EWM23995.1, cds6644 (CDS) Nannochloropsis gaditana

Overview
NameEWM23995.1
Unique Namecds6644
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:198116..198733 -
Alignment locationCM002469.1:197935..198021 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23995.1
Productlactoylglutathione lyase
Orig transcript idgnl|cribi|Naga_100040g8.1993.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:198116..198733 -
CM002469.1supercontigCM002469.1:197935..198021 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR029068Glyas_Bleomycin-R_OHBP_Dase
Homology
BLAST of EWM23995.1 vs. NCBI_GenBank
Match: gi|585105282|gb|EWM23995.1| (lactoylglutathione lyase [Nannochloropsis gaditana])

HSP 1 Score: 478.019 bits (1229), Expect = 1.233e-170
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
Query:    1 MLRRFPGLSHPATVRYGRRLQPHGHTLQSESPGNPTSMPSCRPLSSSALLPRPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYESASVASNHELNCSRLSSQESALPLPTKGDQ 234
            MLRRFPGLSHPATVRYGRRLQPHGHTLQSESPGNPTSMPSCRPLSSSALLPRPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYESASVASNHELNCSRLSSQESALPLPTKGDQ
Sbjct:    1 MLRRFPGLSHPATVRYGRRLQPHGHTLQSESPGNPTSMPSCRPLSSSALLPRPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYESASVASNHELNCSRLSSQESALPLPTKGDQ 234          
BLAST of EWM23995.1 vs. NCBI_GenBank
Match: gi|553184483|ref|XP_005854094.1| (lactoylglutathione lyase [Nannochloropsis gaditana CCMP526] >gi|422294962|gb|EKU22261.1| lactoylglutathione lyase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 347.821 bits (891), Expect = 6.049e-120
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
Query:   38 MPSCRPLSSSALLPRPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYESA 206
            MPSCRPLSSSALLPRPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYESA
Sbjct:    1 MPSCRPLSSSALLPRPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYESA 169          
BLAST of EWM23995.1 vs. NCBI_GenBank
Match: gi|880921421|ref|WP_048676775.1| (VOC family protein [Candidatus Competibacter denitrificans] >gi|590102128|emb|CDI04529.1| conserved hypothetical protein [Candidatus Competibacter denitrificans Run_A_D11])

HSP 1 Score: 229.95 bits (585), Expect = 9.478e-74
Identity = 106/156 (67.95%), Postives = 130/156 (83.33%), Query Frame = 0
Query:   52 RPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYESAS 207
            RPF+VLG+QQ+AIG LDK+   RLW D LG+ MTG ++SE ENVDEDI  +G+   P+ VE+DLMQPIDPAKAPKVH P LNHIGLW+  L AAVE+L+ +G+RFTPGGIR+GAAG+DVCF+HPKGNE +PLSGEGVLIEL+QAPPEV+ A+   +
Sbjct:    4 RPFKVLGIQQIAIGGLDKTKLSRLWVDTLGLTMTGNFRSERENVDEDIAAIGS--GPFKVEVDLMQPIDPAKAPKVHEPQLNHIGLWISDLKAAVEWLTTKGMRFTPGGIRKGAAGYDVCFLHPKGNEATPLSGEGVLIELIQAPPEVIEAFAKVA 157          
BLAST of EWM23995.1 vs. NCBI_GenBank
Match: gi|223997534|ref|XP_002288440.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220975548|gb|EED93876.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 225.328 bits (573), Expect = 5.716e-71
Identity = 106/151 (70.20%), Postives = 121/151 (80.13%), Query Frame = 0
Query:   52 RPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRA 202
            +PF+VLGLQQ+AIG+LD S    LW D+ GV   G +KSE ENVDEDI R+G    P AVEIDLM PIDP K+PKVHVP+LNHIGLWV  L AAVE+++ QGVRFTPGGIR+GAAGHDV FIHPKGNEKSP+ G GVLIELVQAP  V+ A
Sbjct:   67 KPFQVLGLQQIAIGSLDNSSLSHLWCDIFGVSKIGNFKSEKENVDEDILRLGKEGSPHAVEIDLMMPIDPEKSPKVHVPSLNHIGLWVDDLPAAVEWMANQGVRFTPGGIRKGAAGHDVTFIHPKGNEKSPIGGGGVLIELVQAPQNVIDA 217          
BLAST of EWM23995.1 vs. NCBI_GenBank
Match: gi|736412798|ref|WP_034435298.1| (VOC family protein [Candidatus Contendobacter odensis] >gi|577001058|emb|CDH46607.1| Lactoylglutathione lyase [Candidatus Contendobacter odensis Run_B_J11])

HSP 1 Score: 221.861 bits (564), Expect = 1.344e-70
Identity = 101/156 (64.74%), Postives = 128/156 (82.05%), Query Frame = 0
Query:   52 RPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYESAS 207
            RPF+VLG+QQ+AIG LDK+   +LW D LG+ +TG ++SE ENVDEDI  +G+   P+ VE+DLMQPIDP KAPKVH P LNHIGLW+  L AAVE+L+ +G+RFTPGGIR+GAAG+DVCF+HPKGN+ +PL GEGVLIEL+QAPPEV+ A+   +
Sbjct:    4 RPFKVLGIQQIAIGGLDKTKLSKLWIDTLGLTLTGNFRSERENVDEDIAAIGS--GPFKVEVDLMQPIDPTKAPKVHEPQLNHIGLWISDLAAAVEWLTAKGMRFTPGGIRKGAAGYDVCFLHPKGNDATPLCGEGVLIELIQAPPEVIEAFAKVA 157          
BLAST of EWM23995.1 vs. NCBI_GenBank
Match: gi|655492564|ref|WP_028873974.1| (VOC family protein [Tepidiphilus margaritifer])

HSP 1 Score: 221.476 bits (563), Expect = 2.350e-70
Identity = 104/159 (65.41%), Postives = 129/159 (81.13%), Query Frame = 0
Query:   51 PRPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYESASVA 209
            PRPFR+LG+QQ+A+GALDK+   RLW ++ G+P+TGT++SE ENVDEDI  +GA   P+ VE+DLMQP+DP K P VH   LNH+GLWV  L  AVE+LS  GVRF PGGIRRGAAG+D+CFIHPKGN++ P+SGEGVLIELVQAPPEV+ AY + + A
Sbjct:    5 PRPFRILGIQQIALGALDKTRLARLWVELFGLPVTGTFRSERENVDEDIVALGA--GPFKVEVDLMQPLDPEKKPAVHATPLNHVGLWVDDLPKAVEWLSAHGVRFAPGGIRRGAAGYDICFIHPKGNDEFPVSGEGVLIELVQAPPEVIEAYATIAAA 161          
BLAST of EWM23995.1 vs. NCBI_GenBank
Match: gi|397592111|gb|EJK55585.1| (hypothetical protein THAOC_24674 [Thalassiosira oceanica])

HSP 1 Score: 217.624 bits (553), Expect = 2.672e-68
Identity = 109/171 (63.74%), Postives = 127/171 (74.27%), Query Frame = 0
Query:   36 TSMPSCRPLSSSALLP--RPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYE 204
            TS+ S  P    +  P  RPFRV+GLQQVAIG  +K+    LW  VLGVP  G Y+SE ENVDEDI  +G   CP AVE+DLM P+D  K+PKV+VP LNHIGLWV  L  AVE+L  +GVRFTPGGIR+GA+GHDV FIHPKGNE +P+ GEGVLIELVQAPPEV+ A E
Sbjct:   23 TSIASATPHRQQSGQPTERPFRVIGLQQVAIGGRNKTSLSNLWTTVLGVPKVGDYRSERENVDEDILLLGREGCPHAVEVDLMMPLDETKSPKVNVPPLNHIGLWVDRLPEAVEWLEGRGVRFTPGGIRKGASGHDVTFIHPKGNEVTPIGGEGVLIELVQAPPEVIEASE 193          
BLAST of EWM23995.1 vs. NCBI_GenBank
Match: gi|750191050|ref|WP_040495124.1| (VOC family protein [Ilumatobacter nonamiensis])

HSP 1 Score: 215.698 bits (548), Expect = 3.695e-68
Identity = 107/159 (67.30%), Postives = 124/159 (77.99%), Query Frame = 0
Query:   44 LSSSALLPRPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRA 202
            +S S    RPFRVLG+QQVAIG LDK     LW  +LGV   G Y +E ENVDEDI R+G+   P AVEIDLMQP+DP  APKVHVP LNHIGLW+  L AAV +L++QG+RFTPGGIRRGA+GHDVCF+HPKGNE +P SGEGVLIELVQAP +V+ A
Sbjct:    1 MSESTTTDRPFRVLGIQQVAIGGLDKGALSGLWTGLLGVEKVGDYVAESENVDEDILRLGS--GPHAVEIDLMQPLDPEVAPKVHVPTLNHIGLWIDDLPAAVGWLTEQGMRFTPGGIRRGASGHDVCFLHPKGNEATPRSGEGVLIELVQAPADVIAA 157          
BLAST of EWM23995.1 vs. NCBI_GenBank
Match: gi|1173958358|gb|OQS04730.1| (glyoxalase family protein [Thraustotheca clavata])

HSP 1 Score: 216.083 bits (549), Expect = 3.867e-68
Identity = 105/166 (63.25%), Postives = 129/166 (77.71%), Query Frame = 0
Query:   40 SCRPLSSSALLPRPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYES 205
            + R LSSS+   RPFRVLG+QQVA+G L+K     LW D LG+    ++KSE ENVDEDI   G    P+AVE+D+MQPID  KAPKVHVP LNH+GLW+  L   VE+L+KQG+RFTPGGIR+GAAG+DV FIHPKGNE +PLSGEGVLIELVQAP  V++A+++
Sbjct:    5 AVRHLSSSS---RPFRVLGIQQVAVGGLNKGALKNLWVDTLGLTYKSSFKSERENVDEDILEAGK--GPFAVEVDIMQPIDANKAPKVHVPQLNHLGLWIDDLPKCVEHLTKQGMRFTPGGIRKGAAGYDVVFIHPKGNEATPLSGEGVLIELVQAPEHVIKAFDA 165          
BLAST of EWM23995.1 vs. NCBI_GenBank
Match: gi|504210166|ref|WP_014397268.1| (VOC family protein [Corallococcus coralloides] >gi|380729847|gb|AFE05849.1| hypothetical protein COCOR_04461 [Corallococcus coralloides DSM 2259])

HSP 1 Score: 213.386 bits (542), Expect = 3.586e-67
Identity = 103/161 (63.98%), Postives = 127/161 (78.88%), Query Frame = 0
Query:   52 RPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYESASVASNH 212
            RPFR+LG+QQ+AIG LDK    +LW D LG+   GTY+SE ENVDEDI   GA   P+ VE+DLMQP++P   PKVH PALNH+GLWV  L  AV++L  QG+RFTPGGIR+GAAG DVCFIHPK +++ PLSGEGVLIELVQAPPE++RA+E A+ ++ H
Sbjct:    5 RPFRILGIQQIAIGGLDKGALRKLWVDTLGLTAHGTYRSEKENVDEDIVVAGA--GPFKVEVDLMQPVNPDGRPKVHDPALNHVGLWVDDLAVAVKWLEGQGMRFTPGGIRKGAAGFDVCFIHPKASDQFPLSGEGVLIELVQAPPEIIRAFEQAAASAAH 163          
The following BLAST results are available for this feature:
BLAST of EWM23995.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105282|gb|EWM23995.1|1.233e-170100.00lactoylglutathione lyase [Nannochloropsis gaditana... [more]
gi|553184483|ref|XP_005854094.1|6.049e-120100.00lactoylglutathione lyase [Nannochloropsis gaditana... [more]
gi|880921421|ref|WP_048676775.1|9.478e-7467.95VOC family protein [Candidatus Competibacter denit... [more]
gi|223997534|ref|XP_002288440.1|5.716e-7170.20predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|736412798|ref|WP_034435298.1|1.344e-7064.74VOC family protein [Candidatus Contendobacter oden... [more]
gi|655492564|ref|WP_028873974.1|2.350e-7065.41VOC family protein [Tepidiphilus margaritifer][more]
gi|397592111|gb|EJK55585.1|2.672e-6863.74hypothetical protein THAOC_24674 [Thalassiosira oc... [more]
gi|750191050|ref|WP_040495124.1|3.695e-6867.30VOC family protein [Ilumatobacter nonamiensis][more]
gi|1173958358|gb|OQS04730.1|3.867e-6863.25glyoxalase family protein [Thraustotheca clavata][more]
gi|504210166|ref|WP_014397268.1|3.586e-6763.98VOC family protein [Corallococcus coralloides] >gi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6660rna6660Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications