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Properties
| Property Name | Value |
|---|
| Product | Poly A polymerase, head domain protein |
| Orig transcript id | gnl|cribi|Naga_101251g2.4539.mrna |
| Orig protein id | gnl|cribi|Naga_101251g2.4539 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:170813..172472 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6649 ID=rna6649|Name=rna6649|organism=Nannochloropsis gaditana|type=mRNA|length=798bp
ATGGAATTGGGCCTTCGGTTCCGACATTGGGGTCTGTCACCCGCGGAAGT
GCGCCTGGCGCTCTATGCGGCTTTGCTGCTGCCGTTAGCGAACCTTAGGT
ACCGGGAAAAGACGGGGAAAAAGTTGAATTTGAATTTAAACAAGAAGCCG
CTGGAAGTGAGTCGTTACGTGTTCGCCCGCATGCTGAAGATGAAGGCTAA
GGACGCGGACAAGTTGATTCTGCTCCATCAAGTCGTGGATGGCTTCGTCC
CTTTTCTGGAGGAAGGCAAGAAGGGAAGGAGGGAAGGAGGGAAGGAGGGG
GGAATGGAGGCGCGGTTGAAACGGGAGCAGATAGGAGGGTTGATGCTGCA
GGGGGGCTCGGGGGGGGAAGGACGGGATAGAGGGGAGGGACGGGTCAGGG
GGGAGGGGGAAGGGGAGGGGAAATTCTCCTACCGACAGGCGGCCTTGCAG
GTATCCGACTACATCCAATCCGCGGGGCTGTCAGAGATCTACCTACAAGC
CCCTCCGCTGGATGGAGAAGGCTTGCGAAGGGTCCTCCCTGGTATTCCCC
ACGGCCCGCCCTTTCGCCTTGTCATGGATGCGCAGGTGGGCATCTGGCTG
AGGGAGCCGGAGGAGGGGCGGAGGGGGGGGCTGTACATAAGACGATCACG
GCGTTTAGACTTACCAAAAACACTGAATGGTCTCGACACCACAAAAGAAA
GAAGAAAACAGTATGGATCTACCTCGGACAATTCAGATCGTTTGATCTTC
CCTGCTTCCGATTCTTTGTGCTGCCTGAGCTCCTTGGCAGAGAAATGA back to topprotein sequence of rna6649 >rna6649-protein ID=rna6649-protein|Name=rna6649|organism=Nannochloropsis gaditana|type=polypeptide|length=416bp
MLTKHPSTLRAPVPTHSCRTGGTHDMRAMFVPFTRLSPFPFIYLLVMMLA
SSTVVSSLRRSYSLAMTSTAAATGTLLLPQKSHMRFMPAFVALPPLSLAP
LPLHACGSKMGSGVPDFWLTGGSPKASSSCQSRPQAPSSRLAAVVSRSTS
RSKATSSIDKRTAGVGGGDGMDTAGGRESPSIPLSPAESRLFKTMLAVVK
DENLGTTLRVAGGWVRDKVLGHWSADGEVDIDIALDNLMGSDFAAMLNGW
LAKRGRQVYNVGIISANPTKSKHLETATMRVGSFSIDFVNLRTEAYTDES
RIPSMGIGSPEEDAMRRDLTINALFYNLHTGQIEDFCGRGLRDMREGVIR
TPLPALTTLLDDPLRVLRAVRFASRLAFSISDELVVAASDPRVHGALAHK
VSRERIGSEKRFFPSL back to topmRNA from alignment at CM002469.1:170813..172472- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6649 ID=rna6649|Name=rna6649|organism=Nannochloropsis gaditana|type=mRNA|length=1660bp|location=Sequence derived from alignment at CM002469.1:170813..172472- (Nannochloropsis gaditana)
ATGCTGTCGTCCACACATGCCCAACATTGTTTCCTTGAAGCCTCCGGCTG
TCCCGAGTGTGTTGGGTGGATAGTTGTGGAGTTCCAGCCCCCCAAATCCT
TAGGGCCCGTCTGCCATGTGTGACGGGGAATGAGAAAGTGCTTCTCCCTC
ATGCCCTTCAACTATCTCCCGCACACACAGCACCAAGCACCCAAGTACCC
TCCGCGCTCCTGTACCGACGCACAGTTGTCGGACGGGTGGCACGCATGAT
ATGAGGGCGATGTTCGTGCCCTTTACACGTCTGTCGCCTTTCCCCTTCAT
TTATCTCCTCGTAATGATGCTGGCCTCCTCCACTGTGGTCAGCTCCCTTC
GCCGTTCCTACAGCCTGGCCATGACTAGCACAGCCGCAGCGACTGGGACC
TTGTTACTTCCCCAAAAATCTCACATGCGCTTTATGCCGGCTTTTGTTGC
CCTCCCTCCCCTCTCCTTGGCCCCACTGCCCCTCCATGCATGCGGCAGCA
AGATGGGCTCCGGCGTCCCCGACTTCTGGCTCACGGGGGGAAGCCCGAAG
GCGAGCAGCAGTTGTCAAAGTCGTCCCCAGGCGCCTTCCTCGCGCCTTGC
GGCGGTCGTTTCCAGAAGCACCAGCCGGAGCAAGGCCACTTCCAGCATCG
ACAAGCGCACCGCGGGAGTGGGCGGAGGAGACGGCATGGATACTGCGGGG
GGGCGCGAATCTCCTTCCATCCCTTTGTCCCCGGCGGAGAGCAGGCTCTT
CAAAACCATGCTGGCCGTGGTGAAAGACGAGAATCTTGGAACGACCTTGC
GGGTGGCGGGGGGCTGGGTGCGGGACAAGGTGTTGGGGCACTGGAGTGCA
GATGGCGAGGTAGATATTGACATTGCCTTGGACAACTTGATGGGCTCTGA
CTTCGCCGCGATGCTGAACGGGTGGCTGGCTAAGCGGGGGCGTCAAGTGT
ACAATGTGGGGATCATCAGCGCGAACCCGACGAAGAGCAAGCATTTGGAA
ACGGCGACCATGCGGGTGGGCTCCTTTTCCATCGACTTTGTGAACCTGCG
GACAGAGGCGTACACGGACGAGTCTCGCATTCCATCCATGGGCATAGGAA
GTCCAGAGGAGGATGCCATGAGGTAGGGACAGAGGGAGGAAGGGAGGAAG
GGAGGGAGAGGGGAAGAGCGAAACGTGCGGTCGCCAGGCGGCGGTGAGGG
TCCGACTGTCGGGTTTAGCGTTCTGATCAAGTACCGCGTTGCTTTGACTT
AACATTTGCCTGCCCTGTGGCATTTCACGGGCACAGGCGTGACTTGACCA
TCAACGCCCTCTTCTACAACCTGCACACGGGCCAAATCGAAGACTTCTGC
GGACGGGGCCTTCGGGACATGCGGGAAGGCGTGATCCGGACCCCCCTCCC
CGCCCTCACCACCCTCCTAGACGACCCCCTCCGCGTGCTCCGGGCCGTGC
GCTTCGCTTCCCGTCTGGCTTTTTCCATCAGCGACGAACTCGTCGTCGCC
GCCTCGGACCCCCGGGTGCACGGGGCCTTGGCCCATAAAGTCAGCCGGGA
GCGGATCGGATCGGAGGTCGATCTGATGATGCGGAGCGGGCAACCGGCGC
GGGCGATGGGCTTGATTGCCGAACTGGGTCTGGCAGAAACGGTTTTTCCC
GTCCCTTTGA back to topCoding sequence (CDS) from alignment at CM002469.1:170813..172472- >rna6649 ID=rna6649|Name=rna6649|organism=Nannochloropsis gaditana|type=CDS|length=5004bp|location=Sequence derived from alignment at CM002469.1:170813..172472- (Nannochloropsis gaditana)
AAACGGTTTTTCCCGTCCCTTTGAGCGTGACTTGACCATCAACGCCCTCT
TCTACAACCTGCACACGGGCCAAATCGAAGACTTCTGCGGACGGGGCCTT
CGGGACATGCGGGAAGGCGTGATCCGGACCCCCCTCCCCGCCCTCACCAC
CCTCCTAGACGACCCCCTCCGCGTGCTCCGGGCCGTGCGCTTCGCTTCCC
GTCTGGCTTTTTCCATCAGCGACGAACTCGTCGTCGCCGCCTCGGACCCC
CGGGTGCACGGGGCCTTGGCCCATAAAGTCAGCCGGGAGCGGATCGGATC
GGAGCACCAAGCACCCAAGTACCCTCCGCGCTCCTGTACCGACGCACAGT
TGTCGGACGGGTGGCACGCATGATATGAGGGCGATGTTCGTGCCCTTTAC
ACGTCTGTCGCCTTTCCCCTTCATTTATCTCCTCGTAATGATGCTGGCCT
CCTCCACTGTGGTCAGCTCCCTTCGCCGTTCCTACAGCCTGGCCATGACT
AGCACAGCCGCAGCGACTGGGACCTTGTTACTTCCCCAAAAATCTCACAT
GCGCTTTATGCCGGCTTTTGTTGCCCTCCCTCCCCTCTCCTTGGCCCCAC
TGCCCCTCCATGCATGCGGCAGCAAGATGGGCTCCGGCGTCCCCGACTTC
TGGCTCACGGGGGGAAGCCCGAAGGCGAGCAGCAGTTGTCAAAGTCGTCC
CCAGGCGCCTTCCTCGCGCCTTGCGGCGGTCGTTTCCAGAAGCACCAGCC
GGAGCAAGGCCACTTCCAGCATCGACAAGCGCACCGCGGGAGTGGGCGGA
GGAGACGGCATGGATACTGCGGGGGGGCGCGAATCTCCTTCCATCCCTTT
GTCCCCGGCGGAGAGCAGGCTCTTCAAAACCATGCTGGCCGTGGTGAAAG
ACGAGAATCTTGGAACGACCTTGCGGGTGGCGGGGGGCTGGGTGCGGGAC
AAGGTGTTGGGGCACTGGAGTGCAGATGGCGAGGTAGATATTGACATTGC
CTTGGACAACTTGATGGGCTCTGACTTCGCCGCGATGCTGAACGGGTGGC
TGGCTAAGCGGGGGCGTCAAGTGTACAATGTGGGGATCATCAGCGCGAAC
CCGACGAAGAGCAAGCATTTGGAAACGGCGACCATGCGGGTGGGCTCCTT
TTCCATCGACTTTGTGAACCTGCGGACAGAGGCGTACACGGACGAGTCTC
GCATTCCATCCATGGGCATAGGAAGTCCAGAGGAGGATGCCATGAGATGC
TAAACGGTTTTTCCCGTCCCTTTGAGCGTGACTTGACCATCAACGCCCTC
TTCTACAACCTGCACACGGGCCAAATCGAAGACTTCTGCGGACGGGGCCT
TCGGGACATGCGGGAAGGCGTGATCCGGACCCCCCTCCCCGCCCTCACCA
CCCTCCTAGACGACCCCCTCCGCGTGCTCCGGGCCGTGCGCTTCGCTTCC
CGTCTGGCTTTTTCCATCAGCGACGAACTCGTCGTCGCCGCCTCGGACCC
CCGGGTGCACGGGGCCTTGGCCCATAAAGTCAGCCGGGAGCGGATCGGAT
CGGAGCACCAAGCACCCAAGTACCCTCCGCGCTCCTGTACCGACGCACAG
TTGTCGGACGGGTGGCACGCATGATATGAGGGCGATGTTCGTGCCCTTTA
CACGTCTGTCGCCTTTCCCCTTCATTTATCTCCTCGTAATGATGCTGGCC
TCCTCCACTGTGGTCAGCTCCCTTCGCCGTTCCTACAGCCTGGCCATGAC
TAGCACAGCCGCAGCGACTGGGACCTTGTTACTTCCCCAAAAATCTCACA
TGCGCTTTATGCCGGCTTTTGTTGCCCTCCCTCCCCTCTCCTTGGCCCCA
CTGCCCCTCCATGCATGCGGCAGCAAGATGGGCTCCGGCGTCCCCGACTT
CTGGCTCACGGGGGGAAGCCCGAAGGCGAGCAGCAGTTGTCAAAGTCGTC
CCCAGGCGCCTTCCTCGCGCCTTGCGGCGGTCGTTTCCAGAAGCACCAGC
CGGAGCAAGGCCACTTCCAGCATCGACAAGCGCACCGCGGGAGTGGGCGG
AGGAGACGGCATGGATACTGCGGGGGGGCGCGAATCTCCTTCCATCCCTT
TGTCCCCGGCGGAGAGCAGGCTCTTCAAAACCATGCTGGCCGTGGTGAAA
GACGAGAATCTTGGAACGACCTTGCGGGTGGCGGGGGGCTGGGTGCGGGA
CAAGGTGTTGGGGCACTGGAGTGCAGATGGCGAGGTAGATATTGACATTG
CCTTGGACAACTTGATGGGCTCTGACTTCGCCGCGATGCTGAACGGGTGG
CTGGCTAAGCGGGGGCGTCAAGTGTACAATGTGGGGATCATCAGCGCGAA
CCCGACGAAGAGCAAGCATTTGGAAACGGCGACCATGCGGGTGGGCTCCT
TTTCCATCGACTTTGTGAACCTGCGGACAGAGGCGTACACGGACGAGTCT
CGCATTCCATCCATGGGCATAGGAAGTCCAGAGGAGGATGCCATGAGATG
CTAAACGGTTTTTCCCGTCCCTTTGAGCGTGACTTGACCATCAACGCCCT
CTTCTACAACCTGCACACGGGCCAAATCGAAGACTTCTGCGGACGGGGCC
TTCGGGACATGCGGGAAGGCGTGATCCGGACCCCCCTCCCCGCCCTCACC
ACCCTCCTAGACGACCCCCTCCGCGTGCTCCGGGCCGTGCGCTTCGCTTC
CCGTCTGGCTTTTTCCATCAGCGACGAACTCGTCGTCGCCGCCTCGGACC
CCCGGGTGCACGGGGCCTTGGCCCATAAAGTCAGCCGGGAGCGGATCGGA
TCGGAGCACCAAGCACCCAAGTACCCTCCGCGCTCCTGTACCGACGCACA
GTTGTCGGACGGGTGGCACGCATGATATGAGGGCGATGTTCGTGCCCTTT
ACACGTCTGTCGCCTTTCCCCTTCATTTATCTCCTCGTAATGATGCTGGC
CTCCTCCACTGTGGTCAGCTCCCTTCGCCGTTCCTACAGCCTGGCCATGA
CTAGCACAGCCGCAGCGACTGGGACCTTGTTACTTCCCCAAAAATCTCAC
ATGCGCTTTATGCCGGCTTTTGTTGCCCTCCCTCCCCTCTCCTTGGCCCC
ACTGCCCCTCCATGCATGCGGCAGCAAGATGGGCTCCGGCGTCCCCGACT
TCTGGCTCACGGGGGGAAGCCCGAAGGCGAGCAGCAGTTGTCAAAGTCGT
CCCCAGGCGCCTTCCTCGCGCCTTGCGGCGGTCGTTTCCAGAAGCACCAG
CCGGAGCAAGGCCACTTCCAGCATCGACAAGCGCACCGCGGGAGTGGGCG
GAGGAGACGGCATGGATACTGCGGGGGGGCGCGAATCTCCTTCCATCCCT
TTGTCCCCGGCGGAGAGCAGGCTCTTCAAAACCATGCTGGCCGTGGTGAA
AGACGAGAATCTTGGAACGACCTTGCGGGTGGCGGGGGGCTGGGTGCGGG
ACAAGGTGTTGGGGCACTGGAGTGCAGATGGCGAGGTAGATATTGACATT
GCCTTGGACAACTTGATGGGCTCTGACTTCGCCGCGATGCTGAACGGGTG
GCTGGCTAAGCGGGGGCGTCAAGTGTACAATGTGGGGATCATCAGCGCGA
ACCCGACGAAGAGCAAGCATTTGGAAACGGCGACCATGCGGGTGGGCTCC
TTTTCCATCGACTTTGTGAACCTGCGGACAGAGGCGTACACGGACGAGTC
TCGCATTCCATCCATGGGCATAGGAAGTCCAGAGGAGGATGCCATGAGAT
GCTAAACGGTTTTTCCCGTCCCTTTGAGCGTGACTTGACCATCAACGCCC
TCTTCTACAACCTGCACACGGGCCAAATCGAAGACTTCTGCGGACGGGGC
CTTCGGGACATGCGGGAAGGCGTGATCCGGACCCCCCTCCCCGCCCTCAC
CACCCTCCTAGACGACCCCCTCCGCGTGCTCCGGGCCGTGCGCTTCGCTT
CCCGTCTGGCTTTTTCCATCAGCGACGAACTCGTCGTCGCCGCCTCGGAC
CCCCGGGTGCACGGGGCCTTGGCCCATAAAGTCAGCCGGGAGCGGATCGG
ATCGGAGCACCAAGCACCCAAGTACCCTCCGCGCTCCTGTACCGACGCAC
AGTTGTCGGACGGGTGGCACGCATGATATGAGGGCGATGTTCGTGCCCTT
TACACGTCTGTCGCCTTTCCCCTTCATTTATCTCCTCGTAATGATGCTGG
CCTCCTCCACTGTGGTCAGCTCCCTTCGCCGTTCCTACAGCCTGGCCATG
ACTAGCACAGCCGCAGCGACTGGGACCTTGTTACTTCCCCAAAAATCTCA
CATGCGCTTTATGCCGGCTTTTGTTGCCCTCCCTCCCCTCTCCTTGGCCC
CACTGCCCCTCCATGCATGCGGCAGCAAGATGGGCTCCGGCGTCCCCGAC
TTCTGGCTCACGGGGGGAAGCCCGAAGGCGAGCAGCAGTTGTCAAAGTCG
TCCCCAGGCGCCTTCCTCGCGCCTTGCGGCGGTCGTTTCCAGAAGCACCA
GCCGGAGCAAGGCCACTTCCAGCATCGACAAGCGCACCGCGGGAGTGGGC
GGAGGAGACGGCATGGATACTGCGGGGGGGCGCGAATCTCCTTCCATCCC
TTTGTCCCCGGCGGAGAGCAGGCTCTTCAAAACCATGCTGGCCGTGGTGA
AAGACGAGAATCTTGGAACGACCTTGCGGGTGGCGGGGGGCTGGGTGCGG
GACAAGGTGTTGGGGCACTGGAGTGCAGATGGCGAGGTAGATATTGACAT
TGCCTTGGACAACTTGATGGGCTCTGACTTCGCCGCGATGCTGAACGGGT
GGCTGGCTAAGCGGGGGCGTCAAGTGTACAATGTGGGGATCATCAGCGCG
AACCCGACGAAGAGCAAGCATTTGGAAACGGCGACCATGCGGGTGGGCTC
CTTTTCCATCGACTTTGTGAACCTGCGGACAGAGGCGTACACGGACGAGT
CTCGCATTCCATCCATGGGCATAGGAAGTCCAGAGGAGGATGCCATGAGA
TGCT back to top
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