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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100280g9.2294.mrna |
| Orig protein id | gnl|cribi|Naga_100280g9.2294 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:168203..169691 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6647 ID=rna6647|Name=rna6647|organism=Nannochloropsis gaditana|type=mRNA|length=1978bp
TCATCCAAAATTCATGCATCTTTTCCTGTTGTTTTTCGCTCACATGACAA
TTTTGTCATTGCATGAATAGATTTCCTGGGAAAATGCCTCGGGAAGTCAT
CACGCTGCAAGTGGGCCAGGCAGGGAACCAGATAGGTCGACGCTTTTGGG
AGCAGGCCCTTGAAGAACATTGCCAACCCGACGAGGACGATGACCACGGT
GAATTGAAATTTACGGACAGCATGTCTTCATTTTTTCATCTTCACGACAA
CGATGATTTGATATGTGGGACTGCTAGGAAAGTCCGGGATCGTATTGTCA
AACCTGGCGCTCTAAAAGCGCGGGCCGTATTAGTAGACATGGAGGAGGGC
CCGGTCACGGAGACCCTTCGAGGACCTTTACGAGGACTTTTTGACAGCCA
TCAATCATTAACAGACGTCTCAGGGGCGGGAAATAATTTTGCACACGGCC
ATCACTGTTATGGACCGCAATATGGGGAGAGTGTTTTGGAAGCTGTTCGT
CAGGCGGCAGAGCTGTGCGACTCACTGCAATCCTTTTTCCTGATGCATTC
TTTGGGAGGAGGAACTGGCTCTGGCCTCGGCACATACATACTGACATTGT
TGGAAGACGACTTTCCGCAAGTCCACCGTTTCGTAACGGCTATTTTTCCT
TCGGAGGATGACGACGTGGTCACCTCGCCCTATAACAGCGTCTTGGCTCT
GCAGCAACTAACGGCGCACGCGGACTGTGTTCTCCCCGTGGAAAATCAGT
CCTTGATGACCTTGGCCGCCCCCTTTCCATGGGTGACCAGATCCGGCAGC
ACGGTCGCGGGGTTTCACCGGCCGTCGACCATGGATCGGCTACTCGCGCC
TCCCTGCCCTCCGGTGGGATTGCCCAAGGAAGGAAAAATGCGGCCTCTGC
CGCGGCCCACACCAACGGCCGCACCGGCTCCAGCTGCAGCCGCTCTGCGG
GGGGCAGCCGGTGGATTGGAGCAGGCAGCCGAGCGGCCAGCGTGTGGTTT
CGATGGCATGAACGATTTGGTGGCCAGGCTGCTACTGGACCTGACGGCCT
CCATGCGGTTCGGCGGCGAGTTGAACGTGGATCTCAACGAGATCACCACC
AACCTCGTCCCCTACCCTCGGCTGCACTATCTCATGTCCAGCCTGAGCCT
GTCTTCGTCGACCGGTACTTCCCGCAACAATGCTCAGGAATGGGAACCGC
TGGGCAGTGCTCAAGCCGCAGCCTCTCTCCATTTGCGTCAAATCTGCTCG
AAAGTCTTCGCCCGGGAGAATCAGCTCTTGCGTGCCGATCCACGGCAAGG
GTCCGTCCTGGCGTGCGCCCTTCTCTTTCGGGGACAGGAGCTCTCCCTTG
CAGACGTGACAGAAAACGTCAAAAAACTGCAGCGGGAAATGAACATGGCG
TCGTGGAACAAGGACGGATTTAAAATCGGCCTCTGTCAAGCTACGGGCTC
TTCCTCCTCCCCAACGTCCTCTGGGCCTCCCCCTCCACCTTCCTTGCTTT
CTCTGACGAACAACAGCTGCGTGACTAGCACGTTCTTGCGTCTGCTCGGG
CGGTTTCAGAAGCTTTACCGACGCCGGGCGATGGTGCATCACTACGCCGA
ATATATGGACGTTACCCTTCTGGAGGAGGCGAGGGAGGACTTGCGCGGGC
TGATCGAGGAGTACCACGGGGTTGGAGCGAGAGGAAAAGCGGTAGGGAGG
AGGGTGACAGGCTGTGGGGCGGGCTCGCTTGTTGCTTGAGCCGGTGCTAA
GCAGGGGCTGGTGAGCAAAGTGAGAACATTTGGGACCTACCAGGCCGTAC
CGCGATCGGAAAATGGCGGACCTTTAAGGTCCTGCTACTTGAGAATATAT
AGTAACGTCAAGGCGACGCAAAAGTTGACGAAAAGGCGACGCAAAAGTAT
ATTTGAAGGGCAACACAATAACTTCTGCCTAATGGATGCGGAAACACATG
AATTCACGGGCAGGAATCACAGCATTCC back to topprotein sequence of rna6647 >rna6647-protein ID=rna6647-protein|Name=rna6647|organism=Nannochloropsis gaditana|type=polypeptide|length=310bp
MMVSSRVDEEERLLPSVVAVGLMSTPHTVEDKEEDDVPVEVREHVGELGR
HYRALSKRHVSCLSLLAAALIFLENDDVSLLLKKACLALFISSYADYFIK
PSPLLDDVTVRLHVDDLIRPVSDKLVWSSCVYGIAGVYSLYLGQYAFGTL
QIVTCAGSSLYHIRKEAVFFNFDNTFASSLLFLTLYAGCMAIHVQDWTHC
FATVVGLPIAVFLIVFCGMPASLAREHRHGPGFRQCAGRQYDDWHTAWHF
VSGAGTVVTAHFFQKHWPGLQCGGSNFGVLPHLPVVPTACVAFALSLNIV
GNWAGVMPVC back to topmRNA from alignment at CM002469.1:168203..169691+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6647 ID=rna6647|Name=rna6647|organism=Nannochloropsis gaditana|type=mRNA|length=1489bp|location=Sequence derived from alignment at CM002469.1:168203..169691+ (Nannochloropsis gaditana)
ACAGCATTTAATCAGTCACATCTCACGCCaggtcagggaggagaagcatt
TGCGGCAAGCACCGTGAGGCCTGCGATGATGGTATCAAGCCGcgtcgacg
aagaggagcgcTTGCTACCATCGGTGGTTGCTGTAGGACTCATGTCTACG
CCACATacggtggaggacaaggaggaggatgacgtgCCTGTCGAGGTCCG
GGAGCATGTAGGCGAGCTCGGTCGGCATTACAGAGCGCTGAGCAAACGCC
ACGTCTCATGTTTAAGCTTGCTGGCTGCGGCCCTCATATTTTTGGAAAAT
GACGACGTGAGGTGAGTTCGTCGACGGTCGTTGATTCGAGGAATAGAATC
TTGAGCACACGGAGTGGAAGGGAGGTCACTATGGGACTGAAAGCCAAGTC
ATTACAAGAAAGGCCAAATCAGACATGAAGTAGCAGCACTCTATGGTCCC
ATCCTTCTTTCATCCAGGTTGTCCTCTACATGCTCTGAAACACAAGatct
catccctctcctcaaAACAGTTTGCTCCTGAAGAAAGCCTGCCTTGCCCT
TTTTATCAGCTCATACGCCGACTACTTCATCAAGCCCTCGCCCCTTTTGG
ACGACGTGACGGTACGCCTGCACGTGGACGACCTTATACGGCCTGTCTCT
GACAAGCTCGTCTGGTCATCTTGCGTGTACGGTATCGCTGGCGTTTATTC
CCTGTATTTGGGACAATACGCCTTCGGGACCTTGCAAATCGTCACATGCG
CCGGATCCAGCCTCTATCATATTCGGAAGGAGGCTGTCTTTTTTAACTTT
GACAACACctttgcctcttcccttctcttcctcacccTGTATGCGGGGTG
TATGGCGATCCATGTGCAGGACTGGACCCACTGCTTCGCCACCGTGGTCG
GTCTCCCGATAGCCGTCTTTTTGATCGTCTTCTGTGGCATGCCCGCCTCT
CTGGCCCGGGAGCATAGACACGGCCCCGGGTTCCGGCAGTGCGCGGGCCG
CCAGTACGATGATTGGCACACGGCCTGGCACTTTGTCTCCGGGGCAGGGA
CGGTGGTGACGGCGCATTTCTTCCAGAAGCATTGGCCGGGTCTTCAATGC
GGGGGCTCCAATTTCGGCGTCTTGCCCCACCTACCCGTGGTTCCAACGGC
CTGCGTGGCCTTTGCCTTGTCCTTGAACATCGTCGGGAACTGGGCGGGTG
TCATGCCCGTGTgctaggagggagggggagaggggggggagggaggaaat
ggcagaggaggacatggaatggggaagaagaaagggttTTCAGGGCCACC
TTGTAGCTTGTCTGCCCGGtaaaagggggagagggatgggcgagaagagg
gggaaaggaggggcagtgTAACGTAGATAGTGTAGATATGCAAAATTTTG
GAATCCAGGATCACTTTCATTTCTCTGCCAAGGAGCTCAGGCAGCACAAA
GAATCGGAAGCAGGGAAGATCAAACGATCTGAATTGTCC back to topCoding sequence (CDS) from alignment at CM002469.1:168203..169691+ >rna6647 ID=rna6647|Name=rna6647|organism=Nannochloropsis gaditana|type=CDS|length=1866bp|location=Sequence derived from alignment at CM002469.1:168203..169691+ (Nannochloropsis gaditana)
ATGATGGTATCAAGCCGcgtcgacgaagaggagcgcTTGCTACCATCGGT
GGTTGCTGTAGGACTCATGTCTACGCCACATacggtggaggacaaggagg
aggatgacgtgCCTGTCGAGGTCCGGGAGCATGTAGGCGAGCTCGGTCGG
CATTACAGAGCGCTGAGCAAACGCCACGTCTCATGTTTAAGCTTGCTGGC
TGCGGCCCTCATATTTTTGGAAAATGACGACGTGAGTTTGCTCCTGAAGA
AAGCCTGCCTTGCCCTTTTTATCAGCTCATACGCCGACTACTTCATCAAG
CCCTCGCCCCTTTTGGACGACGTGACGGTACGCCTGCACGTGGACGACCT
TATACGGCCTGTCTCTGACAAGCTCGTCTGGTCATCTTGCGTGTACGGTA
TCGCTGGCGTTTATTCCCTGTATTTGGGACAATACGCCTTCGGGACCTTG
CAAATCGTCACATGCGCCGGATCCAGCCTCTATCATATTCGGAAGGAGGC
TGTCTTTTTTAACTTTGACAACACctttgcctcttcccttctcttcctca
cccTGTATGCGGGGTGTATGGCGATCCATGTGCAGGACTGGACCCACTGC
TTCGCCACCGTGGTCGGTCTCCCGATAGCCGTCTTTTTGATCGTCTTCTG
TGGCATGCCCGCCTCTCTGGCCCGGGAGCATAGACACGGCCCCGGGTTCC
GGCAGTGCGCGGGCCGCCAGTACGATGATTGGCACACGGCCTGGCACTTT
GTCTCCGGGGCAGGGACGGTGGTGACGGCGCATTTCTTCCAGAAGCATTG
GCCGGGTCTTCAATGCGGGGGCTCCAATTTCGGCGTCTTGCCCCACCTAC
CCGTGGTTCCAACGGCCTGCGTGGCCTTTGCCTTGTCCTTGAACATCGTC
GGGAACTGGGCGGGTGTCATGCCCGTGTgctagATGATGGTATCAAGCCG
cgtcgacgaagaggagcgcTTGCTACCATCGGTGGTTGCTGTAGGACTCA
TGTCTACGCCACATacggtggaggacaaggaggaggatgacgtgCCTGTC
GAGGTCCGGGAGCATGTAGGCGAGCTCGGTCGGCATTACAGAGCGCTGAG
CAAACGCCACGTCTCATGTTTAAGCTTGCTGGCTGCGGCCCTCATATTTT
TGGAAAATGACGACGTGAGTTTGCTCCTGAAGAAAGCCTGCCTTGCCCTT
TTTATCAGCTCATACGCCGACTACTTCATCAAGCCCTCGCCCCTTTTGGA
CGACGTGACGGTACGCCTGCACGTGGACGACCTTATACGGCCTGTCTCTG
ACAAGCTCGTCTGGTCATCTTGCGTGTACGGTATCGCTGGCGTTTATTCC
CTGTATTTGGGACAATACGCCTTCGGGACCTTGCAAATCGTCACATGCGC
CGGATCCAGCCTCTATCATATTCGGAAGGAGGCTGTCTTTTTTAACTTTG
ACAACACctttgcctcttcccttctcttcctcacccTGTATGCGGGGTGT
ATGGCGATCCATGTGCAGGACTGGACCCACTGCTTCGCCACCGTGGTCGG
TCTCCCGATAGCCGTCTTTTTGATCGTCTTCTGTGGCATGCCCGCCTCTC
TGGCCCGGGAGCATAGACACGGCCCCGGGTTCCGGCAGTGCGCGGGCCGC
CAGTACGATGATTGGCACACGGCCTGGCACTTTGTCTCCGGGGCAGGGAC
GGTGGTGACGGCGCATTTCTTCCAGAAGCATTGGCCGGGTCTTCAATGCG
GGGGCTCCAATTTCGGCGTCTTGCCCCACCTACCCGTGGTTCCAACGGCC
TGCGTGGCCTTTGCCTTGTCCTTGAACATCGTCGGGAACTGGGCGGGTGT
CATGCCCGTGTgctag back to top
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