rna6660, rna6660 (mRNA) Nannochloropsis gaditana

Overview
Namerna6660
Unique Namerna6660
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length591
Alignment locationCM002469.1:197935..198733 -

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Properties
Property NameValue
Productlactoylglutathione lyase
Orig transcript idgnl|cribi|Naga_100040g8.1993.mrna
Orig protein idgnl|cribi|Naga_100040g8.1993
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:197935..198733 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100040g8gene6438Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6660rna6660-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23995.1cds6644Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6660 ID=rna6660|Name=rna6660|organism=Nannochloropsis gaditana|type=mRNA|length=591bp
ATGTGTGGAGCCTTGTTTTTTGCCCATTATCTGTTTACTATTCCGATTGA
TATGGGGGGGTTGAGGTCCGAAAGGGTTCCCCAGGGGCCGCCGTGGCGCC
TCGACACCCAACCATCCGATAGTTTGTACAGCAGCGGGAGAGGGGATCGC
GCTCGCGATCAGCCCCCTTCTCTCCGAGCCAAATGTATTTCTTACGCATC
ACGATGGATAAGGCCAGTAAATAGAAAATACGGTCAAAGGCAGTCGGGCT
ACCCAGGCCTGTCGTACATCAGGCGGAAAAGTCAGGGAAAGAATAAATGT
CCGCAGCCTAAGGTACTAAGGCAAGATAGCAAAGCTACCATAGTGTGGGA
CAAGTTGCGTGCAGAACACAAGTCATTGTCGGGGGCTGTGTTAAAACACC
TGCGAGGAGGCGGTGGGACCAGGGAAAACCGCAGTGTGCTGCATGATCGA
AAAGCCAAACGTCACTTAAACGCGATACCCTACATTTCCACCAGGGCATT
GTTGTACAACGTCCAAAATTCAATTTTTCGATTTTTAAATTGTTCAAAAA
GAATAGCCTGGTCCGAATCGCAATGGAAACATTCAAAATAA
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protein sequence of rna6660

>rna6660-protein ID=rna6660-protein|Name=rna6660|organism=Nannochloropsis gaditana|type=polypeptide|length=234bp
MLRRFPGLSHPATVRYGRRLQPHGHTLQSESPGNPTSMPSCRPLSSSALL
PRPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIF
RVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLS
KQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVV
RAYESASVASNHELNCSRLSSQESALPLPTKGDQ
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mRNA from alignment at CM002469.1:197935..198733-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6660 ID=rna6660|Name=rna6660|organism=Nannochloropsis gaditana|type=mRNA|length=799bp|location=Sequence derived from alignment at CM002469.1:197935..198733- (Nannochloropsis gaditana)
ATGCTGCGGCGTTTTCCAGGATTGTCGCACCCGGCGACTGTCCGTTACGG
GCGTCGACTCCAGCCACACGGTCATACACTCCAGTCTGAAAGCCCAGGAA
ACCCCACGTCCATGCCATCCTGTCGCCCTCTTTCTTCATCTGCCCTTTTG
CCGCGTCCATTTCGTGTCTTGGGCTTGCAGCAAGTGGCCATCGGCGCGTT
GGACAAGTCAGGGCCATGCAGATTATGGGGCGATGTCCTCGGCGTTCCCA
TGACCGGCACGTATAAAAGCGAGTTGGAAAACGTTGATGAAGACATCTTC
CGTGTTGGCGCTCCGGACTGCCCGTGGGCTGTTGAAATCGATTTAATGCA
ACCCATCGACCCCGCTAAGGCGCCTAAAGTGCACGTTCCAGCTCTCAACC
ACATTGGCCTCTGGGTTCACCCTTTGACAGCCGCGGTGGAATACCTTTCC
AAGCAAGGTGTGCGTTTTACACCAGGTGGAATCCGACGTGGCGCCGCTGG
GCACGACGTCTGTTTCATTCATCCGAAAGGCAACGAGAAAAGCCCCTTGT
CAGGGGAGGGGGTTTTGATAGAGCTCGTGCAGGCCCCCCCGGAGGTCGTG
AGAGCGTACGAAAGCGCCGTGGAGACTGCCGACTCGGCGCGATCCAAGGG
TTAATTGCAATGAAGTCCATTGAGCACAAGCAGCGAAATTTCTACGTTTT
CTTTGTTCTAAGAGCGTGGCATCAAATCACGAGCTGAATTGTTCACGTTT
ATCAAGTCAAGAATCTGCCTTGCCCCTCCCAACAAAAGGTGACCAATGA
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Coding sequence (CDS) from alignment at CM002469.1:197935..198733-

>rna6660 ID=rna6660|Name=rna6660|organism=Nannochloropsis gaditana|type=CDS|length=1410bp|location=Sequence derived from alignment at CM002469.1:197935..198733- (Nannochloropsis gaditana)
AGCGTGGCATCAAATCACGAGCTGAATTGTTCACGTTTATCAAGTCAAGA
ATCTGCCTTGCCCCTCCCAACAAAAGGTGACCAATGAATGCTGCGGCGTT
TTCCAGGATTGTCGCACCCGGCGACTGTCCGTTACGGGCGTCGACTCCAG
CCACACGGTCATACACTCCAGTCTGAAAGCCCAGGAAACCCCACGTCCAT
GCCATCCTGTCGCCCTCTTTCTTCATCTGCCCTTTTGCCGCGTCCATTTC
GTGTCTTGGGCTTGCAGCAAGTGGCCATCGGCGCGTTGGACAAGTCAGGG
CCATGCAGATTATGGGGCGATGTCCTCGGCGTTCCCATGACCGGCACGTA
TAAAAGCGAGTTGGAAAACGTTGATGAAGACATCTTCCGTGTTGGCGCTC
CGGACTGCCCGTGGGCTGTTGAAATCGATTTAATGCAACCCATCGACCCC
GCTAAGGCGCCTAAAGTGCACGTTCCAGCTCTCAACCACATTGGCCTCTG
GGTTCACCCTTTGACAGCCGCGGTGGAATACCTTTCCAAGCAAGGTGTGC
GTTTTACACCAGGTGGAATCCGACGTGGCGCCGCTGGGCACGACGTCTGT
TTCATTCATCCGAAAGGCAACGAGAAAAGCCCCTTGTCAGGGGAGGGGGT
TTTGATAGAGCTCGTGCAGGCCCCCCCGGAGGTCGTGAGAGCGTACGAAA
GCGCCAGCGTGGCATCAAATCACGAGCTGAATTGTTCACGTTTATCAAGT
CAAGAATCTGCCTTGCCCCTCCCAACAAAAGGTGACCAATGAATGCTGCG
GCGTTTTCCAGGATTGTCGCACCCGGCGACTGTCCGTTACGGGCGTCGAC
TCCAGCCACACGGTCATACACTCCAGTCTGAAAGCCCAGGAAACCCCACG
TCCATGCCATCCTGTCGCCCTCTTTCTTCATCTGCCCTTTTGCCGCGTCC
ATTTCGTGTCTTGGGCTTGCAGCAAGTGGCCATCGGCGCGTTGGACAAGT
CAGGGCCATGCAGATTATGGGGCGATGTCCTCGGCGTTCCCATGACCGGC
ACGTATAAAAGCGAGTTGGAAAACGTTGATGAAGACATCTTCCGTGTTGG
CGCTCCGGACTGCCCGTGGGCTGTTGAAATCGATTTAATGCAACCCATCG
ACCCCGCTAAGGCGCCTAAAGTGCACGTTCCAGCTCTCAACCACATTGGC
CTCTGGGTTCACCCTTTGACAGCCGCGGTGGAATACCTTTCCAAGCAAGG
TGTGCGTTTTACACCAGGTGGAATCCGACGTGGCGCCGCTGGGCACGACG
TCTGTTTCATTCATCCGAAAGGCAACGAGAAAAGCCCCTTGTCAGGGGAG
GGGGTTTTGATAGAGCTCGTGCAGGCCCCCCCGGAGGTCGTGAGAGCGTA
CGAAAGCGCC
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Synonyms
Publications