EWM30007.1, cds665 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30007.1 vs. NCBI_GenBank
Match: gi|585112624|gb|EWM30007.1| (tetratricopeptide repeat family protein [Nannochloropsis gaditana]) HSP 1 Score: 1153.66 bits (2983), Expect = 0.000e+0 Identity = 569/569 (100.00%), Postives = 569/569 (100.00%), Query Frame = 0 Query: 1 MCIMFRPKCCTLSLLLLSHAVQTGAFLRPLPLFRLAPLPSTSPTRPLFLPRSPLSFTASSAPQEGQAPSVQSSPPSPLYDQQEGGWSYFHSVPRALPGGRTLREDRVSSESGEPFAGEEEGERGRQRRRLVLYGAQGEREGDLVFVESRGKSLHLETLQVKEGDATEGGGEAAAATLSPAHSLILGAMERFLNRGGRIGQVTVGDAGQEGRGLEPLQASATALGFRPIPPEGAPAKDKGQAGRPVLQGGLTDVLPELQALSRDTSASGSALLLNVLGRLEHDAQNFKAASDLYTQALTLQPNSSTIFQNLGAAFASQGEHQLAFASFQRAIDLNANDRYTYFKLGMMYEQLATGKYKEAAEHALSCYAFYVDGREGGEDTDALTIYGNLLVKRLCPAEAVEVYKRALALEAGLWNVWFNMANAYLKIGEKEDAIIALQQTLSLNPNVSAARHLLLSITGAQGGGEGGAAAPVEADPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFTEGAMGPVTPEGSGEALLRALNKSMRILDLGCGTVGWRWGRGGMKGGRGR 569 MCIMFRPKCCTLSLLLLSHAVQTGAFLRPLPLFRLAPLPSTSPTRPLFLPRSPLSFTASSAPQEGQAPSVQSSPPSPLYDQQEGGWSYFHSVPRALPGGRTLREDRVSSESGEPFAGEEEGERGRQRRRLVLYGAQGEREGDLVFVESRGKSLHLETLQVKEGDATEGGGEAAAATLSPAHSLILGAMERFLNRGGRIGQVTVGDAGQEGRGLEPLQASATALGFRPIPPEGAPAKDKGQAGRPVLQGGLTDVLPELQALSRDTSASGSALLLNVLGRLEHDAQNFKAASDLYTQALTLQPNSSTIFQNLGAAFASQGEHQLAFASFQRAIDLNANDRYTYFKLGMMYEQLATGKYKEAAEHALSCYAFYVDGREGGEDTDALTIYGNLLVKRLCPAEAVEVYKRALALEAGLWNVWFNMANAYLKIGEKEDAIIALQQTLSLNPNVSAARHLLLSITGAQGGGEGGAAAPVEADPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFTEGAMGPVTPEGSGEALLRALNKSMRILDLGCGTVGWRWGRGGMKGGRGR Sbjct: 1 MCIMFRPKCCTLSLLLLSHAVQTGAFLRPLPLFRLAPLPSTSPTRPLFLPRSPLSFTASSAPQEGQAPSVQSSPPSPLYDQQEGGWSYFHSVPRALPGGRTLREDRVSSESGEPFAGEEEGERGRQRRRLVLYGAQGEREGDLVFVESRGKSLHLETLQVKEGDATEGGGEAAAATLSPAHSLILGAMERFLNRGGRIGQVTVGDAGQEGRGLEPLQASATALGFRPIPPEGAPAKDKGQAGRPVLQGGLTDVLPELQALSRDTSASGSALLLNVLGRLEHDAQNFKAASDLYTQALTLQPNSSTIFQNLGAAFASQGEHQLAFASFQRAIDLNANDRYTYFKLGMMYEQLATGKYKEAAEHALSCYAFYVDGREGGEDTDALTIYGNLLVKRLCPAEAVEVYKRALALEAGLWNVWFNMANAYLKIGEKEDAIIALQQTLSLNPNVSAARHLLLSITGAQGGGEGGAAAPVEADPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFTEGAMGPVTPEGSGEALLRALNKSMRILDLGCGTVGWRWGRGGMKGGRGR 569
BLAST of EWM30007.1 vs. NCBI_GenBank
Match: gi|298714766|emb|CBJ25665.1| (Methyltransferase [Ectocarpus siliculosus]) HSP 1 Score: 273.863 bits (699), Expect = 2.374e-79 Identity = 164/381 (43.04%), Postives = 225/381 (59.06%), Query Frame = 0 Query: 181 HSLILGAMERFLNRGGRIGQ--VTVGDAGQEGRGLEPLQASATALGFRPIPPEGAPAKDKGQAGRPVLQGGLTDVLPELQA--LSRDTSASGSALLLNVLGRLEHDAQNFKAASDLYTQALTLQPNSSTIFQNLGAAFASQGEHQLAFASFQRAIDLNANDRYTYFKLGMMYEQLATGKYKEAAEHALSCYAFYVDGREGGEDTDALTIYGNLLVKRLCPAEAVEVYKRALALEAGLWNVWFNMANAYLKIGEKEDAIIALQQTLSLNPNVSA---ARHLLLSITGAQGGGEGGAAAPVEADP-AYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFTEGAMGPVTPEGSGEALLRALNKSMRILDLGCGT 553 H+L+ + RFLN G RI Q V + D+ Q + GF + + GR +L G L +QA D + A+++N++ RL HDA N + A D Y +AL L P S +F+ LG A+ SQG+HQ+AFAS+Q+AI+L D Y KLGM+YE LA GKY+EA +HA+ C+ +Y+ G EDTD LT GNL V RL P AVE Y+RALA++ L NVWFN+ANAYLK+GE+E+A L++ L L+P+ +A AR+LL S+ E E+D AY ELFDYYAP YD HM++ LLYT PR+LR+ +++V N T + + +G+ +L LN S+ ILDLGCGT Sbjct: 213 HALLDETINRFLNDGARISQLRVEIDDSPQS-------VDYYSRHGF-------IRSVEAASEGRVLLAGDRVAALGAIQASLTGGDDQGTVGAVVMNLMARLLHDAGNLQGAVDAYLKALELDPTRSEVFRGLGGAYQSQGQHQMAFASYQQAINLAPWDLLAYLKLGMLYEDLAVGKYEEAGDHAIRCFQYYLQ-HSGSEDTDVLTRLGNLQVMRLDPGSAVETYRRALAVDKSLSNVWFNLANAYLKLGEEEEAATCLKEKLRLDPDPNAGVSARYLLASL-------EADPGRLTESDQLAYARELFDYYAPKYDDHMRKKLLYTGPRLLRKNMKEVYNATF--QSFPDEIQSAHNGD-VLSYLNGSLDILDLGCGT 568
BLAST of EWM30007.1 vs. NCBI_GenBank
Match: gi|499456101|ref|WP_011143565.1| (hypothetical protein [Gloeobacter violaceus] >gi|37523145|ref|NP_926522.1| hypothetical protein gll3576 [Gloeobacter violaceus PCC 7421] >gi|35214148|dbj|BAC91517.1| gll3576 [Gloeobacter violaceus PCC 7421]) HSP 1 Score: 91.6633 bits (226), Expect = 6.484e-16 Identity = 81/290 (27.93%), Postives = 119/290 (41.03%), Query Frame = 0 Query: 274 NVLGRLEHDAQNFKAASDLYTQALTLQPNSSTIFQNLGAAFASQGEHQLAFASFQRAIDLNANDRYTYFKLGMMYEQLATGKYKEAAEHALSCYAFYVDGREGGEDTDALTIYGNLLVKRLCPAEA----------VEVYKRALALEAGLWNVWFNMANAYLKIGEKEDAIIALQQTLSLNPNVSAARHLLLSITGAQGGGEGGAAAPVEADPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFTEGAMGPVTPEGSGEALLRALNKSMRILDLGCGT 553 N LG ++ + N A Y +AL L+P+ NLG +G+ + A F+RA L + Y+ LG++ ++ A+S Y AL I G+L+ R+ A A +E ++RA+ L L + NA G +A + L L P+ + ARH L ++ GGA P DP YV LFD YA +D+H+ L Y AP +L GA+ TP G + +LDLGCGT Sbjct: 138 NNLGAVQRELGNLDDAIASYRRALALEPDYLEAHNNLGVVLRERGQLEEAALCFKRAFQLQPDFAEAYYNLGLLLHS------QQKLAEAISVY------------RTALIIKGDLVEARVNLAHALQASGQGDAAIEEHRRAVELAPALAEAHCGLGNALRDAGRLAEAAECYAEALRLKPDYAEARHYLAAV--------GGAPTPAMTDPDYVAALFDEYAERFDRHLTGELAYRAPELL--------------VGAVQAATPHTEG---------LLNVLDLGCGT 378
BLAST of EWM30007.1 vs. NCBI_GenBank
Match: gi|755598170|ref|WP_042525883.1| (hypothetical protein [Coxiella burnetii]) HSP 1 Score: 89.3521 bits (220), Expect = 4.493e-15 Identity = 80/269 (29.74%), Postives = 112/269 (41.64%), Query Frame = 0 Query: 285 NFKAASDLYTQALTLQPNSSTIFQNLGAAFASQGEHQLAFASFQRAIDLNANDRYTYFKLGMMYEQLATGKYKEAAEHALSCYAFYVDGREGGEDTDALTIYGNLLVKRLCPAEAVEVYKRALALEAGLWNVWFNMANAYLKIGEKEDAIIALQQTLSLNPNVSAARHLLLSITGAQGGGEGGAAAPVEADPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFTEGAMGPVTPEGSGEALLRALNKSMRILDLGCGT 553 +F A Y + L L+P ++ + G A + Q A F A+ LN ++ L Y L G +KEA H Y+ E + G L + + EA++ +K+AL L+ N+A YLKI + + AI + TL L PN S H+L ++ + AP A +YV LFD YA YDQH+ L Y P+ L Q V T G+A RILDLGCGT Sbjct: 187 DFSKAITYYEKRLALEPENADAQYDCGFAHLKDNQFQKAIDYFTNALLLNPEHPDCHYSLATAY--LQRGDHKEALXH-------YLRQLEKKPQIECYYNVGVLHMYQERHREAIDYFKQALTLDPNYREAHLNIAAVYLKINQIKQAIEHYESTLVLKPNDSEIEHILTALQKKE--------APPRAPDSYVRHLFDEYATYYDQHLTLHLQYQVPQKLYQAVE----------------TEWNGGKA-------EWRILDLGCGT 415
BLAST of EWM30007.1 vs. NCBI_GenBank
Match: gi|500791299|ref|WP_011997129.1| (hypothetical protein [Coxiella burnetii] >gi|154356705|gb|ABS78167.1| tetratricopeptide repeat family protein [Coxiella burnetii Dugway 5J108-111]) HSP 1 Score: 88.9669 bits (219), Expect = 5.040e-15 Identity = 80/269 (29.74%), Postives = 112/269 (41.64%), Query Frame = 0 Query: 285 NFKAASDLYTQALTLQPNSSTIFQNLGAAFASQGEHQLAFASFQRAIDLNANDRYTYFKLGMMYEQLATGKYKEAAEHALSCYAFYVDGREGGEDTDALTIYGNLLVKRLCPAEAVEVYKRALALEAGLWNVWFNMANAYLKIGEKEDAIIALQQTLSLNPNVSAARHLLLSITGAQGGGEGGAAAPVEADPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFTEGAMGPVTPEGSGEALLRALNKSMRILDLGCGT 553 +F A Y + L L+P ++ + G A + Q A F A+ LN ++ L Y L G +KEA H Y+ E + G L + + EA++ +K+AL L+ N+A YLKI + + AI + TL L PN S H+L ++ + AP A +YV LFD YA YDQH+ L Y P+ L Q V T G+A RILDLGCGT Sbjct: 187 DFSKAITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDHFTNALLLNPEHPDCHYSLATAY--LQRGDHKEALLH-------YLRQLEKKPQIECYYNVGVLHMYQERHREAIDYFKQALTLDPNYREAHLNIAAVYLKINQIKQAIEHYESTLVLKPNDSEIEHILTALQKKE--------APPRAPDSYVRHLFDEYATYYDQHLTLHLQYQVPQKLYQAVE----------------TEWNGGKA-------EWRILDLGCGT 415
BLAST of EWM30007.1 vs. NCBI_GenBank
Match: gi|750672212|ref|WP_040948096.1| (hypothetical protein [Coxiella burnetii] >gi|1181548167|gb|ARI65423.1| hypothetical protein B7L74_02845 [Coxiella burnetii] >gi|1185661847|gb|ARK26902.1| hypothetical protein BMW92_02760 [Coxiella burnetii]) HSP 1 Score: 88.9669 bits (219), Expect = 5.655e-15 Identity = 90/305 (29.51%), Postives = 125/305 (40.98%), Query Frame = 0 Query: 251 TDVLPELQALSRDTSASGSAL--LLNVLGRLEHDAQNFKAASDLYTQALTLQPNSSTIFQNLGAAFASQGEHQLAFASFQRAIDLNANDRYTYFKLGMMYEQLATGKYKEAAEHALSCYAFYVDGREGGEDTDALTIYGNLLVKRLCPAEAVEVYKRALALEAGLWNVWFNMANAYLKIGEKEDAIIALQQTLSLNPNVSAARHLLLSITGAQGGGEGGAAAPVEADPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFTEGAMGPVTPEGSGEALLRALNKSMRILDLGCGT 553 D L A+S SA+ S L + LG +F A Y + L L+P ++ + G A + Q A F A+ LN ++ L Y L G +KEA H Y+ E + G L + + EA++ +K+AL L+ N+A YLKI + + AI + TL L PN S H+L ++ + AP A +YV LFD YA YDQH+ L Y P+ L Q V T G+A RILDLGCGT Sbjct: 158 IDELKRTVAMSSHHSAAFSQLAHVYMYLG-------DFSKAITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPDCHYSLATAY--LQRGDHKEALLH-------YLRQLEKKPQIECYYNVGVLHMYQERHREAIDYFKQALTLDPNYREAHLNIAAVYLKINQIKQAIEHYESTLVLKPNDSEIEHILTALQKKE--------APPRAPDSYVRHLFDEYATYYDQHLTLHLQYQVPQKLYQAVE----------------TEWNGGKA-------EWRILDLGCGT 415
BLAST of EWM30007.1 vs. NCBI_GenBank
Match: gi|750671823|ref|WP_040947756.1| (hypothetical protein [Coxiella burnetii]) HSP 1 Score: 88.5817 bits (218), Expect = 6.690e-15 Identity = 80/269 (29.74%), Postives = 112/269 (41.64%), Query Frame = 0 Query: 285 NFKAASDLYTQALTLQPNSSTIFQNLGAAFASQGEHQLAFASFQRAIDLNANDRYTYFKLGMMYEQLATGKYKEAAEHALSCYAFYVDGREGGEDTDALTIYGNLLVKRLCPAEAVEVYKRALALEAGLWNVWFNMANAYLKIGEKEDAIIALQQTLSLNPNVSAARHLLLSITGAQGGGEGGAAAPVEADPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFTEGAMGPVTPEGSGEALLRALNKSMRILDLGCGT 553 +F A Y + L L+P ++ + G A + Q A F A+ LN ++ L Y L G +KEA H Y+ E + G L + + EA++ +K+AL L+ N+A YLKI + + AI + TL L PN S H+L ++ + AP A +YV LFD YA YDQH+ L Y P+ L Q V T G+A RILDLGCGT Sbjct: 187 DFSKAITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPDCHYSLATAY--LQRGDHKEALLH-------YLRQLEKKPQIECYYNVGVLHMYQERHREAIDYFKQALTLDPNYREAHLNIAAVYLKINQIKQAIEHYESTLVLKPNDSEIEHILTALQKKE--------APPRAPDSYVRHLFDEYATYYDQHLTLHLQYQVPQKLYQAVE----------------TEWNGGKA-------EWRILDLGCGT 415
BLAST of EWM30007.1 vs. NCBI_GenBank
Match: gi|501565817|ref|WP_012570265.1| (hypothetical protein [Coxiella burnetii] >gi|212011369|gb|ACJ18750.1| tetratricopeptide repeat family protein [Coxiella burnetii CbuG_Q212]) HSP 1 Score: 88.5817 bits (218), Expect = 6.870e-15 Identity = 80/269 (29.74%), Postives = 112/269 (41.64%), Query Frame = 0 Query: 285 NFKAASDLYTQALTLQPNSSTIFQNLGAAFASQGEHQLAFASFQRAIDLNANDRYTYFKLGMMYEQLATGKYKEAAEHALSCYAFYVDGREGGEDTDALTIYGNLLVKRLCPAEAVEVYKRALALEAGLWNVWFNMANAYLKIGEKEDAIIALQQTLSLNPNVSAARHLLLSITGAQGGGEGGAAAPVEADPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFTEGAMGPVTPEGSGEALLRALNKSMRILDLGCGT 553 +F A Y + L L+P ++ + G A + Q A F A+ LN ++ L Y L G +KEA H Y+ E + G L + + EA++ +K+AL L+ N+A YLKI + + AI + TL L PN S H+L ++ + AP A +YV LFD YA YDQH+ L Y P+ L Q V T G+A RILDLGCGT Sbjct: 187 DFSKAITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPDCHYSLATAY--LQRGDHKEALLH-------YLRQLEKKPQIECYYNVGVLHMYQERHREAIDYFKQALILDPNYREAHLNIAAVYLKINQIKQAIEHYESTLVLKPNDSEIEHILTALQKKE--------APPHAPDSYVRHLFDEYATYYDQHLTLHLQYQVPQKLYQAVE----------------TEWNGGKA-------EWRILDLGCGT 415
BLAST of EWM30007.1 vs. NCBI_GenBank
Match: gi|499260113|ref|WP_010957653.1| (hypothetical protein [Coxiella burnetii] >gi|29653887|ref|NP_819579.1| tetratricopeptide repeat family protein [Coxiella burnetii RSA 493] >gi|29541150|gb|AAO90093.1| tetratricopeptide repeat family protein [Coxiella burnetii RSA 493] >gi|161763462|gb|ABX79104.1| tetratricopeptide repeat protein/methyltransferase [Coxiella burnetii RSA 331] >gi|796966810|gb|KJY14957.1| hypothetical protein VO67_02830 [Coxiella burnetii] >gi|1000818739|gb|AML49523.1| hypothetical protein AUR58_10395 [Coxiella burnetii] >gi|1000829101|gb|AML55434.1| hypothetical protein AYM38_09405 [Coxiella burnetii]) HSP 1 Score: 88.5817 bits (218), Expect = 6.870e-15 Identity = 80/269 (29.74%), Postives = 112/269 (41.64%), Query Frame = 0 Query: 285 NFKAASDLYTQALTLQPNSSTIFQNLGAAFASQGEHQLAFASFQRAIDLNANDRYTYFKLGMMYEQLATGKYKEAAEHALSCYAFYVDGREGGEDTDALTIYGNLLVKRLCPAEAVEVYKRALALEAGLWNVWFNMANAYLKIGEKEDAIIALQQTLSLNPNVSAARHLLLSITGAQGGGEGGAAAPVEADPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFTEGAMGPVTPEGSGEALLRALNKSMRILDLGCGT 553 +F A Y + L L+P ++ + G A + Q A F A+ LN ++ L Y L G +KEA H Y+ E + G L + + EA++ +K+AL L+ N+A YLKI + + AI + TL L PN S H+L ++ + AP A +YV LFD YA YDQH+ L Y P+ L Q V T G+A RILDLGCGT Sbjct: 187 DFSKAITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPDCHYSLATAY--LQRGDHKEALLH-------YLRQLEKKPQIECYYNVGVLHMYQERHREAIDYFKQALTLDPNYREAHLNIAAVYLKINQIKQAIEHYESTLVLKPNDSEIEHILTALQKKE--------APPRAPDSYVRHLFDEYATYYDQHLTLHLQYQVPQKLYQAVE----------------TEWNGGKA-------EWRILDLGCGT 415
BLAST of EWM30007.1 vs. NCBI_GenBank
Match: gi|492183623|ref|WP_005772829.1| (hypothetical protein [Coxiella burnetii] >gi|165916673|gb|EDR35277.1| tetratricopeptide repeat protein/methyltransferase [Coxiella burnetii Q321] >gi|697780920|gb|AIT63544.1| Tetratricopeptide repeat family protein [Coxiella burnetii str. Namibia]) HSP 1 Score: 88.5817 bits (218), Expect = 7.984e-15 Identity = 80/269 (29.74%), Postives = 112/269 (41.64%), Query Frame = 0 Query: 285 NFKAASDLYTQALTLQPNSSTIFQNLGAAFASQGEHQLAFASFQRAIDLNANDRYTYFKLGMMYEQLATGKYKEAAEHALSCYAFYVDGREGGEDTDALTIYGNLLVKRLCPAEAVEVYKRALALEAGLWNVWFNMANAYLKIGEKEDAIIALQQTLSLNPNVSAARHLLLSITGAQGGGEGGAAAPVEADPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFTEGAMGPVTPEGSGEALLRALNKSMRILDLGCGT 553 +F A Y + L L+P ++ + G A + Q A F A+ LN ++ L Y L G +KEA H Y+ E + G L + + EA++ +K+AL L+ N+A YLKI + + AI + TL L PN S H+L ++ + AP A +YV LFD YA YDQH+ L Y P+ L Q V T G+A RILDLGCGT Sbjct: 187 DFSKAITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPDCHYSLATAY--LQRGDHKEALIH-------YLRQLEKKPQIECYYNVGVLHMYQERHREAIDYFKQALTLDPNYREAHLNIAAVYLKINQIKQAIEHYESTLVLKPNDSEIEHILTALQKKE--------APPRAPDSYVRHLFDEYATYYDQHLTLHLQYQVPQKLYQAVE----------------TEWNGGKA-------EWRILDLGCGT 415 The following BLAST results are available for this feature:
BLAST of EWM30007.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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