaditana|type=mRNA|length=1914bp|location=Sequence derived from alignment at CM002469.1:224280..226193- (Nannochloropsis gaditana)
GGCCGAGGAGACGCACGCACAATCCCTCATTATGACTCTGGCTGGTTTTC
TCGTCGATGGAGCAGCACAAGATCGTCTAGGATAAATGCAACCTACTCGA
TGTCTGCCTGCCTCCTCTTTATACCTTACCCCGATGATAACGTGTACATG
ACGGAGCAAAGGAGCACTCTCAATTACCTTCGCGCCGGGGTTACCCGCTC
GTTGAAGGCGCTTGAGAAAAAGATACACACATGCGTGTCTCCAGGGCACC
CTGTGCGGAGAGCCACCCTAGAGCTGAAAGCTTACCCTCATGAAATCTTA
TTCTTCTCATTGTGCAGGGTAGGAGTCATGCGGACGATATCGACGCTCGT
AGCGTTGTCTGCCATCGTTGGTTGCAGCGCATTTTTGGCCCCGATGCCAG
CGCCCCGGCAGGTAAGGTTGACACGTCCTCGCAATGGTTTGGAAGTCAGC
ACGGAAGGCCAATGTCCTCGAATTTAAATTTGGACAGAAGCGGTGATAAC
TGATGATGAATCTATGGTTAGACGTTCATTCGTGGAGCCTTCTTATCTGA
TGTTGTCTTTTTTACTGCAATTGACTCATTATGTCAATCCCGCAATACAT
CGCTCGCTGCCTTGACCATTCGGAACCCTAACCATTCCTACAAAACCCAG
CAGAGCTTCACATGCTATGCAGCCTCGTCTTTTCTTAATGTTTCCGTTGA
ATGGCCCCCCTCATTGTCGCGTCTGTGCTTGGCTTTCGTGCGATGGTGTC
GAGCGCATATTCATTTACGCGTCCGGTCATAAACGCATGCACAACAAACA
GCTTACTCGCGTCCATGCCGGCGCCTCTGCCGGAGGAGACGATGACTGGA
AGAATATCATCAACTCTGAGGCTAATCTTGCAAGCTATCTTAGCGAGGAG
GGGTTCCGATACTGCTTAAACAAGACACCTGAGGAACTGGAGAAGGAGGG
TGACTACAATATTTTCGAGAAGATGTTCGGTGCCACAAGCAACAACGCCG
CACGCATGGCTGCCCGCTCCTTCGGAAGATCTTTGACAATTGACGCATAC
GACGCGAAGAAAGCGGCCGAAAATAAGGAGTGGGTTGCCAAGTACGGATA
CAAACGATGGGTTACCAGCTACGTTGACAAGTCCGACCTGGAGACGGAGA
AAGGCGCCGCGCCCGCTGCCGTGGCAGCTTCTGCCAAGAAAGCGGCTCCT
CCTGCACAACCGCGCAAACCGGCCTTCTCTTTTCCCAAATTTGGAGGCCA
GGTGGCAGCAAGCACCCCCGGTCCCGCCAAGAAGAGTAGCCCGGTTAAGG
TGACAGCAGCAGCCAAGCCGGCCGCTGCCAAGCCGGCACCAACTCCCAAA
GCGGCGGCCCCTAAGGCCAAAGCTGCAGCCCCCACCGGTCCGTTGAGCGG
CAAGCCCCAGGCACAGGGAAAGGGCAACCTCAACTTGTTGAAGAAGAAGT
GAGCGACGGCGAATGACTCGGCGGGGGATAAAATAGGCGAAGAGGGCATA
TGCATGAATGACGGTAGCTGGTCGGTGGATGAGAGAGAAAGGCAAACCGG
AACAGAAGAAAATCTGGAAAGTGCCTTGTCTCGCGGTAGGATGACACCTC
TGTAAAGAGGCGCCCGCCGCGAGCGGGACATCCCCATCCGCTCTCGGGAG
TGTCCGTAGGGAAGGGTAAGGCGGCAGCGTAAGCGCGATGCTGGAGCAGA
AAAATAGACGCCCAGCGCTTTTCGGGACACATAGGGGTCTTATGACGTCG
CAGACAGGGAGAGACGTGGAGAGAGCCAGAGTGAGGACACTGACGACGAT
GAAGATACCGACATATAATGATCATACATCAAAAACATGTTTGTTTACCT
TTTTCGTTCTTTTGTGGTTCGATCAATCAATAAATCATGGAATTAAAAAC
CAGTCCTTCTTCTC back to topCoding sequence (CDS) from alignment at CM002469.1:224280..226193- >rna6672 ID=rna6672|Name=rna6672|organism=Nannochloropsis gaditana|type=CDS|length=1926bp|location=Sequence derived from alignment at CM002469.1:224280..226193- (Nannochloropsis gaditana)
CTTACTCGCGTCCATGCCGGCGCCTCTGCCGGAGGAGACGATGACTGGAA
GAATATCATCAACTCTGAGGCTAATCTTGCAAGCTATCTTAGCGAGGAGG
GGTTCCGATACTGCTTAAACAAGACACCTGAGGAACTGGAGAAGGAGGGT
GACTACAATATTTTCGAGAAGATGTTCGGTGCCACAAGCAACAACGCCGC
ACGCATGGCTGCCCGCTCCTTCGGAAGATCTTTGACAATTGACGCATACG
ACGCGAAGAAAGCGGCCGAAAATAAGGAGTGGGTTGCCAAGTACGGATAC
AAACGATGGGTTACCAGCTACGTTGACAAGTCCGACCTGGAGACGGAGAA
AGGCGCCGCGCCCGCTGCCGTGGCAGCTTCTGCCAAGAAAGCGGCTCCTC
CTGCACAACCGCGCAAACCGGCCTTCTCTTTTCCCAAATTTGGAGGCCAG
GTGGCAGCAAGCACCCCCGGTCCCGCCAAGAAGAGTAGCCCGGTTAAGGT
GACAGCAGCAGCCAAGCCGGCCGCTGCCAAGCCGGCACCAACTCCCAAAG
CGGCGGCCCCTAAGGCCAAAGCTGCAGCCCCCACCGGTCCGTTGAGCGGC
AAGCCCCAGGCACAGGGAAAGGGCAACCTCAACTTGTTGAAGAAGAAGTG
AATGTCTGCCTGCCTCCTCTTTATACCTTACCCCGATGATAACGTGTACA
TGACGGAGCAAAGGAGCACTCTCAATTACCTTCGCGCCGGGGTTACCCGC
TCGTTGAAGGCGCTTGAGAAAAAGATACACACATGCGTGTCTCCAGGGCA
CCCTGTGCGGAGAGCCACCCTAGAGCTGAAAGCTTACCCTCATGAAATCT
TATTCTTCTCATTGTGCAGGGTAGGAGTCATGCGGACGATATCGACGCTC
GTAGCGTTGTCTGCCATCGTTGGTTGCAGCGCATTTTTGGCCCCGATGCC
AGCGCCCCGGCAGCTTACTCGCGTCCATGCCGGCGCCTCTGCCGGAGGAG
ACGATGACTGGAAGAATATCATCAACTCTGAGGCTAATCTTGCAAGCTAT
CTTAGCGAGGAGGGGTTCCGATACTGCTTAAACAAGACACCTGAGGAACT
GGAGAAGGAGGGTGACTACAATATTTTCGAGAAGATGTTCGGTGCCACAA
GCAACAACGCCGCACGCATGGCTGCCCGCTCCTTCGGAAGATCTTTGACA
ATTGACGCATACGACGCGAAGAAAGCGGCCGAAAATAAGGAGTGGGTTGC
CAAGTACGGATACAAACGATGGGTTACCAGCTACGTTGACAAGTCCGACC
TGGAGACGGAGAAAGGCGCCGCGCCCGCTGCCGTGGCAGCTTCTGCCAAG
AAAGCGGCTCCTCCTGCACAACCGCGCAAACCGGCCTTCTCTTTTCCCAA
ATTTGGAGGCCAGGTGGCAGCAAGCACCCCCGGTCCCGCCAAGAAGAGTA
GCCCGGTTAAGGTGACAGCAGCAGCCAAGCCGGCCGCTGCCAAGCCGGCA
CCAACTCCCAAAGCGGCGGCCCCTAAGGCCAAAGCTGCAGCCCCCACCGG
TCCGTTGAGCGGCAAGCCCCAGGCACAGGGAAAGGGCAACCTCAACTTGT
TGAAGAAGAAGTGAATGTCTGCCTGCCTCCTCTTTATACCTTACCCCGAT
GATAACGTGTACATGACGGAGCAAAGGAGCACTCTCAATTACCTTCGCGC
CGGGGTTACCCGCTCGTTGAAGGCGCTTGAGAAAAAGATACACACATGCG
TGTCTCCAGGGCACCCTGTGCGGAGAGCCACCCTAGAGCTGAAAGCTTAC
CCTCATGAAATCTTATTCTTCTCATTGTGCAGGGTAGGAGTCATGCGGAC
GATATCGACGCTCGTAGCGTTGTCTGCCATCGTTGGTTGCAGCGCATTTT
TGGCCCCGATGCCAGCGCCCCGGCAG back to top
|