EWM24045.1, cds6631 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24045.1 vs. NCBI_GenBank
Match: gi|585105336|gb|EWM24045.1| (hypothetical protein Naga_100280g9 [Nannochloropsis gaditana]) HSP 1 Score: 637.491 bits (1643), Expect = 0.000e+0 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
Query: 1 MMVSSRVDEEERLLPSVVAVGLMSTPHTVEDKEEDDVPVEVREHVGELGRHYRALSKRHVSCLSLLAAALIFLENDDVSLLLKKACLALFISSYADYFIKPSPLLDDVTVRLHVDDLIRPVSDKLVWSSCVYGIAGVYSLYLGQYAFGTLQIVTCAGSSLYHIRKEAVFFNFDNTFASSLLFLTLYAGCMAIHVQDWTHCFATVVGLPIAVFLIVFCGMPASLAREHRHGPGFRQCAGRQYDDWHTAWHFVSGAGTVVTAHFFQKHWPGLQCGGSNFGVLPHLPVVPTACVAFALSLNIVGNWAGVMPVC 310
MMVSSRVDEEERLLPSVVAVGLMSTPHTVEDKEEDDVPVEVREHVGELGRHYRALSKRHVSCLSLLAAALIFLENDDVSLLLKKACLALFISSYADYFIKPSPLLDDVTVRLHVDDLIRPVSDKLVWSSCVYGIAGVYSLYLGQYAFGTLQIVTCAGSSLYHIRKEAVFFNFDNTFASSLLFLTLYAGCMAIHVQDWTHCFATVVGLPIAVFLIVFCGMPASLAREHRHGPGFRQCAGRQYDDWHTAWHFVSGAGTVVTAHFFQKHWPGLQCGGSNFGVLPHLPVVPTACVAFALSLNIVGNWAGVMPVC
Sbjct: 1 MMVSSRVDEEERLLPSVVAVGLMSTPHTVEDKEEDDVPVEVREHVGELGRHYRALSKRHVSCLSLLAAALIFLENDDVSLLLKKACLALFISSYADYFIKPSPLLDDVTVRLHVDDLIRPVSDKLVWSSCVYGIAGVYSLYLGQYAFGTLQIVTCAGSSLYHIRKEAVFFNFDNTFASSLLFLTLYAGCMAIHVQDWTHCFATVVGLPIAVFLIVFCGMPASLAREHRHGPGFRQCAGRQYDDWHTAWHFVSGAGTVVTAHFFQKHWPGLQCGGSNFGVLPHLPVVPTACVAFALSLNIVGNWAGVMPVC 310
BLAST of EWM24045.1 vs. NCBI_GenBank
Match: gi|553185615|ref|XP_005854277.1| (hypothetical protein NGA_0208300 [Nannochloropsis gaditana CCMP526] >gi|422294782|gb|EKU22082.1| hypothetical protein NGA_0208300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0 Identity = 309/310 (99.68%), Postives = 309/310 (99.68%), Query Frame = 0
Query: 1 MMVSSRVDEEERLLPSVVAVGLMSTPHTVEDKEEDDVPVEVREHVGELGRHYRALSKRHVSCLSLLAAALIFLENDDVSLLLKKACLALFISSYADYFIKPSPLLDDVTVRLHVDDLIRPVSDKLVWSSCVYGIAGVYSLYLGQYAFGTLQIVTCAGSSLYHIRKEAVFFNFDNTFASSLLFLTLYAGCMAIHVQDWTHCFATVVGLPIAVFLIVFCGMPASLAREHRHGPGFRQCAGRQYDDWHTAWHFVSGAGTVVTAHFFQKHWPGLQCGGSNFGVLPHLPVVPTACVAFALSLNIVGNWAGVMPVC 310
MMVSSRVDEEERLLPSVVAVGLMSTPHTVEDKEEDDVPVEVREHVGELGRHYRALSKRHVSCLSLLAAALIFLENDDVSLLLKKACLALFISSYADYFIKPSPLLDDVTVRLHVDDLIRPVSDKLVWSSCVYGIAGVYSLYLGQYAFGTLQIVTCAGSSLYHIRKEAVFFNFDNTFASSLLFLTLYAGCMAIHVQDWTHCFATVVGLPIAVFLIVFCGMPASLAREHRHGPGFRQCAGRQYDDWHTAWHFVSGAGTVVTAHFFQKHWPGLQCGGSNFGVLPHLPVVPTACVA ALSLNIVGNWAGVMPVC
Sbjct: 1 MMVSSRVDEEERLLPSVVAVGLMSTPHTVEDKEEDDVPVEVREHVGELGRHYRALSKRHVSCLSLLAAALIFLENDDVSLLLKKACLALFISSYADYFIKPSPLLDDVTVRLHVDDLIRPVSDKLVWSSCVYGIAGVYSLYLGQYAFGTLQIVTCAGSSLYHIRKEAVFFNFDNTFASSLLFLTLYAGCMAIHVQDWTHCFATVVGLPIAVFLIVFCGMPASLAREHRHGPGFRQCAGRQYDDWHTAWHFVSGAGTVVTAHFFQKHWPGLQCGGSNFGVLPHLPVVPTACVALALSLNIVGNWAGVMPVC 310
BLAST of EWM24045.1 vs. NCBI_GenBank
Match: gi|298712987|emb|CBJ26889.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 160.614 bits (405), Expect = 8.670e-43 Identity = 82/198 (41.41%), Postives = 117/198 (59.09%), Query Frame = 0
Query: 112 LHVDDLIRPVSDKLVWSSCVYGIAGVYSLYLGQYAFGTLQIVTCAGSSLYHIRKEAVFFNFDNTFASSLLFLTLYAGCMAIHVQDWTHCFATVVGLPIAVFLIVFCGMPASLAREHRHGPGFRQCAGRQYDDWHTAWHFVSGAGTVVTAHFFQKHWPGLQCGGSNFGVLPHLPVVPTACVAFALSLNIVGNWAGVMPV 309
L D RP++D LVW+S VY + VY LY QY LQ++T GS+L+H+ +E FFN DN FA+SLL T ++ + + W + +G P A+F IV CGMP + R H G G + + +YD +H WH SG GT++T HFF+ ++P + GG F P +PVVPT +A + +N+ GN GVMP+
Sbjct: 180 LETGDKRRPLTDMLVWTSFVYCLPSVYGLYAHQYGIAGLQLMTTIGSTLFHLTRETKFFNLDNVFATSLLSTTAWSLYLGVTHGVWWYVVVIGLGGPFAIFCIVRCGMPGLVCR-HPAGSGLCRRSNPEYDFFHMLWHLSSGLGTLITIHFFEVYFPAEEAGGGWFYFFPDVPVVPTVALALSALINLYGNRVGVMPL 376
BLAST of EWM24045.1 vs. NCBI_GenBank
Match: gi|698823189|ref|XP_009844623.1| (hypothetical protein H257_17508 [Aphanomyces astaci] >gi|574100287|gb|ETV65870.1| hypothetical protein H257_17508 [Aphanomyces astaci]) HSP 1 Score: 73.1738 bits (178), Expect = 4.740e-12 Identity = 48/158 (30.38%), Postives = 70/158 (44.30%), Query Frame = 0
Query: 112 LHVDDLIRPVSDKLVWSSCVYGIAGVYSLYLGQYAFGTLQIVTCAGSSLYHIRKEAVFFNFDNTFASSLLFLTLYAGCMAIHVQDWTHCFATVVGLPIA-VFLIVFCGMPASLAREHRHGPGFRQCAGRQYDDWHTAWHFVSGAGTVVTAHFFQKHWP 268
L + + R D L+ ++ VY A V S LGQY LQ+ SS++H +E + D + +L + LY A H+ D H GL +A F ++CGMP QY+ WH WHF SG+ T+VT+ + P
Sbjct: 14 LRLSHIKREWHDPLILTNLVYVAASVISFALGQYTCAVLQLGASVASSMFHRHRETKYLPLDACISGNLGLIALYLSYHA-HLNDLHHVLGIKFGLGLACAFTFIYCGMPGD----------------AQYELWHRHWHFASGSTTLVTSVLLSLYIP 154
BLAST of EWM24045.1 vs. NCBI_GenBank
Match: gi|301096587|ref|XP_002897390.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262107081|gb|EEY65133.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 73.1738 bits (178), Expect = 8.619e-12 Identity = 44/151 (29.14%), Postives = 70/151 (46.36%), Query Frame = 0
Query: 119 RPVSDKLVWSSCVYGIAGVYSLYLGQYAFGTLQIVTCAGSSLYHIRKEAVFFNFDNTFASSLLFLTLYAGCMAIHVQDWTHCFATVVGLPI-AVFLIVFCGMPASLAREHRHGPGFRQCAGRQYDDWHTAWHFVSGAGTVVTAHFFQKHWP 268
R D+L++S+ VY +A + S Q G LQ+ S+++H KE + D + +L + ++AG + +W A + L + VF ++CGMP G +YD WH WH+VSGA T+ T F + P
Sbjct: 46 RAWCDRLIYSNLVYALAALISFSCDQNICGVLQMGAAIASTMFHRSKETKYLLLDALISGTLGIIFIFAGQHTFN-NEWYGILAIKLVLAVLCVFTWLYCGMPG----------------GERYDKWHNRWHYVSGATTISTTLFLTMYLP 179
BLAST of EWM24045.1 vs. NCBI_GenBank
Match: gi|675202677|ref|XP_008910223.1| (hypothetical protein PPTG_14991 [Phytophthora parasitica INRA-310] >gi|566017022|gb|ETI39933.1| hypothetical protein F443_14545 [Phytophthora parasitica P1569] >gi|567954375|gb|ETK80012.1| hypothetical protein L915_14187 [Phytophthora parasitica] >gi|567983031|gb|ETL33433.1| hypothetical protein L916_14086 [Phytophthora parasitica] >gi|568012542|gb|ETL86720.1| hypothetical protein L917_13873 [Phytophthora parasitica] >gi|568042579|gb|ETM39904.1| hypothetical protein L914_13992 [Phytophthora parasitica] >gi|568089454|gb|ETN04296.1| hypothetical protein PPTG_14991 [Phytophthora parasitica INRA-310] >gi|570320677|gb|ETO68625.1| hypothetical protein F444_14555 [Phytophthora parasitica P1976] >gi|570944506|gb|ETP09763.1| hypothetical protein F441_14417 [Phytophthora parasitica CJ01A1] >gi|570975868|gb|ETP37785.1| hypothetical protein F442_14381 [Phytophthora parasitica P10297] >gi|970662874|gb|KUG00192.1| hypothetical protein AM587_10016680 [Phytophthora nicotianae]) HSP 1 Score: 73.1738 bits (178), Expect = 8.706e-12 Identity = 44/151 (29.14%), Postives = 71/151 (47.02%), Query Frame = 0
Query: 119 RPVSDKLVWSSCVYGIAGVYSLYLGQYAFGTLQIVTCAGSSLYHIRKEAVFFNFDNTFASSLLFLTLYAGCMAIHVQDWTHCFATVVGLPI-AVFLIVFCGMPASLAREHRHGPGFRQCAGRQYDDWHTAWHFVSGAGTVVTAHFFQKHWP 268
R D L++S+ VY +A + S Q G LQ+ S+++H KE + D + +L + ++AG ++ ++W A + L + VF ++CGMP G +YD WH WH+VSGA T+ T F + P
Sbjct: 46 RAWCDSLIYSNLVYALAALISFSCDQNFCGVLQMGAAIASTMFHRSKETKYLLLDALISGTLGIIFIFAGQHTLN-KEWYGILAIKLVLAVLCVFTWLYCGMPG----------------GERYDKWHNRWHYVSGATTISTTLFLTMYMP 179
BLAST of EWM24045.1 vs. NCBI_GenBank
Match: gi|695389596|ref|XP_009519480.1| (hypothetical protein PHYSODRAFT_482862 [Phytophthora sojae] >gi|348684377|gb|EGZ24192.1| hypothetical protein PHYSODRAFT_482862 [Phytophthora sojae]) HSP 1 Score: 72.4034 bits (176), Expect = 1.906e-11 Identity = 45/152 (29.61%), Postives = 72/152 (47.37%), Query Frame = 0
Query: 119 RPVSDKLVWSSCVYGIAGVYSLYLGQYAFGTLQIVTCAGSSLYHIRKEAVFFNFDNTFASSLLFLTLYAGCMAIHVQDWTHCFA--TVVGLPIAVFLIVFCGMPASLAREHRHGPGFRQCAGRQYDDWHTAWHFVSGAGTVVTAHFFQKHWP 268
R D L++S+ VY +A + S Q G LQ+ S+++H KE + D + +L + ++AG + +W A T++GL + +F ++CGMP G +YD WH WH+VSGA T+ T F + P
Sbjct: 47 RAWCDSLIYSNLVYALAALISFSCDQNFCGVLQMGAAVASTMFHRSKETKYLLLDALISGTLGVIFIFAGQHTL-TNEWYGILAIKTLLGL-LCIFTWLYCGMPG----------------GERYDKWHKRWHYVSGATTISTTLFLTMYLP 180
BLAST of EWM24045.1 vs. NCBI_GenBank
Match: gi|1214696192|gb|OWZ09776.1| (hypothetical protein PHMEG_00017467 [Phytophthora megakarya]) HSP 1 Score: 70.8626 bits (172), Expect = 6.039e-11 Identity = 44/151 (29.14%), Postives = 68/151 (45.03%), Query Frame = 0
Query: 119 RPVSDKLVWSSCVYGIAGVYSLYLGQYAFGTLQIVTCAGSSLYHIRKEAVFFNFDNTFASSLLFLTLYAGCMAIHVQDWTHCFATVVGLPI-AVFLIVFCGMPASLAREHRHGPGFRQCAGRQYDDWHTAWHFVSGAGTVVTAHFFQKHWP 268
R D L++S+ VY +A + S Q G +Q+ S+++H KE + D + SL + ++AG + +W A V L + F ++CGMP G +YD WH WH+VSGA T+ T F + P
Sbjct: 45 RAWCDSLIYSNLVYALAALISFSCDQNFCGVMQMGAAIASTMFHRSKETKYLLLDALISGSLGLVFIFAGQHTL-TNEWYGILAVKVLLGVLCTFTWLYCGMPG----------------GERYDKWHKRWHYVSGATTISTTLFLTMYMP 178
BLAST of EWM24045.1 vs. NCBI_GenBank
Match: gi|673047303|ref|XP_008877612.1| (hypothetical protein H310_12366 [Aphanomyces invadans] >gi|574466776|gb|ETV93803.1| hypothetical protein H310_12366 [Aphanomyces invadans]) HSP 1 Score: 67.0106 bits (162), Expect = 8.322e-10 Identity = 43/150 (28.67%), Postives = 68/150 (45.33%), Query Frame = 0
Query: 112 LHVDDLIRPVSDKLVWSSCVYGIAGVYSLYLGQYAFGTLQIVTCAGSSLYHIRKEAVFFNFDNTFASSLLFLTLYAGCMAIHVQDWTHCFATVVGLPIA-VFLIVFCGMPASLAREHRHGPGFRQCAGRQYDDWHTAWHFVSGAGTVVTA 260
L + + R D L+ ++ +Y A + S LGQY LQ+ S+++H +E + D + +L + LY A H+ D H L +A F ++CGMP + QY+ WH WHF SG+ T+VT+
Sbjct: 14 LRLSHIKREWHDPLILTNLIYVAASLVSFALGQYTCAMLQLGASIASTMFHRHRETKYLPLDACISGNLGVIALYLAYHA-HLNDLHHVLGIKFTLGLACAFTFIYCGMPGDV----------------QYELWHRHWHFASGSTTLVTS 146 The following BLAST results are available for this feature:
BLAST of EWM24045.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 9
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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