EWM24003.1, cds6638 (CDS) Nannochloropsis gaditana

Overview
NameEWM24003.1
Unique Namecds6638
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:186721..186724 -
Alignment locationCM002469.1:185207..186543 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24003.1
Productglucose-methanol-choline oxidoreductase
Orig transcript idgnl|cribi|Naga_100040g2.2001.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:186721..186724 -
CM002469.1supercontigCM002469.1:185207..186543 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
GO:0050660flavin adenine dinucleotide binding
GO:0016614oxidoreductase activity, acting on CH-OH group of donors
Vocabulary: INTERPRO
TermDefinition
IPR007867GMC_OxRtase_C
IPR000172GMC_OxRdtase_N
Homology
BLAST of EWM24003.1 vs. NCBI_GenBank
Match: gi|553183950|ref|XP_005854000.1| (choline dehydrogenase [Nannochloropsis gaditana CCMP526] >gi|422295062|gb|EKU22361.1| choline dehydrogenase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 916.761 bits (2368), Expect = 0.000e+0
Identity = 446/446 (100.00%), Postives = 446/446 (100.00%), Query Frame = 0
Query:    1 MVWTWGDRQDWELIDLEGWSFEDVYPYFLKSENYTGASSAYRHAVARGHAGPITLTSFPANEATLTAVSTAAETFNVPPEVDNNGGVHESVAVVQRDFQGPTIDTGVRMGAFMAYLRPAMASLPPERLRVLTRATVLQVLVEPSEETGREGGLEAVGVRFLHDGVCGEAYAKREVVLAAGAYNTPKLLLLSGIGDPGHLEEIGIECVLSLPGVGKRLVDHINPGSLMFTGPPRKDYDANIVATYTRTGIVPDLTPDVELGFIMGPPVEEPAHWDKVPSLYVFYALWLLHDGVGSVRLKNRDPLEDPVIVSGYLKTATDLKRLVRIFRMLIEWSQTFARSSGLKLEQQRSGGNAIFVTEDSSDEEILKAARMVLSTHWHAAQSCRMGNPEHDPDAVVDPEFKVVGMEKLRVVDASSQPVLTNGHPMAALVMMAERAVDFMLGKAKER 446
            MVWTWGDRQDWELIDLEGWSFEDVYPYFLKSENYTGASSAYRHAVARGHAGPITLTSFPANEATLTAVSTAAETFNVPPEVDNNGGVHESVAVVQRDFQGPTIDTGVRMGAFMAYLRPAMASLPPERLRVLTRATVLQVLVEPSEETGREGGLEAVGVRFLHDGVCGEAYAKREVVLAAGAYNTPKLLLLSGIGDPGHLEEIGIECVLSLPGVGKRLVDHINPGSLMFTGPPRKDYDANIVATYTRTGIVPDLTPDVELGFIMGPPVEEPAHWDKVPSLYVFYALWLLHDGVGSVRLKNRDPLEDPVIVSGYLKTATDLKRLVRIFRMLIEWSQTFARSSGLKLEQQRSGGNAIFVTEDSSDEEILKAARMVLSTHWHAAQSCRMGNPEHDPDAVVDPEFKVVGMEKLRVVDASSQPVLTNGHPMAALVMMAERAVDFMLGKAKER
Sbjct:  132 MVWTWGDRQDWELIDLEGWSFEDVYPYFLKSENYTGASSAYRHAVARGHAGPITLTSFPANEATLTAVSTAAETFNVPPEVDNNGGVHESVAVVQRDFQGPTIDTGVRMGAFMAYLRPAMASLPPERLRVLTRATVLQVLVEPSEETGREGGLEAVGVRFLHDGVCGEAYAKREVVLAAGAYNTPKLLLLSGIGDPGHLEEIGIECVLSLPGVGKRLVDHINPGSLMFTGPPRKDYDANIVATYTRTGIVPDLTPDVELGFIMGPPVEEPAHWDKVPSLYVFYALWLLHDGVGSVRLKNRDPLEDPVIVSGYLKTATDLKRLVRIFRMLIEWSQTFARSSGLKLEQQRSGGNAIFVTEDSSDEEILKAARMVLSTHWHAAQSCRMGNPEHDPDAVVDPEFKVVGMEKLRVVDASSQPVLTNGHPMAALVMMAERAVDFMLGKAKER 577          
BLAST of EWM24003.1 vs. NCBI_GenBank
Match: gi|585105290|gb|EWM24003.1| (glucose-methanol-choline oxidoreductase [Nannochloropsis gaditana])

HSP 1 Score: 914.835 bits (2363), Expect = 0.000e+0
Identity = 446/446 (100.00%), Postives = 446/446 (100.00%), Query Frame = 0
Query:    1 MVWTWGDRQDWELIDLEGWSFEDVYPYFLKSENYTGASSAYRHAVARGHAGPITLTSFPANEATLTAVSTAAETFNVPPEVDNNGGVHESVAVVQRDFQGPTIDTGVRMGAFMAYLRPAMASLPPERLRVLTRATVLQVLVEPSEETGREGGLEAVGVRFLHDGVCGEAYAKREVVLAAGAYNTPKLLLLSGIGDPGHLEEIGIECVLSLPGVGKRLVDHINPGSLMFTGPPRKDYDANIVATYTRTGIVPDLTPDVELGFIMGPPVEEPAHWDKVPSLYVFYALWLLHDGVGSVRLKNRDPLEDPVIVSGYLKTATDLKRLVRIFRMLIEWSQTFARSSGLKLEQQRSGGNAIFVTEDSSDEEILKAARMVLSTHWHAAQSCRMGNPEHDPDAVVDPEFKVVGMEKLRVVDASSQPVLTNGHPMAALVMMAERAVDFMLGKAKER 446
            MVWTWGDRQDWELIDLEGWSFEDVYPYFLKSENYTGASSAYRHAVARGHAGPITLTSFPANEATLTAVSTAAETFNVPPEVDNNGGVHESVAVVQRDFQGPTIDTGVRMGAFMAYLRPAMASLPPERLRVLTRATVLQVLVEPSEETGREGGLEAVGVRFLHDGVCGEAYAKREVVLAAGAYNTPKLLLLSGIGDPGHLEEIGIECVLSLPGVGKRLVDHINPGSLMFTGPPRKDYDANIVATYTRTGIVPDLTPDVELGFIMGPPVEEPAHWDKVPSLYVFYALWLLHDGVGSVRLKNRDPLEDPVIVSGYLKTATDLKRLVRIFRMLIEWSQTFARSSGLKLEQQRSGGNAIFVTEDSSDEEILKAARMVLSTHWHAAQSCRMGNPEHDPDAVVDPEFKVVGMEKLRVVDASSQPVLTNGHPMAALVMMAERAVDFMLGKAKER
Sbjct:    1 MVWTWGDRQDWELIDLEGWSFEDVYPYFLKSENYTGASSAYRHAVARGHAGPITLTSFPANEATLTAVSTAAETFNVPPEVDNNGGVHESVAVVQRDFQGPTIDTGVRMGAFMAYLRPAMASLPPERLRVLTRATVLQVLVEPSEETGREGGLEAVGVRFLHDGVCGEAYAKREVVLAAGAYNTPKLLLLSGIGDPGHLEEIGIECVLSLPGVGKRLVDHINPGSLMFTGPPRKDYDANIVATYTRTGIVPDLTPDVELGFIMGPPVEEPAHWDKVPSLYVFYALWLLHDGVGSVRLKNRDPLEDPVIVSGYLKTATDLKRLVRIFRMLIEWSQTFARSSGLKLEQQRSGGNAIFVTEDSSDEEILKAARMVLSTHWHAAQSCRMGNPEHDPDAVVDPEFKVVGMEKLRVVDASSQPVLTNGHPMAALVMMAERAVDFMLGKAKER 446          
BLAST of EWM24003.1 vs. NCBI_GenBank
Match: gi|558564522|ref|WP_023494719.1| (L-sorbose 1-dehydrogenase [Methyloglobulus morosus] >gi|557869214|gb|ESS72263.1| L-sorbose 1-dehydrogenase [Methyloglobulus morosus KoM1])

HSP 1 Score: 199.904 bits (507), Expect = 1.082e-54
Identity = 158/469 (33.69%), Postives = 220/469 (46.91%), Query Frame = 0
Query:    1 MVWTWGDRQD---WELIDLEGWSFEDVYPYFLKSENYTGASSAYRHAVARGHAGPITLTSFPANEATLTAVSTAAETFNVPPEVDNNGGVHESVAVVQRDFQGPTIDTGVRMGAFMAYLRPAMASLPPERLRVLTRATVLQVLVEPSEETGREGGLEAVGVRFLHDGVCGEAYAKREVVLAAGAYNTPKLLLLSGIGDPGHLEEIGIECVLSLPGVGKRLVDHINP-------GSLMFTGPPRK-------DYDAN----IVATYTRTGIV----PDLT-PDVELGFIMGPPVEEPAHWDKVPSLYVFYALWLLHDGVGSVRLKNRDPLEDPVIVSGYLKTATDLKRLVRIFR--MLIEWSQTFARSSGLKLEQQRSGGNAIFVTEDSSDEEILKAARMVLSTHWHAAQSCRMGNPEHDPDAVVDPEFKVVGMEKLRVVDASSQPVLTNGHPMAALVMMAERAVDFMLG 441
            M++  G+R D   W  +   GWS+EDV PYF+KSE   G +  Y      G +GP+ ++S P           AA+   +    D NG   +    +QR     TI  G R  A +AYL PA   L P  L V+  A   Q+L +             +GV++LH G  G+AYA  E++L+AGA+ +P+LL+LSG+G    LE++GI+  L LP VGK L DHI+          L F+  P +       DY A     + + +  TG      PD+T PD++L        E P             A        G V L + DPL+ P I  GY     DL+ LV   R  + I + Q F    G++L     G N    T D  D+ +    R   ST WH   +CRMG    D  AVVDP  +V G+  LRVVDAS  P + +G+  A  +M+AE+A D + G
Sbjct:   94 MIYIRGNRADYDHWASLGNTGWSYEDVLPYFIKSETNQGFNDRYH-----GQSGPLVVSSHPQLSPVTQRYLAAAQEVGIAYNPDFNGEQQDGCGQLQR-----TIAKGARCSAAIAYLHPA--RLRPN-LTVIGNAQATQLLFD---------NHRVIGVQYLHLGNVGQAYAACEIILSAGAFRSPQLLMLSGLGPASELEKLGIKVRLDLPEVGKNLQDHIHARVRCELTQPLTFSPLPNEDKIAAANDYQATKTGPLASNFLETGCFVKSHPDVTYPDLQLFLFGNLTPEYPEAGQATRHGIALTAYVNRPASRGEVTLSSSDPLDRPRINPGYFSDPDDLRCLVAGVRWNLKILYGQAFDDIRGIELS---PGIN----TRD--DDGLADFVRRTASTTWHPTTTCRMG---CDATAVVDPALRVNGVSGLRVVDASVMPTIVSGNTNAPTIMIAEKAADLIRG 528          
BLAST of EWM24003.1 vs. NCBI_GenBank
Match: gi|740465133|ref|WP_038296524.1| (choline dehydrogenase [[Scytonema hofmanni] UTEX B 1581])

HSP 1 Score: 199.134 bits (505), Expect = 1.359e-54
Identity = 149/453 (32.89%), Postives = 223/453 (49.23%), Query Frame = 0
Query:    1 MVWTWGDRQD---WELIDLEGWSFEDVYPYFLKSENYTGASSAYRHAVARGHAGPITLTSFPANEATLTAVSTAAETFNVPPEVDNNGGVHESVAVVQRDFQGPTIDTGVRMGAFMAYLRPAMASLPPERLRVLTRATVLQVLVEPSEETGREGGLEAVGVRFLHDGVCGEAYAKREVVLAAGAYNTPKLLLLSGIGDPGHLEEIGIECVLSLPGVGKRLVDHI-NPGSLMFTGPPRKDYDANI--VATYTRTGIVPDLTPDVELGFIMGPPVEEPAHWDKVPSLYVFYALWLLHDGVGSVRLKNRDPLEDPVIVSGYLKTATDLKRLV---RIFRMLIEWSQTFARSSGLKLEQQRSGGNAIFVTEDSSDEEILKAARMVLSTHWHAAQSCRMGNPEHDPDAVVDPEFKVVGMEKLRVVDASSQPVLTNGHPMAALVMMAERAVDFMLGKAK 444
            M++  G+R+D   W+ +   GWS++DV PYF KSEN    +S +      G  G +++T   A   T      AA         D NG   E   + Q      TI  G R     A+L P +       L   T A V ++L E         G   VGV ++H+G   + +  +EV+L+AGA+++PKLL+LSGIG P HL+ +GI  V+ LPGVG+ L DH+ +P +   T   +    +NI     +  T    D  PD++L F  GP +  P  + +  S +         +  GSV L++  P + PVI   YL++ +D+++LV   +I R L   S  F    G   E+   G +       +SDE +    R V  T +H   +C+MG    DP AVVDPE +V G++ LRVVDAS  P +T G+  A  +M+ E+A D +   A+
Sbjct:   92 MIYIRGNRRDFDQWQELGNPGWSYQDVLPYFKKSENQQRGASQFH-----GVGGALSVTDPIAPAVTSQRFVEAAVAMGYSNNPDFNGEQQEGAGLYQL-----TIKDGKRHSTAAAFLLPILNR---PNLTTTTEALVTRLLFE---------GTRTVGVEYMHEGKTHQVFVNQEVILSAGAFDSPKLLMLSGIGSPEHLQALGIPVVVDLPGVGQNLQDHLASPVAHQATQDLQPAVTSNIAEAGLFLHTESNLDAAPDIQLFF--GPVLWAPPAYARPGSGFASTPCLNHPESRGSVSLRSASPNDSPVIRLNYLQSESDVQKLVAGIKIIRQLFN-SNAFDEFRG---EEVAPGADV------TSDEALQAYVREVCDTVYHPVGTCKMGT---DPMAVVDPELRVYGVDGLRVVDASIMPNITTGNTNAPTIMIGEKAADLIKAVAR 507          
BLAST of EWM24003.1 vs. NCBI_GenBank
Match: gi|751573797|ref|WP_041042655.1| (choline dehydrogenase [Tolypothrix campylonemoides] >gi|750913058|gb|KIJ72978.1| choline dehydrogenase [Tolypothrix campylonemoides VB511288])

HSP 1 Score: 196.438 bits (498), Expect = 1.558e-53
Identity = 144/450 (32.00%), Postives = 215/450 (47.78%), Query Frame = 0
Query:    1 MVWTWGDRQD---WELIDLEGWSFEDVYPYFLKSENYTGASSAYRHAVARGHAGPITLTSFPANEATLTAVSTAAETFNVPPEVDNNGGVHESVAVVQRDFQGPTIDTGVRMGAFMAYLRPAMASLPPERLRVLTRATVLQVLVEPSEETGREGGLEAVGVRFLHDGVCGEAYAKREVVLAAGAYNTPKLLLLSGIGDPGHLEEIGIECVLSLPGVGKRLVDHINPGSLMFTGPPRKDYDANIVATYT--RTGIV------PDLTPDVELGFIMGPPVEEPAHWDKVPSLYVFYALWLLHDGVGSVRLKNRDPLEDPVIVSGYLKTATDLKRLVRIFRMLIEWSQTFARSSGLKLEQQRSGGNAIFVTEDSSDEEILKAARMVLSTHWHAAQSCRMGNPEHDPDAVVDPEFKVVGMEKLRVVDASSQPVLTNGHPMAALVMMAERAVDFM 439
            M +  G+R D   W+ +   GWS++DV PYF KSEN    +S +      G  G +++T   +          AA         D NG   E   + Q      T+  G R  A  A+L P +       L V T A V ++L E         G  AVGV +LH+G+  +    REV+L+AG +++PKLL+LSGIGD   LE +GI  V++LPGVG+ L DH     L    P +   D ++ +T +    G+        ++ PD++  F  GP V  P  +    S +           VGSV L++ DP E P+    YL++ TD++++V   +++ +   T           +  G       + +SDE +    R    T WH   +C+MG    DP AVVDPE +V G+E LRVVDAS  P +T G+  A  +M+ E+  DF+
Sbjct:   92 MFYVRGNRHDYDHWQELGNPGWSYQDVLPYFKKSENQQRGASDFH-----GVNGELSVTDPISPSVVSQRFIDAAMALGYDYNPDFNGIQQEGAGLYQL-----TVKDGKRHSAAAAFLVPILQR---PNLTVTTGALVTRLLFE---------GTRAVGVEYLHEGMLHQVRVNREVILSAGTFDSPKLLMLSGIGDAAQLEALGISVVVNLPGVGQNLQDH-----LFIPVPYQATQDLHLASTSSVGEAGLFLHSEGNSEVAPDLQ--FFFGPAVLAPPGYAHSGSGFTGVISLNRLQNVGSVSLRSSDPKEPPMFRMNYLQSETDVQKVVAAIKLMRQLFHT-------SFFDEFRGAEIAPGADVTSDEALEAYIRNNGGTMWHPVGTCKMGT---DPMAVVDPELRVHGVEGLRVVDASIMPTITTGNTNAPTIMIGEKGADFI 502          
BLAST of EWM24003.1 vs. NCBI_GenBank
Match: gi|516324706|ref|WP_017715365.1| (hypothetical protein [Oscillatoria sp. PCC 10802])

HSP 1 Score: 196.052 bits (497), Expect = 1.896e-53
Identity = 156/453 (34.44%), Postives = 225/453 (49.67%), Query Frame = 0
Query:    1 MVWTWGDRQD---WELIDLEGWSFEDVYPYFLKSENYTGASSAYRHAVARGHAGPITLTSFPANEATLTAVSTAAET-FNVPPEVDNNGGVHESVAVVQRDFQGPTIDTGVRMGAFMAYLRPAMASLPPERLRVLTRATVLQVLVEPSEETGREGGLEAVGVRFLHDGVCGEAYAKREVVLAAGAYNTPKLLLLSGIGDPGHLEEIGIECVLSLPGVGKRLVDHINPGSLMFTGPPRKDY-------DANIVATYTRTGIVPDLTPDVELGFIMG-PPVEEPAHWDKVPSLYVFYALWLLHDGVGSVRLKNRDPLEDPVIVSGYLKTATDLKRLVRIFRMLIEWSQTFARSSGLKLE-QQRSGGNAIFVTEDSSDEEILKAARMVLSTHWHAAQSCRMGNPEHDPDAVVDPEFKVVGMEKLRVVDASSQPVLTNGHPMAALVMMAERAVDFML 440
            M++  GDR D   W  +  EGWS+EDV PYF KSE+Y G +  Y H    G  G       PA    L A   AAE  +   P+VD N   H +  ++Q +F       G R  A   +L P    L    L V T+A V +VL E         G  AVGV ++ DG   +  A+REV+L+AGA+ +PK+L+LSGIG   HL+  GI  V+ LPGVG+ L DH+    LM     + +        +  + A  +R+G+    +PD+++ F  G P   + A +       +F  + +     G V+L++ +P + PV+   YL   TD+K  +R   +  E + T A S     E    +GGN          EE +   R   +T WH A SC+MG    D  AVVDP+ +V G+E LRV DAS  P +++G+  A  VM+ E+A D +L
Sbjct:   98 MMYVRGDRLDYDHWNFLGNEGWSYEDVLPYFKKSEDYEGGADEY-HGAGGGMKGMKCPDLTPAAYGFLNA---AAELGYKSGPDVDLNAADHSAAGIMQYNF----TQDGKRCSAADGFLTPV---LDRPNLTVKTKAEVTRVLFE---------GTRAVGVEYIQDGATHQVRAEREVILSAGAFLSPKILMLSGIGPADHLQSHGISVVVDLPGVGQNLQDHMR---LMVAYKSKTELPLPTTVAEVGLFAR-SRSGMQA-ASPDLQINFSAGIPGFVDVAEFPFEGPHSIFVPILVQAQSRGYVKLRSSNPQDKPVVNPNYLGVETDVKAYIRGVEICREMANTQAFSEFNDGEICPGAGGNV---------EEYI---RSHATTIWHPAGSCKMG---RDAMAVVDPQLRVYGVEGLRVADASIMPTVSSGNTNAPSVMIGEKAADMIL 510          
BLAST of EWM24003.1 vs. NCBI_GenBank
Match: gi|1121310475|ref|WP_073621671.1| (choline dehydrogenase [Calothrix sp. HK-06] >gi|1115282067|gb|OKH45245.1| choline dehydrogenase [Calothrix sp. HK-06])

HSP 1 Score: 196.052 bits (497), Expect = 2.255e-53
Identity = 145/448 (32.37%), Postives = 213/448 (47.54%), Query Frame = 0
Query:    1 MVWTWGDRQD---WELIDLEGWSFEDVYPYFLKSENYTGASSAYRHAVARGHAGPITLTSFPANEATLTAVSTAAETFNVPPEVDNNGGVHESVAVVQRDFQGPTIDTGVRMGAFMAYLRPAMASLPPERLRVLTRATVLQVLVEPSEETGREGGLEAVGVRFLHDGVCGEAYAKREVVLAAGAYNTPKLLLLSGIGDPGHLEEIGIECVLSLPGVGKRLVDH-INPGSLMFTGPPRKDYDANI--VATYTRTGIVPDLTPDVELGFIMGPPVEEPAHWDKVPSLYVFYALWLLHDGVGSVRLKNRDPLEDPVIVSGYLKTATDLKRLV---RIFRMLIEWSQTFARSSGLKLEQQRSGGNAIFVTEDSSDEEILKAARMVLSTHWHAAQSCRMGNPEHDPDAVVDPEFKVVGMEKLRVVDASSQPVLTNGHPMAALVMMAERAVDFM 439
            M++  G+ QD   WE +   GWS++ V PYF KSE+    +S +      G  G +++T   +          AA         D NG   E   + Q      TI  G R     A+L P +       L + TRA V ++L E         G   +GV +LH+G   +     EV+L+AGA+++PKLL+LSGIG+P H++ +GI  V+ LPGVG+ L DH I P     T        ++I     +  T    D  PD++  F+ GP V  P  +D   S +           +GSV L++ DP   P+I   YL++  D+++LV   ++ R L   S  F    G +L             +  SDE +    R   ST +H   +C+MG    DP AVVDPE +V G+E LRVVDAS  P +T G+  A  +M+ E+A D +
Sbjct:   92 MIYMRGNYQDYDHWESLGNPGWSYQHVLPYFKKSEHQQRGASEFH-----GMDGELSVTDLISPAVVSQRFVEAAVALGYAHNPDVNGMQQEGAGLYQL-----TIKEGKRHSTATAFLVPILQR---PNLTITTRALVTRLLFE---------GTRTIGVEYLHEGTLHQVRVNYEVILSAGAFDSPKLLMLSGIGNPEHVQGLGIPVVVDLPGVGQNLQDHPIVPVVHKATQDLHTASTSSIAEAGLFLHTQDNLDAAPDLQ--FLFGPIVFAPPGYDHSGSGFTSLVCLTHPQNIGSVSLRSPDPKNAPIIRMNYLQSEADVQKLVVGIKLMRQLFHTS-VFNEFRGEELAPG---------ADKQSDEALEAYVREACSTVYHPVGTCKMGT---DPMAVVDPELRVYGVEGLRVVDASIMPTITTGNTNAPTIMIGEKAADLI 502          
BLAST of EWM24003.1 vs. NCBI_GenBank
Match: gi|1121321755|ref|WP_073631894.1| (choline dehydrogenase [Scytonema sp. HK-05] >gi|1115295176|gb|OKH58181.1| choline dehydrogenase [Scytonema sp. HK-05] >gi|1210131405|dbj|BAY50518.1| glucose-methanol-choline oxidoreductase (plasmid) [Scytonema sp. HK-05])

HSP 1 Score: 194.512 bits (493), Expect = 9.912e-53
Identity = 148/455 (32.53%), Postives = 223/455 (49.01%), Query Frame = 0
Query:    1 MVWTWGDRQD---WELIDLEGWSFEDVYPYFLKSENYTGASSAYRHAVARGHAGPITLTSFPANEATLTAVSTAAETFNVPPEVDNNGGVHESVAVVQRDFQGP---TIDTGVRMGAFMAYLRPAMASLPPERLRVLTRATVLQVLVEPSEETGREGGLEAVGVRFLHDGVCGEAYAKREVVLAAGAYNTPKLLLLSGIGDPGHLEEIGIECVLSLPGVGKRLVDHINPGSLMFTGPPRKDYDANIVATYTRTGIV------PDLTPDVELGFIMGPPVEEPAHWDKVPSLYVFYALWLLHDGVGSVRLKNRDPLEDPVIVSGYLKTATDLKRLVRIFRMLIEWSQTFARSSGLKLEQQRSGGNAIFVTEDSSDEEILKA-ARMVLSTHWHAAQSCRMGNPEHDPDAVVDPEFKVVGMEKLRVVDASSQPVLTNGHPMAALVMMAERAVDFMLGK 442
            M++  G+  D   W+ +   GWS++DV PYF KSE+    +S Y      G  G +++T+  +          A  T       D N         +Q++  GP   T+  G R  A  A+L P         L   T A V ++L E         G  AVGV +LH+G   +    +EV+L+AGA+++PKLLLLSGIGD  HL+ +GI  V  LPGVG+ L DHI   S+++     +D    I +     G+        D+ PD++  F  GP    P  +    S +           +GSV L++ +P + P+I   YL++ +D+++LV   +++ +  QT A       ++ R  G  I    D   +E L+A  R   ST WH   +C+MG    DP AVVDPE +V G+E LRVVDAS  P +T G+  A  +M+ E+A D + G+
Sbjct:   92 MMYVRGNSHDYDHWQELGNPGWSYQDVLPYFKKSEHQQRGASEYH-----GVDGELSVTNVMSPAVVSQRFVDACVTMGYEYNPDFNA--------IQQEGAGPYQLTVKDGKRHSAAAAFLLPIFQR---PNLTTTTGALVTRLLFE---------GTRAVGVEYLHEGTLHQVRVNQEVILSAGAFDSPKLLLLSGIGDAEHLQAMGISVVADLPGVGQNLQDHILV-SIVYEA--TQDVHPAITSNGVEAGLFLHSEGNLDVAPDLQ--FFCGPIQFLPPGYAPCDSGFTGAVSLTRFQNIGSVSLRSPNPKDTPMIRMNYLQSQSDVQKLVAGIKLMRQLFQTSA------FDEFR--GKEIAPGVDVQSDEALEAYIRDACSTEWHPVGTCKMGI---DPMAVVDPELRVHGVEGLRVVDASIMPTITTGNTNAPTIMIGEKAADLIKGR 505          
BLAST of EWM24003.1 vs. NCBI_GenBank
Match: gi|1210104791|dbj|BAY23921.1| (glucose-methanol-choline oxidoreductase [Calothrix sp. NIES-2100])

HSP 1 Score: 194.512 bits (493), Expect = 1.185e-52
Identity = 146/448 (32.59%), Postives = 220/448 (49.11%), Query Frame = 0
Query:    1 MVWTWGDRQD---WELIDLEGWSFEDVYPYFLKSENYTGASSAYRHAVARGHAGPITLTSFPANEATLTAVSTAAETFNVPPEVDNNGGVHESVAVVQRDFQGPTIDTGVRMGAFMAYLRPAMASLPPERLRVLTRATVLQVLVEPSEETGREGGLEAVGVRFLHDGVCGEAYAKREVVLAAGAYNTPKLLLLSGIGDPGHLEEIGIECVLSLPGVGKRLVDH--INPGSLMFTGPPRKDYDANIV--ATYTRTGIVPDLTPDVELGFIMGPPVEEPAHWDKVPSLYVFYALWLLHDGVGSVRLKNRDPLEDPVIVSGYLKTATDLKRLVRIFRMLIEWSQTFARSSGLK--LEQQRSGGNAIFVTEDSSDEEILKAARMVLSTHWHAAQSCRMGNPEHDPDAVVDPEFKVVGMEKLRVVDASSQPVLTNGHPMAALVMMAERAVDFM 439
            M++  G+R D   W+ +   GWS+E+V PYF KSEN    +S +      G  G +++T+  A          AAE        D NG   E   + Q      TI  G R  A  A+L P    L    L V T A V ++L +         G   VGV +LH G   + Y  +EV+L+AG +++PKLL+LSGIG+  HL  + I  V  LPGVG+ L DH  +  G       P     +NIV    +  +G   ++ PD++  F+  P +  P    +V S     A  +     G+V L++++PL+  VI   YL+  TDL+ LV   ++    ++  A S+     LE++ + G  I      SDE +    R   +T+WH   +C+MGN   D  AVVD + +V G+E LRVVDAS  P + +G+  A+ +M+ E+A D +
Sbjct:  112 MIYIRGNRHDFDCWQELGNPGWSYEEVLPYFKKSENQQRGASEFH-----GVDGALSVTNPLAPAVISEQFIAAAEQLGYARNPDFNGAQQEGAGLYQL-----TIKDGKRHSAAAAFLVPI---LDRPNLTVQTGALVTRLLFK---------GTRTVGVEYLHQGTLQQVYVNQEVILSAGVFDSPKLLMLSGIGNAEHLRSLNISVVADLPGVGENLHDHPLVAVGYKSTQARPAIAPTSNIVEAGLFLHSGKSNEVAPDLQ--FLFSPALLSPTLTHEV-SGATLVACLIKPQSHGTVTLRSKNPLDPAVIQMNYLQCETDLQVLVEGIKI----ARQLAHSAAFDQVLEEEVAPGKDII-----SDEALAAYIRQTANTYWHPVGTCKMGN---DLMAVVDAQLRVHGIEGLRVVDASVMPTIPSGNTNASTIMIGEKAADLI 522          
BLAST of EWM24003.1 vs. NCBI_GenBank
Match: gi|1209850028|dbj|GAX45924.1| (glucose-methanol-choline oxidoreductase [Tolypothrix sp. NIES-4075])

HSP 1 Score: 193.741 bits (491), Expect = 2.090e-52
Identity = 150/453 (33.11%), Postives = 223/453 (49.23%), Query Frame = 0
Query:    1 MVWTWGDRQD---WELIDLEGWSFEDVYPYFLKSENYTGASSAYRHAVARGHAGPITLTSFPANEATLTAVSTAAETFNVPPEVDNNGGVHESVAVVQRDFQGPTIDTGVRMGAFMAYLRPAMASLPPERLRVLTRATVLQVLVEPSEETGREGGLEAVGVRFLHDGVCGEAYAKREVVLAAGAYNTPKLLLLSGIGDPGHLEEIGIECVLSLPGVGKRLVDHI-NPGSLMFTGPPRKDYDANI--VATYTRTGIVPDLTPDVELGFIMG-----PPVEEPAHWDKVPSLYVFYALWLLHDGVGSVRLKNRDPLEDPVIVSGYLKTATDLKRLV---RIFRMLIEWSQTFARSSGLKLEQQRSGGNAIFVTEDSSDEEILKAARMVLSTHWHAAQSCRMGNPEHDPDAVVDPEFKVVGMEKLRVVDASSQPVLTNGHPMAALVMMAERAVDFM 439
            M++  G+  D   W+ +   GWS++DV PYF KSE     +SAY      G  G +++T   A  A       A+         D NG   E   + Q+     TI  G R  A  A+L P         L + T A V ++L E         G   VGV +LH+G+  +   +RE +L+AGA+++PKLL+LSGIGD  HL+ +GI  V++LPGVG+ L DHI +P     T        ++I     +  +    ++ PD++  F+ G     PP   PA +    ++    AL  L + +GSV L+  DP + P++   YL+  TD+K+LV   ++ R L   S  F    G ++             E  SDE ++   R   +T WH   +C+MG    DP AVVDPE +V G+E LRVVDAS  P +T G+  A  +M+ E+A D +
Sbjct:   92 MMYVRGNHHDYDHWQELGNPGWSYQDVLPYFKKSEQQQRGASAYH-----GVDGELSVTDLIAPTAISQRFVEASVAMGFDYNPDFNGTQQEGAGLYQQ-----TIKEGKRHSAAAAFLVPIAQR---RNLTITTGALVTRLLFE---------GTCTVGVEYLHEGMLHQVRVEREAILSAGAFDSPKLLMLSGIGDAAHLQTLGIPVVVNLPGVGQNLQDHIFSPVVYQATQDLHFASTSSIGEAGLFLHSKWNSEVAPDLQ--FLFGSIQLLPPGYAPAAFGFTGAV----ALTRLQN-IGSVGLRTPDPKDTPMLRMNYLQNETDVKKLVEGIKLMRQLFH-SNFFDEFRGAEIAPG---------AEVKSDEALVAYIRNNCNTVWHPVGTCKMG---IDPMAVVDPELRVHGVEGLRVVDASIMPTITTGNTNAPTIMIGEKAADLI 502          
The following BLAST results are available for this feature:
BLAST of EWM24003.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553183950|ref|XP_005854000.1|0.000e+0100.00choline dehydrogenase [Nannochloropsis gaditana CC... [more]
gi|585105290|gb|EWM24003.1|0.000e+0100.00glucose-methanol-choline oxidoreductase [Nannochlo... [more]
gi|558564522|ref|WP_023494719.1|1.082e-5433.69L-sorbose 1-dehydrogenase [Methyloglobulus morosus... [more]
gi|740465133|ref|WP_038296524.1|1.359e-5432.89choline dehydrogenase [[Scytonema hofmanni] UTEX B... [more]
gi|751573797|ref|WP_041042655.1|1.558e-5332.00choline dehydrogenase [Tolypothrix campylonemoides... [more]
gi|516324706|ref|WP_017715365.1|1.896e-5334.44hypothetical protein [Oscillatoria sp. PCC 10802][more]
gi|1121310475|ref|WP_073621671.1|2.255e-5332.37choline dehydrogenase [Calothrix sp. HK-06] >gi|11... [more]
gi|1121321755|ref|WP_073631894.1|9.912e-5332.53choline dehydrogenase [Scytonema sp. HK-05] >gi|11... [more]
gi|1210104791|dbj|BAY23921.1|1.185e-5232.59glucose-methanol-choline oxidoreductase [Calothrix... [more]
gi|1209850028|dbj|GAX45924.1|2.090e-5233.11glucose-methanol-choline oxidoreductase [Tolypothr... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6654rna6654Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications