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Properties
| Property Name | Value |
|---|
| Product | uroporphyrinogen-iii synthase |
| Orig transcript id | gnl|cribi|Naga_100040g15.2013.mrna |
| Orig protein id | gnl|cribi|Naga_100040g15.2013 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:211808..213357 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6667 ID=rna6667|Name=rna6667|organism=Nannochloropsis gaditana|type=mRNA|length=1523bp
AAGGTAGTTTTTCATCGTCTCTGAGTACAAGCAGGGAGGGCACATTCGTA
ATGCGGGCTGAAATACGCGTGATCATATCTAAGCAGCTCTCCCCGTTGGT
TCCACAGGAAAGTGTTCAAATTCAGACAAAATGGGGGACAGCGTCAGGGA
TCTAATGCGAAAGGCAGCCAAAGACAAGCAGCGCAAAGCTGATGCAATAG
CAGCGGCCGTGGCAAAGAGCAAAGGGAAAGAAGAACTTTTGGCACTATTG
CGTAAGAAAGTCGGGGAAAACGCACCGACAGCCAAGAAGACTCTGGCCGC
AGCTGCAGCCGCCTCGCCATCAGCCGAAGAGCAGCATTCTGCTCTGTTTG
GATCAAATCTACCCGATGCTACAACATCGTCATCAGCATCTACGCAAAAA
ACATGGAAAGTCGCCCTCTCGGCTTTACCGGGCGCGATGGCCCCTCCGCC
CCCTCGGAGCAGGCAACCTCCTCCACCCCCTCCCTCTCCAGCACTTCCAC
CTCCTGATCCTCCTGCCACGACCAAGGCGCTGCCAGGCATTGAGCACGTG
GACTCGGACGATGAAGAGGAGGAAGAAGCAGTGCAGGCCATCACTCCTTC
CCTCCCTGTCCCGCCCGCGGCTCTACCCGCCGGGTTCTTCGATGAGGGCG
TGGACGTTGCGGAGAATGCCGCAGTGAGAGGGGGCAACGTAGAGGAAAAC
GATGGCGATGGGGAGGCCGGCTCGCTTCCTTCCTCCCCGAAACCCGAGAC
GTCCAGTGCCAGCACCAGTGCCCTGCCCACTGGCTTCTTTGACGACCCCG
AGGCGGACGCGCTCGCCCACAACATTGACCTCAACGCTCAAAAAGAGGCG
GAGGCAAGAAAGGAATGGGAGGACTTTCAGAAGTTCGCTGCAGACGTGGC
GGTGGCCGAGGCAGGCCAGGAGGCGGTGGAGGAAGAGGAGTGGGAGGAGG
AGGAGCGACGGAAGGAACTCGAACATTTGTACTACACTGCCAGGCTCGCA
GGGCTCATAGCCACGTCGGGGGAGGCGACGGAGCGACGGATGAAGAAACG
GGGGAAGGACGGAGAGGGGGAAGGAGAAGGAGAGGGGATGAAGAAGGGTG
AGGCAGTGAGTAATTCGGGGGCATTGCCGGGCGTGCCCTCCAAGGCGGAG
GCCCCTACATGGCGCGCCGTCCCTGAGGACGAGGATGGGGATGGAAAGGA
GAGGGTTGGGGACGAGGGTCGCGAAAAAGAAACGGTGGCCGCTCTAGAGA
TCTCGGCCATGCTTCGGGAGAAAAAGCGGCGGAAGAAAGAGGCGATGCAG
GAGGTCGTGCAGGACGGATACGTCGCTCCCGACCCCCTGGACTGGAGGGC
GAAATCATTTGCATAATGAGGGAGGGCGGTAAAGGAATAAACGCTCGATG
TTCTTGAGAATATGTGTTCTTTTTAAATTCCTGATGGTGCTGGCTCTGCG
GGATTGAAACGTGTCCACTCCGCAGTGTGATAGGAGAGGTCGCAGAGAGT
CGTGGCCGCGGGATGGCAACCCA back to topprotein sequence of rna6667 >rna6667-protein ID=rna6667-protein|Name=rna6667|organism=Nannochloropsis gaditana|type=polypeptide|length=392bp
MPQSLVSSPSRLCSPLFSFVGLILSAAVSFLTVNVLASHAYLLPAPPQHE
QQPSFHQQVHPNYLNKHGQTQSFGYSSVEVNRARMPSNMVGISQRIKSSL
FAGRSSAPPSTSTSSRNVVVLTREAGKNDKLRRILESQKITALEIPCIAH
CHAEGYAQLKETLDGEAFDYIVITSPEAAQVFLEAARTCTLYKPTNLVSI
GEATGELLKKAGASIVFTPSKALAKVLVVELPEVHEERGGMRRRKTAKVL
YPASKRAAGTLEEGLQKRGLWEEVVEEEGEGMGGEKQSGRLFDVIRLNTY
DTVPADWTDEEMSLAQSCAVVTFASPSALKVWAARLGMDFNMACIGETTA
TAAIALGWDESRIFYPKDAPGIDGWASAVMDALEAKDEEVAG back to topmRNA from alignment at CM002469.1:211808..213357+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6667 ID=rna6667|Name=rna6667|organism=Nannochloropsis gaditana|type=mRNA|length=1550bp|location=Sequence derived from alignment at CM002469.1:211808..213357+ (Nannochloropsis gaditana)
TGCGACCTACAGGGATGCCGCAGTCACTAGTTTCTTCACCAAGTCGACTC
TGTTCACCGTTGTTCAGTTTTGTGGGCCTCATCCTCTCTGCAGCAGTAAG
CTTTTTGACCGTAAATGTCCTAGCCTCGCATGCTTACCTCCTGCCAGCGC
CACCCCAACACGAGCAACAGCCGTCGTTCCACCAGCAGGTGCATCCAAAC
TATCTTAATAAGCATGGACAGACCCAGTCATTCGGCTATTCCTCCGTAGA
GGTCAACCGTGCCCGCATGCCCTCGAATATGGTAGGGATAAGCCAAAGGA
TAAAATCATCCTTATTCGCTGGAAGGTCCtccgcgcccccctccacatcc
actTCCTCCAGAAATGTGGTCGTACTCACAagagaagcaggaaaaaatgA
TAAACTGCGTAGAATTTTGGAATCTCAGAAAATTACAGCGTTGGAAATTC
CTTGCATTGCGCATTGTCACGCGGAGGGATACGCGCAGTTGAAGGAGACA
TTGGACGGAGAGGCCTTCGATTATATCGTCATTACTTCGCCCGAGGTAAA
CACAAGAGATGAATAATGAGTAAAAATAGAGGACTGAGGAGGATTGGAGT
TTCTTTAAGCAGACAAAGATACCCTTGGCGTCTGtccagggggcgggggc
cttcGTCGGCTACCGTCGCATGGCTCGAGCTCTCGAGGAGACGTTGTATT
TcgctgcccctcttccttccctatCATGCCTCTCTCTGCTTTCCTCTTGC
ACAGAGTTACTAAAGCGCCAACCGCCCTTcccggtctcctccccccccct
ccgcagGCCGCTCAAGTCTTCCTGGAGGCCGCCCGAACGTGCACCCTTTA
CAAGCCCACCAATCTGGTGTCCATCGGAGAGGCTACGGGGGAGCTTCTGA
AAAAGGCCGGGGCCAGCATTGTCTTCACCCCCTCgaaggccttggccaag
gtATTGGTGGTGGAGCTTCCCGAGGTGcatgaagagaggggggggatgag
gaggagaaagacggcgAAAGTCTTGTATCCGGCGTCAAAAAGAGCGGCGG
GGACCTTGGAGGAAGGCCTGCAGAAGAGAGGGTTgtgggaggaagtggtg
gaggaggagggcgagggaatggggggagAAAAACAGAGCGGGAGGTTGTT
TGACGTGATTAGATTGAACACGTACGACACGGTGCCGGCCGACTGGACCG
ACGAGGAGATGTCCCTGGCTCAATCTTGCGCTGTCGTGACTTTTGCCAGC
CCCAGCGCCCTCAAAGTCTGGGCTGCGCGTCTTGGAATGGATTTTAATAT
GGCTTGCATTGGTGAGACGACCGCGACAGCAGCAATTGCATTGGGATGGG
ATGAATCGCGTATATTCTACCCAAAGGATGCCCCTGGTATAGATGGATGG
GCAAGTGCAGTCATGGATGCTTTGGAAgcgaaggacgaggaagtagCAGG
ATGAGCGAGGTGACGGAGGTTCAGCATCGACTGGATTCGGACGAATAACA
ACAAAAATGCCCAAAAGCCCCCATAACTAAATTAACTTGCGCCATCACCA
back to topCoding sequence (CDS) from alignment at CM002469.1:211808..213357+ >rna6667 ID=rna6667|Name=rna6667|organism=Nannochloropsis gaditana|type=CDS|length=2358bp|location=Sequence derived from alignment at CM002469.1:211808..213357+ (Nannochloropsis gaditana)
ATGCCGCAGTCACTAGTTTCTTCACCAAGTCGACTCTGTTCACCGTTGTT
CAGTTTTGTGGGCCTCATCCTCTCTGCAGCAGTAAGCTTTTTGACCGTAA
ATGTCCTAGCCTCGCATGCTTACCTCCTGCCAGCGCCACCCCAACACGAG
CAACAGCCGTCGTTCCACCAGCAGGTGCATCCAAACTATCTTAATAAGCA
TGGACAGACCCAGTCATTCGGCTATTCCTCCGTAGAGGTCAACCGTGCCC
GCATGCCCTCGAATATGGTAGGGATAAGCCAAAGGATAAAATCATCCTTA
TTCGCTGGAAGGTCCtccgcgcccccctccacatccactTCCTCCAGAAA
TGTGGTCGTACTCACAagagaagcaggaaaaaatgATAAACTGCGTAGAA
TTTTGGAATCTCAGAAAATTACAGCGTTGGAAATTCCTTGCATTGCGCAT
TGTCACGCGGAGGGATACGCGCAGTTGAAGGAGACATTGGACGGAGAGGC
CTTCGATTATATCGTCATTACTTCGCCCGAGGCCGCTCAAGTCTTCCTGG
AGGCCGCCCGAACGTGCACCCTTTACAAGCCCACCAATCTGGTGTCCATC
GGAGAGGCTACGGGGGAGCTTCTGAAAAAGGCCGGGGCCAGCATTGTCTT
CACCCCCTCgaaggccttggccaaggtATTGGTGGTGGAGCTTCCCGAGG
TGcatgaagagaggggggggatgaggaggagaaagacggcgAAAGTCTTG
TATCCGGCGTCAAAAAGAGCGGCGGGGACCTTGGAGGAAGGCCTGCAGAA
GAGAGGGTTgtgggaggaagtggtggaggaggagggcgagggaatggggg
gagAAAAACAGAGCGGGAGGTTGTTTGACGTGATTAGATTGAACACGTAC
GACACGGTGCCGGCCGACTGGACCGACGAGGAGATGTCCCTGGCTCAATC
TTGCGCTGTCGTGACTTTTGCCAGCCCCAGCGCCCTCAAAGTCTGGGCTG
CGCGTCTTGGAATGGATTTTAATATGGCTTGCATTGGTGAGACGACCGCG
ACAGCAGCAATTGCATTGGGATGGGATGAATCGCGTATATTCTACCCAAA
GGATGCCCCTGGTATAGATGGATGGGCAAGTGCAGTCATGGATGCTTTGG
AAgcgaaggacgaggaagtagCAGGATGAATGCCGCAGTCACTAGTTTCT
TCACCAAGTCGACTCTGTTCACCGTTGTTCAGTTTTGTGGGCCTCATCCT
CTCTGCAGCAGTAAGCTTTTTGACCGTAAATGTCCTAGCCTCGCATGCTT
ACCTCCTGCCAGCGCCACCCCAACACGAGCAACAGCCGTCGTTCCACCAG
CAGGTGCATCCAAACTATCTTAATAAGCATGGACAGACCCAGTCATTCGG
CTATTCCTCCGTAGAGGTCAACCGTGCCCGCATGCCCTCGAATATGGTAG
GGATAAGCCAAAGGATAAAATCATCCTTATTCGCTGGAAGGTCCtccgcg
cccccctccacatccactTCCTCCAGAAATGTGGTCGTACTCACAagaga
agcaggaaaaaatgATAAACTGCGTAGAATTTTGGAATCTCAGAAAATTA
CAGCGTTGGAAATTCCTTGCATTGCGCATTGTCACGCGGAGGGATACGCG
CAGTTGAAGGAGACATTGGACGGAGAGGCCTTCGATTATATCGTCATTAC
TTCGCCCGAGGCCGCTCAAGTCTTCCTGGAGGCCGCCCGAACGTGCACCC
TTTACAAGCCCACCAATCTGGTGTCCATCGGAGAGGCTACGGGGGAGCTT
CTGAAAAAGGCCGGGGCCAGCATTGTCTTCACCCCCTCgaaggccttggc
caaggtATTGGTGGTGGAGCTTCCCGAGGTGcatgaagagagggggggga
tgaggaggagaaagacggcgAAAGTCTTGTATCCGGCGTCAAAAAGAGCG
GCGGGGACCTTGGAGGAAGGCCTGCAGAAGAGAGGGTTgtgggaggaagt
ggtggaggaggagggcgagggaatggggggagAAAAACAGAGCGGGAGGT
TGTTTGACGTGATTAGATTGAACACGTACGACACGGTGCCGGCCGACTGG
ACCGACGAGGAGATGTCCCTGGCTCAATCTTGCGCTGTCGTGACTTTTGC
CAGCCCCAGCGCCCTCAAAGTCTGGGCTGCGCGTCTTGGAATGGATTTTA
ATATGGCTTGCATTGGTGAGACGACCGCGACAGCAGCAATTGCATTGGGA
TGGGATGAATCGCGTATATTCTACCCAAAGGATGCCCCTGGTATAGATGG
ATGGGCAAGTGCAGTCATGGATGCTTTGGAAgcgaaggacgaggaagtag
CAGGATGA back to top
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