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Properties
| Property Name | Value |
|---|
| Product | glucose-methanol-choline oxidoreductase |
| Orig transcript id | gnl|cribi|Naga_100040g2.2001.mrna |
| Orig protein id | gnl|cribi|Naga_100040g2.2001 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:184726..187032 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6654 ID=rna6654|Name=rna6654|organism=Nannochloropsis gaditana|type=mRNA|length=2349bp
ATGCCTTCTTTGCTCGAAATCGAAGAGAAGCTCAAAGCGGCGGACAAGGG
CGACCTGTTGGACTTTCGGATGGACGGCGGCATGTCCGTGCAGGTCTTTG
AAGGCCAGGACTACTCCAAGAAACCCGGCAAGGAAACATTCACTGGCCTC
CCGCAGCTACAGATGTTCGACATTGGAAAACGCGAACGCCGGCCGACCCA
GAGCAACCTGAACGAGGGGGCTCTTTTGAAGCGTATGGCGGTGGATGGGA
AGATTGGCAACAGGGGAAAACACATGAAGCTCCCCAAACAGCTGCGGCTT
CCTAGGATCGATGACGTCTGGACTTTCTACGATCGGGAGCGGTTACGGGA
GCTGCAGAAGATGGAAGAAGATCGGTATAGGGAGCTCAAGAACAACGACG
CCCTCCCGAGTGACCCCGCCGAGTGGGAGCTCTTGACCCCGGTTTTGGCG
GAGGAAAAGGCGCGACTGTTGAGCGAAGGCTTTGGGGACTGGAGCCGTAA
TCATTTCAACCTGTTTTGTCGGGCGAGCGCGAAGTATGGCCGGACCTCGT
ACGAGAAGATTGCGGGGGAGATTGGCAAGACGGAAGAGGAAGTGCAGCGA
TACGCCGAGGTGTTCTGGCGCAAAGGGGAGGAGGTTCTGAGTGATGGGGA
ATGGAAGAAGGTGGTGACTGCCATTGAGAAAGGGGAAAAAAAACTGGAGG
AGATTGCTCGCTTGACCAAAGCAACACAGGAGCTTCTCTCCCGTTTCAAA
AACCCCTGGGAGGAGCTTTCATTCCATTACATCGGGCAGCAAGGGAAGGA
GCGCATTTACTCCACAGAGGAAGATAGGTACCTCCTCTGTTTTACAAACC
ACTACGGGTACGGCAATTGGGAGGATGTCCGCATGGCCATCCGTCGCTGC
GACCGGTTTCGATTTGATTACTTCCTGCGCTCCTGCACGGCGGACAACCT
TGGCAAGCGCTGTGAACAGCTGATGCGTGCCGCTGAGAAGGAAAATATCG
AATATGAAAAGAAACGACTGGCGGTGGAGGATGGCCGCCGGAGGGAGAAA
GAAGATCGGTCGGTGGAGGATGCTAGACGCATCAAGGACGATGAGGAACG
CAAGGCTCGGATCACGGAGTTGGATGCCAAGCTGGGCGAGGAGGAAGGCC
GTCTGCAGGAATTTGCCGACGCCAAAAAAGCCGCGGAAATGCGCCTACAG
CTCCTGAAAGGCCTCAAGGTGAGCTCAAACGGTGGCCTTGCGCTGGACGG
AATCGGGTCGTCTGCTTCACTTGGAGGAGGGGGAGGGGTCGGTGGAGGGA
AAGGCACCGCGCCCAAGACGGTTCCTGAGGAGTTGGTGCCGGAGCTAGCC
ATGATGGTCGTGCGGGCGGGGGCGGACGGGGTCACCAAGATTGTCGCTGA
GTTCCACGGAAAGTATGCCAAGGATGGAGTGAGCAAGCGACAGATCGAGA
TGAAGATAAACGAGATTGCGGTCAAGGAACGGCGGGAGGAGGACGCGAGA
CCCATTTGGCACCTGAGGGACGATTTTACCCACTTGGTCAAAGGGCGAAA
GGCCAGGAACGCCGTCACGCTGTACCTTGTCGACCACAAAGAGCAAGTGA
AACGGGAGCTGGGGGCTGCAGCCACGAACGAGAATATCAAGAGTCGAATC
AAGGCCTTGTGGAGAGGGGAAGCACCTCACGTCAAGGATAAGTATACGGC
GCGGGCGCGCGAGGAGGAGGCTCGGTACGACCGGGAAATGAATCTCTACC
AGACTCTCTTGGCCCAAGAAGAGAAGAAGAAAGCCACGGCGGCCCCCGAG
GCGTCTACGAACCCTTCGACCACTTCGTCGGTGCGTTCGAGTGGCCAAGG
CCCGTCTCACTCGCAAACGGCGCGAGTGGATTCAGGGGCAGGTGGAGGAG
GCGGCGAAGAGGAGTACCACATCCCCAAGAAGACGGCAGCTGCCCAAGCG
ACCACAGCTCCGCCCAAAGAGGAAGATCCAGCCGCCATGGAGCAGGAGAA
GCACCAGCAAGAGCCACAGCACCATCAAGGGGCATTGTCCCCGAAGCAAG
ATGAGGTACCTTATGAGCCGCAGCAGACTCAGCCAACAAGGAATTGTCGG
TCAGGAGGTCGGTCCTTTTTATGGCAGTGCACTCTGAGTGAGGCAGTTGT
TTCTCTCGAGAAGTGCACCCCTCAGACGGCGAAAGAAAAAAGGATCATGA
CAGGTCACGCTTTCAAGCTTGGTTGGACAGGAAAGGGATATATAGCTGAA
AAGGAATATGTGGGTGGACATGATATCCGTGAGATAAGCATGAAGGAAGG
GGAGAGGGGGAAAGTGTATGCGGCGACGTTGATTTGGTTTCCATATTGA back to topprotein sequence of rna6654 >rna6654-protein ID=rna6654-protein|Name=rna6654|organism=Nannochloropsis gaditana|type=polypeptide|length=446bp
MVWTWGDRQDWELIDLEGWSFEDVYPYFLKSENYTGASSAYRHAVARGHA
GPITLTSFPANEATLTAVSTAAETFNVPPEVDNNGGVHESVAVVQRDFQG
PTIDTGVRMGAFMAYLRPAMASLPPERLRVLTRATVLQVLVEPSEETGRE
GGLEAVGVRFLHDGVCGEAYAKREVVLAAGAYNTPKLLLLSGIGDPGHLE
EIGIECVLSLPGVGKRLVDHINPGSLMFTGPPRKDYDANIVATYTRTGIV
PDLTPDVELGFIMGPPVEEPAHWDKVPSLYVFYALWLLHDGVGSVRLKNR
DPLEDPVIVSGYLKTATDLKRLVRIFRMLIEWSQTFARSSGLKLEQQRSG
GNAIFVTEDSSDEEILKAARMVLSTHWHAAQSCRMGNPEHDPDAVVDPEF
KVVGMEKLRVVDASSQPVLTNGHPMAALVMMAERAVDFMLGKAKER back to topmRNA from alignment at CM002469.1:184726..187032- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6654 ID=rna6654|Name=rna6654|organism=Nannochloropsis gaditana|type=mRNA|length=2307bp|location=Sequence derived from alignment at CM002469.1:184726..187032- (Nannochloropsis gaditana)
TTTCACCCCTGGCCTCGAATTACCACGCTCATCCGTGCAGGCTCGATCAT
GCTTGTCGGCCTTTGACTCACTGCACGCAACCTTTCTCCTCTTCTCCATT
GCCAGAACGGGGCGAGCGAGTCCTCCTGATCGAGACCGGGGAGGACGAAC
ACCTGAACCCCCTTACGCGCTGGGGGTACTTTTTCCCCTCAGGCTCCTAT
TCCCACCTGTATCGGAATTATTTCACGGAACCGGAGCCAAGAGTGAACAA
TCGCAGGCTTTACCACCAGGCTGCCAAAGCCTTGGGAGGAGGAACGGCGG
TGAACGCCATGGGTAAGTGGAAGGCGCTCGCCAAGGATGAGGGGATGGAG
GAGAGGGAAGGGAAAAGAATTCGCCACGTGCGCATAGGACAGATACGTCC
ACTTTAATCCGCACCATGCTGACGCGACCGACACCCTGCAGCCTCACACC
GTAGCTCCCTCGCTCATCCTCTCAACCTCTTTCCCCCAGTATGGACGTGG
GGGGACCGTCAGGACTGGGAGCTCATCGACTTGGAGGGCTGGTCCTTCGA
GGACGTCTATCCCTATTTCCTCAAGTCTGAAAACTACACGGGGGCGTCCT
CCGCCTACCGCCACGCCGTGGCCCGGGGGCACGCCGGTCCCATAACCCTG
ACCAGCTTTCCCGCCAACGAGGCCACCCTAACGGCCGTCTCCACGGCGGC
AGAGACCTTCAACGTTCCTCCCGAAGTAGACAACAATGGTGGTGTGCACG
AAAGCGTGGCGGTCGTGCAACGGGATTTCCAGGGGCCCACCATCGACACG
GGCGTGCGGATGGGCGCCTTCATGGCCTACCTGCGTCCTGCCATGGCCTC
TCTCCCCCCCGAGCGCCTCCGAGTCTTGACACGCGCAACGGTCTTGCAGG
TGCTGGTAGAACCCTCAGAGGAGACGGGGAGGGAGGGAGGGCTGGAGGCG
GTGGGCGTGCGCTTCCTCCACGACGGGGTCTGCGGGGAGGCCTATGCGAA
GAGGGAGGTGGTCCTGGCCGCCGGGGCCTACAACACGCCTAAGCTCTTGC
TCTTGTCCGGGATCGGAGATCCAGGCCATTTGGAGGAGATCGGGATCGAG
TGCGTCCTGAGCCTCCCTGGGGTGGGGAAACGCCTGGTTGACCACATCAA
CCCGGGCTCCCTCATGTTCACCGGCCCCCCCCGCAAGGATTACGACGCCA
ACATCGTGGCGACCTACACGCGGACGGGCATCGTGCCGGACCTGACGCCA
GACGTGGAGTTGGGATTCATCATGGGCCCACCGGTGGAGGAGCCAGCGCA
TTGGGACAAGGTCCCCTCCCTTTACGTCTTCTACGCGCTCTGGCTCTTGC
ACGACGGCGTGGGCTCGGTCCGTTTGAAAAATCGAGACCCCTTGGAGGAC
CCGGTCATCGTCTCCGGGTATTTGAAGACCGCCACGGACTTGAAGAGGCT
GGTGCGGATTTTTCGTATGCTCATTGAGTGGTCTCAGACTTTTGCGCGTT
CGTCGGGGTTGAAACTGGAGCAGCAGCGATCGGGGGGGAACGCTATTTTT
GTTACAGAAGACAGCAGTGACGAGGAGATTCTCAAAGCGGCGCGCATGGT
CCTATCCACACACTGGCACGCCGCTCAGTCCTGCAGAATGGGAAACCCCG
AGCACGACCCGGATGCGGTGGTGGACCCGGAGTTCAAGGTGGTGGGGATG
GAGAAGCTAAGGGTAGTGGACGCCTCCTCCCAGCCCGTCCTGACTAACGG
ACACCCAATGGCAGCTTTGGTGATGATGGCCGAGCGGGCAGTCGATTTTA
TGTTGGGGAAGGCAAAGGAAAGATAGCAAGACGAAAATGGTGAGCGAAAC
GATGTGCTCGGGGAGACGGGTGTGGCGGAGGATGTCTGCACTTTTTGGCT
ACGTGCATTGGGAGAATGAGGGAGGCGACGGGGCAAAGTCACCTTGTTGA
AAAGAAAGGGAGCGTTGTGTAGAAGATGCGGAACGGAGTGGAACCGGAGG
AAACATGGGCGGAGGACAAGCACCACGCGTGGGGTCGCACAGACTGGCGC
CAGATTTAACATACATGTGCGTGTGCGGACATAGCACGGCGTGATGCCGA
ATAGAACGATCTGGGAGCGAAAAAGAGACTCAAGGCGATAGGCTGCTACT
TGATTTTTCATCTCCCTCCAGCCGAGCCCGATATCAGGCTCACTCAATGC
CATGCGTTCTTTCTAAATCCATTCCCTTCTTACGGTCCTTCGTACATGAC
TGTCACTCTTTCCCCTCGACGGTCAGCGTCCTTTCCTCACTTGACTCAAT
ATGGAAA back to topCoding sequence (CDS) from alignment at CM002469.1:184726..187032- >rna6654 ID=rna6654|Name=rna6654|organism=Nannochloropsis gaditana|type=CDS|length=2682bp|location=Sequence derived from alignment at CM002469.1:184726..187032- (Nannochloropsis gaditana)
TATGGACGTGGGGGGACCGTCAGGACTGGGAGCTCATCGACTTGGAGGGC
TGGTCCTTCGAGGACGTCTATCCCTATTTCCTCAAGTCTGAAAACTACAC
GGGGGCGTCCTCCGCCTACCGCCACGCCGTGGCCCGGGGGCACGCCGGTC
CCATAACCCTGACCAGCTTTCCCGCCAACGAGGCCACCCTAACGGCCGTC
TCCACGGCGGCAGAGACCTTCAACGTTCCTCCCGAAGTAGACAACAATGG
TGGTGTGCACGAAAGCGTGGCGGTCGTGCAACGGGATTTCCAGGGGCCCA
CCATCGACACGGGCGTGCGGATGGGCGCCTTCATGGCCTACCTGCGTCCT
GCCATGGCCTCTCTCCCCCCCGAGCGCCTCCGAGTCTTGACACGCGCAAC
GGTCTTGCAGGTGCTGGTAGAACCCTCAGAGGAGACGGGGAGGGAGGGAG
GGCTGGAGGCGGTGGGCGTGCGCTTCCTCCACGACGGGGTCTGCGGGGAG
GCCTATGCGAAGAGGGAGGTGGTCCTGGCCGCCGGGGCCTACAACACGCC
TAAGCTCTTGCTCTTGTCCGGGATCGGAGATCCAGGCCATTTGGAGGAGA
TCGGGATCGAGTGCGTCCTGAGCCTCCCTGGGGTGGGGAAACGCCTGGTT
GACCACATCAACCCGGGCTCCCTCATGTTCACCGGCCCCCCCCGCAAGGA
TTACGACGCCAACATCGTGGCGACCTACACGCGGACGGGCATCGTGCCGG
ACCTGACGCCAGACGTGGAGTTGGGATTCATCATGGGCCCACCGGTGGAG
GAGCCAGCGCATTGGGACAAGGTCCCCTCCCTTTACGTCTTCTACGCGCT
CTGGCTCTTGCACGACGGCGTGGGCTCGGTCCGTTTGAAAAATCGAGACC
CCTTGGAGGACCCGGTCATCGTCTCCGGGTATTTGAAGACCGCCACGGAC
TTGAAGAGGCTGGTGCGGATTTTTCGTATGCTCATTGAGTGGTCTCAGAC
TTTTGCGCGTTCGTCGGGGTTGAAACTGGAGCAGCAGCGATCGGGGGGGA
ACGCTATTTTTGTTACAGAAGACAGCAGTGACGAGGAGATTCTCAAAGCG
GCGCGCATGGTCCTATCCACACACTGGCACGCCGCTCAGTCCTGCAGAAT
GGGAAACCCCGAGCACGACCCGGATGCGGTGGTGGACCCGGAGTTCAAGG
TGGTGGGGATGGAGAAGCTAAGGGTAGTGGACGCCTCCTCCCAGCCCGTC
CTGACTAACGGACACCCAATGGCAGCTTTGGTGATGATGGCCGAGCGGGC
AGTCGATTTTATGTTGGGGAAGGCAAAGGAAAGATAGATGGTATGGACGT
GGGGGGACCGTCAGGACTGGGAGCTCATCGACTTGGAGGGCTGGTCCTTC
GAGGACGTCTATCCCTATTTCCTCAAGTCTGAAAACTACACGGGGGCGTC
CTCCGCCTACCGCCACGCCGTGGCCCGGGGGCACGCCGGTCCCATAACCC
TGACCAGCTTTCCCGCCAACGAGGCCACCCTAACGGCCGTCTCCACGGCG
GCAGAGACCTTCAACGTTCCTCCCGAAGTAGACAACAATGGTGGTGTGCA
CGAAAGCGTGGCGGTCGTGCAACGGGATTTCCAGGGGCCCACCATCGACA
CGGGCGTGCGGATGGGCGCCTTCATGGCCTACCTGCGTCCTGCCATGGCC
TCTCTCCCCCCCGAGCGCCTCCGAGTCTTGACACGCGCAACGGTCTTGCA
GGTGCTGGTAGAACCCTCAGAGGAGACGGGGAGGGAGGGAGGGCTGGAGG
CGGTGGGCGTGCGCTTCCTCCACGACGGGGTCTGCGGGGAGGCCTATGCG
AAGAGGGAGGTGGTCCTGGCCGCCGGGGCCTACAACACGCCTAAGCTCTT
GCTCTTGTCCGGGATCGGAGATCCAGGCCATTTGGAGGAGATCGGGATCG
AGTGCGTCCTGAGCCTCCCTGGGGTGGGGAAACGCCTGGTTGACCACATC
AACCCGGGCTCCCTCATGTTCACCGGCCCCCCCCGCAAGGATTACGACGC
CAACATCGTGGCGACCTACACGCGGACGGGCATCGTGCCGGACCTGACGC
CAGACGTGGAGTTGGGATTCATCATGGGCCCACCGGTGGAGGAGCCAGCG
CATTGGGACAAGGTCCCCTCCCTTTACGTCTTCTACGCGCTCTGGCTCTT
GCACGACGGCGTGGGCTCGGTCCGTTTGAAAAATCGAGACCCCTTGGAGG
ACCCGGTCATCGTCTCCGGGTATTTGAAGACCGCCACGGACTTGAAGAGG
CTGGTGCGGATTTTTCGTATGCTCATTGAGTGGTCTCAGACTTTTGCGCG
TTCGTCGGGGTTGAAACTGGAGCAGCAGCGATCGGGGGGGAACGCTATTT
TTGTTACAGAAGACAGCAGTGACGAGGAGATTCTCAAAGCGGCGCGCATG
GTCCTATCCACACACTGGCACGCCGCTCAGTCCTGCAGAATGGGAAACCC
CGAGCACGACCCGGATGCGGTGGTGGACCCGGAGTTCAAGGTGGTGGGGA
TGGAGAAGCTAAGGGTAGTGGACGCCTCCTCCCAGCCCGTCCTGACTAAC
GGACACCCAATGGCAGCTTTGGTGATGATGGCCGAGCGGGCAGTCGATTT
TATGTTGGGGAAGGCAAAGGAAAGATAGATGG back to top
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