EWM23995.1, cds6644 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23995.1 vs. NCBI_GenBank
Match: gi|585105282|gb|EWM23995.1| (lactoylglutathione lyase [Nannochloropsis gaditana]) HSP 1 Score: 478.019 bits (1229), Expect = 1.233e-170 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
Query: 1 MLRRFPGLSHPATVRYGRRLQPHGHTLQSESPGNPTSMPSCRPLSSSALLPRPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYESASVASNHELNCSRLSSQESALPLPTKGDQ 234
MLRRFPGLSHPATVRYGRRLQPHGHTLQSESPGNPTSMPSCRPLSSSALLPRPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYESASVASNHELNCSRLSSQESALPLPTKGDQ
Sbjct: 1 MLRRFPGLSHPATVRYGRRLQPHGHTLQSESPGNPTSMPSCRPLSSSALLPRPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYESASVASNHELNCSRLSSQESALPLPTKGDQ 234
BLAST of EWM23995.1 vs. NCBI_GenBank
Match: gi|553184483|ref|XP_005854094.1| (lactoylglutathione lyase [Nannochloropsis gaditana CCMP526] >gi|422294962|gb|EKU22261.1| lactoylglutathione lyase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 347.821 bits (891), Expect = 6.049e-120 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
Query: 38 MPSCRPLSSSALLPRPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYESA 206
MPSCRPLSSSALLPRPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYESA
Sbjct: 1 MPSCRPLSSSALLPRPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYESA 169
BLAST of EWM23995.1 vs. NCBI_GenBank
Match: gi|880921421|ref|WP_048676775.1| (VOC family protein [Candidatus Competibacter denitrificans] >gi|590102128|emb|CDI04529.1| conserved hypothetical protein [Candidatus Competibacter denitrificans Run_A_D11]) HSP 1 Score: 229.95 bits (585), Expect = 9.478e-74 Identity = 106/156 (67.95%), Postives = 130/156 (83.33%), Query Frame = 0
Query: 52 RPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYESAS 207
RPF+VLG+QQ+AIG LDK+ RLW D LG+ MTG ++SE ENVDEDI +G+ P+ VE+DLMQPIDPAKAPKVH P LNHIGLW+ L AAVE+L+ +G+RFTPGGIR+GAAG+DVCF+HPKGNE +PLSGEGVLIEL+QAPPEV+ A+ +
Sbjct: 4 RPFKVLGIQQIAIGGLDKTKLSRLWVDTLGLTMTGNFRSERENVDEDIAAIGS--GPFKVEVDLMQPIDPAKAPKVHEPQLNHIGLWISDLKAAVEWLTTKGMRFTPGGIRKGAAGYDVCFLHPKGNEATPLSGEGVLIELIQAPPEVIEAFAKVA 157
BLAST of EWM23995.1 vs. NCBI_GenBank
Match: gi|223997534|ref|XP_002288440.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220975548|gb|EED93876.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 225.328 bits (573), Expect = 5.716e-71 Identity = 106/151 (70.20%), Postives = 121/151 (80.13%), Query Frame = 0
Query: 52 RPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRA 202
+PF+VLGLQQ+AIG+LD S LW D+ GV G +KSE ENVDEDI R+G P AVEIDLM PIDP K+PKVHVP+LNHIGLWV L AAVE+++ QGVRFTPGGIR+GAAGHDV FIHPKGNEKSP+ G GVLIELVQAP V+ A
Sbjct: 67 KPFQVLGLQQIAIGSLDNSSLSHLWCDIFGVSKIGNFKSEKENVDEDILRLGKEGSPHAVEIDLMMPIDPEKSPKVHVPSLNHIGLWVDDLPAAVEWMANQGVRFTPGGIRKGAAGHDVTFIHPKGNEKSPIGGGGVLIELVQAPQNVIDA 217
BLAST of EWM23995.1 vs. NCBI_GenBank
Match: gi|736412798|ref|WP_034435298.1| (VOC family protein [Candidatus Contendobacter odensis] >gi|577001058|emb|CDH46607.1| Lactoylglutathione lyase [Candidatus Contendobacter odensis Run_B_J11]) HSP 1 Score: 221.861 bits (564), Expect = 1.344e-70 Identity = 101/156 (64.74%), Postives = 128/156 (82.05%), Query Frame = 0
Query: 52 RPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYESAS 207
RPF+VLG+QQ+AIG LDK+ +LW D LG+ +TG ++SE ENVDEDI +G+ P+ VE+DLMQPIDP KAPKVH P LNHIGLW+ L AAVE+L+ +G+RFTPGGIR+GAAG+DVCF+HPKGN+ +PL GEGVLIEL+QAPPEV+ A+ +
Sbjct: 4 RPFKVLGIQQIAIGGLDKTKLSKLWIDTLGLTLTGNFRSERENVDEDIAAIGS--GPFKVEVDLMQPIDPTKAPKVHEPQLNHIGLWISDLAAAVEWLTAKGMRFTPGGIRKGAAGYDVCFLHPKGNDATPLCGEGVLIELIQAPPEVIEAFAKVA 157
BLAST of EWM23995.1 vs. NCBI_GenBank
Match: gi|655492564|ref|WP_028873974.1| (VOC family protein [Tepidiphilus margaritifer]) HSP 1 Score: 221.476 bits (563), Expect = 2.350e-70 Identity = 104/159 (65.41%), Postives = 129/159 (81.13%), Query Frame = 0
Query: 51 PRPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYESASVA 209
PRPFR+LG+QQ+A+GALDK+ RLW ++ G+P+TGT++SE ENVDEDI +GA P+ VE+DLMQP+DP K P VH LNH+GLWV L AVE+LS GVRF PGGIRRGAAG+D+CFIHPKGN++ P+SGEGVLIELVQAPPEV+ AY + + A
Sbjct: 5 PRPFRILGIQQIALGALDKTRLARLWVELFGLPVTGTFRSERENVDEDIVALGA--GPFKVEVDLMQPLDPEKKPAVHATPLNHVGLWVDDLPKAVEWLSAHGVRFAPGGIRRGAAGYDICFIHPKGNDEFPVSGEGVLIELVQAPPEVIEAYATIAAA 161
BLAST of EWM23995.1 vs. NCBI_GenBank
Match: gi|397592111|gb|EJK55585.1| (hypothetical protein THAOC_24674 [Thalassiosira oceanica]) HSP 1 Score: 217.624 bits (553), Expect = 2.672e-68 Identity = 109/171 (63.74%), Postives = 127/171 (74.27%), Query Frame = 0
Query: 36 TSMPSCRPLSSSALLP--RPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYE 204
TS+ S P + P RPFRV+GLQQVAIG +K+ LW VLGVP G Y+SE ENVDEDI +G CP AVE+DLM P+D K+PKV+VP LNHIGLWV L AVE+L +GVRFTPGGIR+GA+GHDV FIHPKGNE +P+ GEGVLIELVQAPPEV+ A E
Sbjct: 23 TSIASATPHRQQSGQPTERPFRVIGLQQVAIGGRNKTSLSNLWTTVLGVPKVGDYRSERENVDEDILLLGREGCPHAVEVDLMMPLDETKSPKVNVPPLNHIGLWVDRLPEAVEWLEGRGVRFTPGGIRKGASGHDVTFIHPKGNEVTPIGGEGVLIELVQAPPEVIEASE 193
BLAST of EWM23995.1 vs. NCBI_GenBank
Match: gi|750191050|ref|WP_040495124.1| (VOC family protein [Ilumatobacter nonamiensis]) HSP 1 Score: 215.698 bits (548), Expect = 3.695e-68 Identity = 107/159 (67.30%), Postives = 124/159 (77.99%), Query Frame = 0
Query: 44 LSSSALLPRPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRA 202
+S S RPFRVLG+QQVAIG LDK LW +LGV G Y +E ENVDEDI R+G+ P AVEIDLMQP+DP APKVHVP LNHIGLW+ L AAV +L++QG+RFTPGGIRRGA+GHDVCF+HPKGNE +P SGEGVLIELVQAP +V+ A
Sbjct: 1 MSESTTTDRPFRVLGIQQVAIGGLDKGALSGLWTGLLGVEKVGDYVAESENVDEDILRLGS--GPHAVEIDLMQPLDPEVAPKVHVPTLNHIGLWIDDLPAAVGWLTEQGMRFTPGGIRRGASGHDVCFLHPKGNEATPRSGEGVLIELVQAPADVIAA 157
BLAST of EWM23995.1 vs. NCBI_GenBank
Match: gi|1173958358|gb|OQS04730.1| (glyoxalase family protein [Thraustotheca clavata]) HSP 1 Score: 216.083 bits (549), Expect = 3.867e-68 Identity = 105/166 (63.25%), Postives = 129/166 (77.71%), Query Frame = 0
Query: 40 SCRPLSSSALLPRPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYES 205
+ R LSSS+ RPFRVLG+QQVA+G L+K LW D LG+ ++KSE ENVDEDI G P+AVE+D+MQPID KAPKVHVP LNH+GLW+ L VE+L+KQG+RFTPGGIR+GAAG+DV FIHPKGNE +PLSGEGVLIELVQAP V++A+++
Sbjct: 5 AVRHLSSSS---RPFRVLGIQQVAVGGLNKGALKNLWVDTLGLTYKSSFKSERENVDEDILEAGK--GPFAVEVDIMQPIDANKAPKVHVPQLNHLGLWIDDLPKCVEHLTKQGMRFTPGGIRKGAAGYDVVFIHPKGNEATPLSGEGVLIELVQAPEHVIKAFDA 165
BLAST of EWM23995.1 vs. NCBI_GenBank
Match: gi|504210166|ref|WP_014397268.1| (VOC family protein [Corallococcus coralloides] >gi|380729847|gb|AFE05849.1| hypothetical protein COCOR_04461 [Corallococcus coralloides DSM 2259]) HSP 1 Score: 213.386 bits (542), Expect = 3.586e-67 Identity = 103/161 (63.98%), Postives = 127/161 (78.88%), Query Frame = 0
Query: 52 RPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYESASVASNH 212
RPFR+LG+QQ+AIG LDK +LW D LG+ GTY+SE ENVDEDI GA P+ VE+DLMQP++P PKVH PALNH+GLWV L AV++L QG+RFTPGGIR+GAAG DVCFIHPK +++ PLSGEGVLIELVQAPPE++RA+E A+ ++ H
Sbjct: 5 RPFRILGIQQIAIGGLDKGALRKLWVDTLGLTAHGTYRSEKENVDEDIVVAGA--GPFKVEVDLMQPVNPDGRPKVHDPALNHVGLWVDDLAVAVKWLEGQGMRFTPGGIRKGAAGFDVCFIHPKASDQFPLSGEGVLIELVQAPPEIIRAFEQAAASAAH 163 The following BLAST results are available for this feature:
BLAST of EWM23995.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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