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Properties
| Property Name | Value |
|---|
| Product | tetratricopeptide repeat family protein |
| Orig transcript id | gnl|cribi|Naga_100974g2.7600.mrna |
| Orig protein id | gnl|cribi|Naga_100974g2.7600 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:107716..110134 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna665 ID=rna665|Name=rna665|organism=Nannochloropsis gaditana|type=mRNA|length=257bp
CCCAGCTCCAAGGCGACTCCCTCTGCTCCTTCTGCAGCCGCATGAAGCGC
GGACTGCTCTATACATGCTGCGTGGAAAACGGGTACAACAAGTTGCTCTT
GGCGCAGCACCTTGATGACCTGGTGGAATCCCTCTTTATGTCGCTCATGC
ACAACGGCCAGGTGGGGGGGAGGGCGGGAGGGAGGGCGGGAGGGCGGGAG
AAGGGAGGGAGGAATTCCAAAGGAAGAAGAGGGAGGAGCACAAGCATGGC
ACTGTGA back to topprotein sequence of rna665 >rna665-protein ID=rna665-protein|Name=rna665|organism=Nannochloropsis gaditana|type=polypeptide|length=569bp
MCIMFRPKCCTLSLLLLSHAVQTGAFLRPLPLFRLAPLPSTSPTRPLFLP
RSPLSFTASSAPQEGQAPSVQSSPPSPLYDQQEGGWSYFHSVPRALPGGR
TLREDRVSSESGEPFAGEEEGERGRQRRRLVLYGAQGEREGDLVFVESRG
KSLHLETLQVKEGDATEGGGEAAAATLSPAHSLILGAMERFLNRGGRIGQ
VTVGDAGQEGRGLEPLQASATALGFRPIPPEGAPAKDKGQAGRPVLQGGL
TDVLPELQALSRDTSASGSALLLNVLGRLEHDAQNFKAASDLYTQALTLQ
PNSSTIFQNLGAAFASQGEHQLAFASFQRAIDLNANDRYTYFKLGMMYEQ
LATGKYKEAAEHALSCYAFYVDGREGGEDTDALTIYGNLLVKRLCPAEAV
EVYKRALALEAGLWNVWFNMANAYLKIGEKEDAIIALQQTLSLNPNVSAA
RHLLLSITGAQGGGEGGAAAPVEADPAYVVELFDYYAPTYDQHMKEGLLY
TAPRILRQEVRKVLNHTLFTEGAMGPVTPEGSGEALLRALNKSMRILDLG
CGTVGWRWGRGGMKGGRGR back to topmRNA from alignment at CM002456.1:107716..110134- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna665 ID=rna665|Name=rna665|organism=Nannochloropsis gaditana|type=mRNA|length=2419bp|location=Sequence derived from alignment at CM002456.1:107716..110134- (Nannochloropsis gaditana)
AAAACGTCACTTCCATAGTTTTCGGGGCTCACTACCACAGGAAGAGGGGG
CACCGTGCATGGCGTCGTAAATCGTGCTGAACAGTGAAGTATCTTTGAGA
TCGACATCGAAGGTGGAGGCGGGACGCGGAGGTTAGTAAGCCTCAGGACA
GCCGCAGACTTCCCTTTTGTGAATTACCCGTCCGATAAACACTATGTGCA
TCATGTTTCGACCAAAGTGCTGCACTTTAAGCCTCCTCCTCTTGAGCCAC
GCCGTGCAAACGGGCGCTTTCCTCCGCCCCCTCCCCCTCTTCCGGCTAGC
GCCCCTTCCATCGACCTCTCCAACCCGTCCTCTGTTCCTCCCTCGCAGCC
CTTTGTCTTTCACTGCCTCTTCAGCACCTCAAGAAGGGCAAGCGCCATCA
GTCCAGTCATCGCCACCGTCCCCTTTGTATGATCAGCAAGAAGGAGGATG
GAGCTATTTCCACAGCGTCCCACGTGCTTTGCCAGGGGGACGCACGTTGA
GGGAGGACAGGGTGAGCTCAGAATCTGGCGAGCCTTTCGCAGGAGAGGAA
GAAGGAGAAAGGGGCCGCCAACGTCGCCGGCTGGTCTTGTACGGCGCACA
GGGGGAGAGGGAGGGTGACCTGGTGTTTGTGGAGTCTCGGGGCAAGAGCC
TGCACTTGGAAACCCTGCAAGTCAAGGAAGGGGACGCGACGGAGGGCGGA
GGCGAAGCGGCGGCTGCAACACTTTCTCCCGCCCATAGCCTGATATTGGG
TGCCATGGAGCGGTTTTTGAACCGGGGAGGGCGCATAGGACAGGTGACGG
TGGGCGACGCCGGGCAGGAGGGGAGGGGCCTCGAGCCTCTTCAGGCCTCA
GCCACGGCCCTAGGCTTCCGACCCATCCCTCCCGAGGGGGCACCGGCCAA
GGACAAGGGGCAGGCGGGCCGCCCGGTCCTACAAGGCGGCCTGACTGACG
TCCTCCCCGAGCTCCAGGCTTTATCCAGGGATACCTCCGCGTCGGGCTCC
GCTTTGCTCCTGAACGTGCTGGGGAGGTTGGAACACGACGCCCAGAACTT
CAAGGCCGCCAGTGACTTGTACACGCAGGCCTTGACCTTGCAGCCGAACA
GTTCCACCATCTTCCAGAATCTGGGGGCGGCTTTTGCTTCCCAGGGGGAG
CATCAGCTGGCCTTTGCCTCCTTCCAACGGGCGATCGATTTGAATGCGAA
CGACCGTTACACGTATTTCAAACTCGGGATGATGTACGAACAGCTGGCGA
CGGGCAAGTACAAGGAAGCCGCCGAGCACGCCTTGAGTTGCTACGCGTTT
TATGTGGACGGGCGGGAGGGCGGGGAGGACACAGACGCCCTGACCATCTA
CGGGAACTTGCTGGTGAAGCGGTTGTGCCCCGCGGAGGCCGTCGAGGTGT
ACAAACGGGCCTTGGCCCTGGAAGCAGGGCTTTGGAACGTCTGGTTCAAC
ATGGCAAATGCCTATTTGAAGATTGGGGAGAAGGAAGATGTAAGGGGGAG
GGAGGGGATCGCCGTGGGGGGGTACCTCTCTTCCTTCTCTGCGGCGCTGA
ACATCCTCTCCCCCCCCACCTTCTCTCCACCTACCTTTTCCCCCTCCTCC
CTCCCAGGCCATCATTGCGCTCCAGCAGACGCTGTCGCTCAACCCGAACG
TCTCCGCCGCCCGTCACCTCCTCCTCTCCATCACAGGGGCCCAAGGAGGG
GGAGAGGGAGGGGCGGCCGCCCCTGTAGAAGCTGATCCTGCCTATGTGGT
GGAGCTATTTGACTACTATGCGCCTACCTACGACCAGCACATGAAAGAAG
GGTGTGAACTCCCGCTCCCTCCCTCCCTCCCTCCCGCCCTCCCTCTCTCC
CTTCCTTCCTCTTCTGCTCCTCCCTGGGCCCCAGCCTCGGTCCTCCCTCT
TCTCACCTCCCTCCCTCCCTCCCTCCCTTCCTCCCCCCCTCAGCCTCCTC
TACACCGCCCCTCGGATCCTGCGTCAAGAAGTCCGGAAGGTCCTGAACCA
CACGCTCTTCACTGAGGGGGCCATGGGCCCCGTCACGCCCGAAGGAAGCG
GGGAGGCCCTGCTGCGGGCATTGAACAAGAGCATGCGCATCCTTGACTTA
GGCTGTGGGACGGTAGGCTGGCGGTGGGGGAGGGGTGGGATGAAAGGGGG
GCGTGGTCGTTAGGGTGGTGGGGGGGGATCTGGGAGAGACGTGGGAGGAG
GGGTGCTTGGTATGGTGGTGGGTGGGCGCACAGTGGATGTCCTTCCAGAA
GGTCTGGCGCTGTGGATCCCCTTCTAGAACATTTCTTGCTGTGGGTATCC
TTCTAGAACATCTGTCTTGTCTTGGAGAGGCACCAGGTGTCTGGCATGGG
TCTCACCTTCCCCCAGGCCCTCCTGTCCGCCCATTTTTCCTCCTTTAACC
CTCACTTCATCTCACCCCT back to topCoding sequence (CDS) from alignment at CM002456.1:107716..110134- >rna665 ID=rna665|Name=rna665|organism=Nannochloropsis gaditana|type=CDS|length=5130bp|location=Sequence derived from alignment at CM002456.1:107716..110134- (Nannochloropsis gaditana)
CCTCCTCTACACCGCCCCTCGGATCCTGCGTCAAGAAGTCCGGAAGGTCC
TGAACCACACGCTCTTCACTGAGGGGGCCATGGGCCCCGTCACGCCCGAA
GGAAGCGGGGAGGCCCTGCTGCGGGCATTGAACAAGAGCATGCGCATCCT
TGACTTAGGCTGTGGGACGGTAGGCTGGCGGTGGGGGAGGGGTGGGATGA
AAGGGGGGCGTGGTCGTTAGGCCATCATTGCGCTCCAGCAGACGCTGTCG
CTCAACCCGAACGTCTCCGCCGCCCGTCACCTCCTCCTCTCCATCACAGG
GGCCCAAGGAGGGGGAGAGGGAGGGGCGGCCGCCCCTGTAGAAGCTGATC
CTGCCTATGTGGTGGAGCTATTTGACTACTATGCGCCTACCTACGACCAG
CACATGAAAGAAGGATGTGCATCATGTTTCGACCAAAGTGCTGCACTTTA
AGCCTCCTCCTCTTGAGCCACGCCGTGCAAACGGGCGCTTTCCTCCGCCC
CCTCCCCCTCTTCCGGCTAGCGCCCCTTCCATCGACCTCTCCAACCCGTC
CTCTGTTCCTCCCTCGCAGCCCTTTGTCTTTCACTGCCTCTTCAGCACCT
CAAGAAGGGCAAGCGCCATCAGTCCAGTCATCGCCACCGTCCCCTTTGTA
TGATCAGCAAGAAGGAGGATGGAGCTATTTCCACAGCGTCCCACGTGCTT
TGCCAGGGGGACGCACGTTGAGGGAGGACAGGGTGAGCTCAGAATCTGGC
GAGCCTTTCGCAGGAGAGGAAGAAGGAGAAAGGGGCCGCCAACGTCGCCG
GCTGGTCTTGTACGGCGCACAGGGGGAGAGGGAGGGTGACCTGGTGTTTG
TGGAGTCTCGGGGCAAGAGCCTGCACTTGGAAACCCTGCAAGTCAAGGAA
GGGGACGCGACGGAGGGCGGAGGCGAAGCGGCGGCTGCAACACTTTCTCC
CGCCCATAGCCTGATATTGGGTGCCATGGAGCGGTTTTTGAACCGGGGAG
GGCGCATAGGACAGGTGACGGTGGGCGACGCCGGGCAGGAGGGGAGGGGC
CTCGAGCCTCTTCAGGCCTCAGCCACGGCCCTAGGCTTCCGACCCATCCC
TCCCGAGGGGGCACCGGCCAAGGACAAGGGGCAGGCGGGCCGCCCGGTCC
TACAAGGCGGCCTGACTGACGTCCTCCCCGAGCTCCAGGCTTTATCCAGG
GATACCTCCGCGTCGGGCTCCGCTTTGCTCCTGAACGTGCTGGGGAGGTT
GGAACACGACGCCCAGAACTTCAAGGCCGCCAGTGACTTGTACACGCAGG
CCTTGACCTTGCAGCCGAACAGTTCCACCATCTTCCAGAATCTGGGGGCG
GCTTTTGCTTCCCAGGGGGAGCATCAGCTGGCCTTTGCCTCCTTCCAACG
GGCGATCGATTTGAATGCGAACGACCGTTACACGTATTTCAAACTCGGGA
TGATGTACGAACAGCTGGCGACGGGCAAGTACAAGGAAGCCGCCGAGCAC
GCCTTGAGTTGCTACGCGTTTTATGTGGACGGGCGGGAGGGCGGGGAGGA
CACAGACGCCCTGACCATCTACGGGAACTTGCTGGTGAAGCGGTTGTGCC
CCGCGGAGGCCGTCGAGGTGTACAAACGGGCCTTGGCCCTGGAAGCAGGG
CTTTGGAACGTCTGGTTCAACATGGCAAATGCCTATTTGAAGATTGGGGA
GAAGGAAGATCCTCCTCTACACCGCCCCTCGGATCCTGCGTCAAGAAGTC
CGGAAGGTCCTGAACCACACGCTCTTCACTGAGGGGGCCATGGGCCCCGT
CACGCCCGAAGGAAGCGGGGAGGCCCTGCTGCGGGCATTGAACAAGAGCA
TGCGCATCCTTGACTTAGGCTGTGGGACGGTAGGCTGGCGGTGGGGGAGG
GGTGGGATGAAAGGGGGGCGTGGTCGTTAGGCCATCATTGCGCTCCAGCA
GACGCTGTCGCTCAACCCGAACGTCTCCGCCGCCCGTCACCTCCTCCTCT
CCATCACAGGGGCCCAAGGAGGGGGAGAGGGAGGGGCGGCCGCCCCTGTA
GAAGCTGATCCTGCCTATGTGGTGGAGCTATTTGACTACTATGCGCCTAC
CTACGACCAGCACATGAAAGAAGGATGTGCATCATGTTTCGACCAAAGTG
CTGCACTTTAAGCCTCCTCCTCTTGAGCCACGCCGTGCAAACGGGCGCTT
TCCTCCGCCCCCTCCCCCTCTTCCGGCTAGCGCCCCTTCCATCGACCTCT
CCAACCCGTCCTCTGTTCCTCCCTCGCAGCCCTTTGTCTTTCACTGCCTC
TTCAGCACCTCAAGAAGGGCAAGCGCCATCAGTCCAGTCATCGCCACCGT
CCCCTTTGTATGATCAGCAAGAAGGAGGATGGAGCTATTTCCACAGCGTC
CCACGTGCTTTGCCAGGGGGACGCACGTTGAGGGAGGACAGGGTGAGCTC
AGAATCTGGCGAGCCTTTCGCAGGAGAGGAAGAAGGAGAAAGGGGCCGCC
AACGTCGCCGGCTGGTCTTGTACGGCGCACAGGGGGAGAGGGAGGGTGAC
CTGGTGTTTGTGGAGTCTCGGGGCAAGAGCCTGCACTTGGAAACCCTGCA
AGTCAAGGAAGGGGACGCGACGGAGGGCGGAGGCGAAGCGGCGGCTGCAA
CACTTTCTCCCGCCCATAGCCTGATATTGGGTGCCATGGAGCGGTTTTTG
AACCGGGGAGGGCGCATAGGACAGGTGACGGTGGGCGACGCCGGGCAGGA
GGGGAGGGGCCTCGAGCCTCTTCAGGCCTCAGCCACGGCCCTAGGCTTCC
GACCCATCCCTCCCGAGGGGGCACCGGCCAAGGACAAGGGGCAGGCGGGC
CGCCCGGTCCTACAAGGCGGCCTGACTGACGTCCTCCCCGAGCTCCAGGC
TTTATCCAGGGATACCTCCGCGTCGGGCTCCGCTTTGCTCCTGAACGTGC
TGGGGAGGTTGGAACACGACGCCCAGAACTTCAAGGCCGCCAGTGACTTG
TACACGCAGGCCTTGACCTTGCAGCCGAACAGTTCCACCATCTTCCAGAA
TCTGGGGGCGGCTTTTGCTTCCCAGGGGGAGCATCAGCTGGCCTTTGCCT
CCTTCCAACGGGCGATCGATTTGAATGCGAACGACCGTTACACGTATTTC
AAACTCGGGATGATGTACGAACAGCTGGCGACGGGCAAGTACAAGGAAGC
CGCCGAGCACGCCTTGAGTTGCTACGCGTTTTATGTGGACGGGCGGGAGG
GCGGGGAGGACACAGACGCCCTGACCATCTACGGGAACTTGCTGGTGAAG
CGGTTGTGCCCCGCGGAGGCCGTCGAGGTGTACAAACGGGCCTTGGCCCT
GGAAGCAGGGCTTTGGAACGTCTGGTTCAACATGGCAAATGCCTATTTGA
AGATTGGGGAGAAGGAAGATCCTCCTCTACACCGCCCCTCGGATCCTGCG
TCAAGAAGTCCGGAAGGTCCTGAACCACACGCTCTTCACTGAGGGGGCCA
TGGGCCCCGTCACGCCCGAAGGAAGCGGGGAGGCCCTGCTGCGGGCATTG
AACAAGAGCATGCGCATCCTTGACTTAGGCTGTGGGACGGTAGGCTGGCG
GTGGGGGAGGGGTGGGATGAAAGGGGGGCGTGGTCGTTAGGCCATCATTG
CGCTCCAGCAGACGCTGTCGCTCAACCCGAACGTCTCCGCCGCCCGTCAC
CTCCTCCTCTCCATCACAGGGGCCCAAGGAGGGGGAGAGGGAGGGGCGGC
CGCCCCTGTAGAAGCTGATCCTGCCTATGTGGTGGAGCTATTTGACTACT
ATGCGCCTACCTACGACCAGCACATGAAAGAAGGATGTGCATCATGTTTC
GACCAAAGTGCTGCACTTTAAGCCTCCTCCTCTTGAGCCACGCCGTGCAA
ACGGGCGCTTTCCTCCGCCCCCTCCCCCTCTTCCGGCTAGCGCCCCTTCC
ATCGACCTCTCCAACCCGTCCTCTGTTCCTCCCTCGCAGCCCTTTGTCTT
TCACTGCCTCTTCAGCACCTCAAGAAGGGCAAGCGCCATCAGTCCAGTCA
TCGCCACCGTCCCCTTTGTATGATCAGCAAGAAGGAGGATGGAGCTATTT
CCACAGCGTCCCACGTGCTTTGCCAGGGGGACGCACGTTGAGGGAGGACA
GGGTGAGCTCAGAATCTGGCGAGCCTTTCGCAGGAGAGGAAGAAGGAGAA
AGGGGCCGCCAACGTCGCCGGCTGGTCTTGTACGGCGCACAGGGGGAGAG
GGAGGGTGACCTGGTGTTTGTGGAGTCTCGGGGCAAGAGCCTGCACTTGG
AAACCCTGCAAGTCAAGGAAGGGGACGCGACGGAGGGCGGAGGCGAAGCG
GCGGCTGCAACACTTTCTCCCGCCCATAGCCTGATATTGGGTGCCATGGA
GCGGTTTTTGAACCGGGGAGGGCGCATAGGACAGGTGACGGTGGGCGACG
CCGGGCAGGAGGGGAGGGGCCTCGAGCCTCTTCAGGCCTCAGCCACGGCC
CTAGGCTTCCGACCCATCCCTCCCGAGGGGGCACCGGCCAAGGACAAGGG
GCAGGCGGGCCGCCCGGTCCTACAAGGCGGCCTGACTGACGTCCTCCCCG
AGCTCCAGGCTTTATCCAGGGATACCTCCGCGTCGGGCTCCGCTTTGCTC
CTGAACGTGCTGGGGAGGTTGGAACACGACGCCCAGAACTTCAAGGCCGC
CAGTGACTTGTACACGCAGGCCTTGACCTTGCAGCCGAACAGTTCCACCA
TCTTCCAGAATCTGGGGGCGGCTTTTGCTTCCCAGGGGGAGCATCAGCTG
GCCTTTGCCTCCTTCCAACGGGCGATCGATTTGAATGCGAACGACCGTTA
CACGTATTTCAAACTCGGGATGATGTACGAACAGCTGGCGACGGGCAAGT
ACAAGGAAGCCGCCGAGCACGCCTTGAGTTGCTACGCGTTTTATGTGGAC
GGGCGGGAGGGCGGGGAGGACACAGACGCCCTGACCATCTACGGGAACTT
GCTGGTGAAGCGGTTGTGCCCCGCGGAGGCCGTCGAGGTGTACAAACGGG
CCTTGGCCCTGGAAGCAGGGCTTTGGAACGTCTGGTTCAACATGGCAAAT
GCCTATTTGAAGATTGGGGAGAAGGAAGAT back to top
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