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Properties
| Property Name | Value |
|---|
| Product | nudix hydrolase 1 |
| Orig transcript id | gnl|cribi|Naga_100063g25.3883.mrna |
| Orig protein id | gnl|cribi|Naga_100063g25.3883 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:141205..141982 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6637 ID=rna6637|Name=rna6637|organism=Nannochloropsis gaditana|type=mRNA|length=2344bp
AAATCCCCACATGGTTTAAAGCCCCCCGAAATACAAGCGTCAATATCCTT
CAAAACGGATATCAATTGTTCAGATCATCCAGCAATTTCTAATACTGCAA
TGGGCGTAGGGATTGTCTCTGGAACCGTGCCCTTCCCCTGCCTCATGTCA
GGCGAGCCCCAGCACTTATGAAGTGCAGGGCCCACCTGACCAGTTGGCAC
ATTCACATACAGATGTATTAGATGCGGCATGTCATTATGTTTGCGTGAAA
CTTACGCTGTTCTCATCTCTTTTCAACACGTGCCTTATTTGGACCGGGGG
GGAGAAAAAGGAAAGTGAGCAGGCTTTGAAGTTGCCCTGCACATGGGTAA
ATTCACTGAAATGATTCAATTTTCCAGACCTTTCGCACAGCGCACAGGTA
CTTGACCATCTAGTACATTTGCCATGAGTCACCTCTTTGATGTTCGAGCC
CGCCACCGCCTCCTTCCACCCCGTCAACTCCTCCTAGCCGCGGTCTCCGC
GCTTTTCTTCTCCACATGCGCGATAGCAGTTGACCGCTCCAAAGGCCACT
CTTCATTTTCGGACCTTCCTTCATCAAGCTACTCGTCCGTGCTGGTCCCA
AAAGCAGAAAGCTCCTTGCACTGTCATTCCTCCGCCTTCGCTTTTCCGTC
TCCCACCCACCCGTCTACCTCTTCTTCCCGACAAGATTGGATAAAACGGC
AGCCTTTTTCACCTTCCTCCACCTTTTCAAGAGGCGGCGCGCCTGCTAAA
GGACGCGACTGTCGGAATGCACGGCCCATCAAGACGATAGGGCCGGGAGT
GCTCCTGCCCCTCTTCCTCTTCCTCCACTCCTCCCAGGCCTCCCCCTTCG
ACCCCCACCCCCTCCCACTTATGTTGAGCCTTTGTTTTTTCAATGGTTGG
TACATCCGGGTCACCGACCACGAGAAACAGGTGGCGTTCGCCGCCATCGT
GGGATCGTTCAAGCATCCCGGGGCCACTAATTATACGGAGCATTACGTAG
GATTGGTCTACGCGGACCGGTCCGGGAAGATGCAGACGGCGCACGCCTTT
CCCCCGCCCGACAGTGTGACGATTGAACGGGGAAGCGAGGGTTTTGACGG
CGTTCCCAGTAACTTCACGTGGAAGGCCAAGGGGGTAGGACGCTTGCATG
TTGGAAAGGACGAGGGCCTGCTGGACATTGACCTGCCGGGAATGCGGGCC
ACAGCGCACTTTCACGACCGAGTGCCTTGGAACGCGGAAAGGCCAGACAC
GGACGGACCAGAGGTGGGCACGGGGAGAGGGCAGTGGGAGAGAGGGGGGC
AGGGAGGGAAGGAGGGAGGGAGGGAGGGTGAAGGGAGGGGCAGTGTCCTC
TCCTCTTTCGCATGCTGTGTTCATTCTTGACGCTCGGTCTTCTCACGATG
GCCATTCGCCCTTTCTCCCCACCCACCATGTCTTACTTCCGGGTATCCAG
GGATGGTTGGGTCGGACCCCTCTGCTCCCGTGCCGGTACTTTGTCCACTC
CCTCGCCTCTCGCACCACCTACAGCCTCCGCCTCCGGCCCCGGCCTCCCT
CCCTCGCTCCCTCCACGCGTCCCCCCACCCATCTCGCCGGACAGGGCTAC
GCGCACATGGAAAGCAACCACGGGAACTGTTTCCCCTCAGCTTGGATTTG
GTGCAATGCCATCGGCCCCGACCGGGCCGTCTCCCTGCTTATGGTGGGGG
GAAAATTCGAAATCGGCCCCTCGGCGCCCACCACTTGGATCCTCACACTC
CGCTCTCCCCGCTTCAATTGGGTCTTTCGGACCACGGACCTCGACGAGGT
GAACGCGCACTTGCAGTACACGACCGGCACGCTCCAGGTCCAGGCTCGCT
CCCGCTGTGGGCGACGCCGGCTGACCGTGAGTCTCTGCGCCCCCGTCGGA
TCCTTCGGAGCGCCCATTTACGTCCCCACAGCCCAAGGCTTCTCCTGTCA
GCCGGGGTGCCGGGAATCGTTCACAGGGAAGGCGATCATCCGTGCCGTGG
ACGAGGGGGAGGGCGGGGGGGGGCGTATAGTCAGGGAGGAGACCCATGAG
GTGCCCTTGGCGGCCTTGGAGCTCGGGGGGGAGATGCAACGATTGTGAAG
GAGGGATGTACAGCGCGGTGGTTGTTTTACGTGGTGGCTGAGAGGGGGGG
GTAGAGGGTGGGCTGGCCAGCGGGCTCACACCCGAGGGCTTTGGGAAAAC
GTCCACAAAAGAAGGTGAAGGAACGTACAGGGGGGAGGAAGTAGGGATGA
TGGAGAGCTGTCCAGGAAGACCCACTCATTTGAAAGACGCAAGGAATGAG
CATTGCTGTTGATCGAGAGAGGAGGGAAGGAAGGAGAAGGGCCC back to topprotein sequence of rna6637 >rna6637-protein ID=rna6637-protein|Name=rna6637|organism=Nannochloropsis gaditana|type=polypeptide|length=183bp
MADHTGVEINNAGSQPIIDAHAHVRVGVGVVVQSTGHQGLVLVGRRKGSH
GSGSLALPGGHLESGETIANCAVREIKEECNLDLDATSVRLVGVTQDVFP
EPARKHYVTLIVIAAVLPRSPPLQNMEPEKCVAWEWLSLEGLKERKTECF
LPLQHALDTFLLRPGLLEDGLENGLRLNDCLQR back to topmRNA from alignment at CM002469.1:141205..141982+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6637 ID=rna6637|Name=rna6637|organism=Nannochloropsis gaditana|type=mRNA|length=778bp|location=Sequence derived from alignment at CM002469.1:141205..141982+ (Nannochloropsis gaditana)
AAGGGACTGTTAATAACTCCATACACAGGACAATTAAACTGTTCAATGCT
GAGAGATGGCTGACCATACTGGCGTGGAGATAAACAACGCAGGAAGTCAG
GTGGGACTAGAGAGAGGGAACGACATCAAtttccaacctccctccaccct
ccgggGTTCTTAAAAACCACTCACACACCACCGCCTGCCATCCTAGCCCA
TCATTGACGCCCATGCTCATGTGCGAGTAGGGGTTGGCGTTGTAGTCCAG
TCTACAGGTCACCAAGGCCTTGTTCTGGTTGGACGCCGGAAGGGATCACA
TGGCAGCGgctcccttgctcttccaGGAGGGCATCTGGAATCAGGGGAAA
CCATTGCAAATTGCGCCGTGAGAGAAATAAAGGAAGAGTGCAACCTCGAT
TTGGATGCAACAAGCGTGCGTTTGGTGGGCGTAACCCAAGATGTCTTCCC
AGAGCCCGCCAGAAAGCACTACGTTACGCTTATAGTAATTgcggccgtcc
tccctcgctctccgccACTCCAAAATATGGAACCAGAAAAATGCGTGGCG
TGGGAATGGCTATCCCTCGAAGGTttgaaagagaggaaaacaGAATGCTT
CCTTCCTTTACAGCACGCGCTGGACACGTTCTTACTGCGGCCTGGCCTCT
TGGAGGATGGCTTGGAGAACGGGCTCCGACTGAATGACTGTTTGCAAAGA
TAGAGCTAGCGCAATAATATCACCTCGCTTAAAGTGTTTAGCATTCTGAT
TAAATTATCAagcatcctttccttttaT back to topCoding sequence (CDS) from alignment at CM002469.1:141205..141982+ >rna6637 ID=rna6637|Name=rna6637|organism=Nannochloropsis gaditana|type=CDS|length=1104bp|location=Sequence derived from alignment at CM002469.1:141205..141982+ (Nannochloropsis gaditana)
ATGGCTGACCATACTGGCGTGGAGATAAACAACGCAGGAAGTCAGCCCAT
CATTGACGCCCATGCTCATGTGCGAGTAGGGGTTGGCGTTGTAGTCCAGT
CTACAGGTCACCAAGGCCTTGTTCTGGTTGGACGCCGGAAGGGATCACAT
GGCAGCGgctcccttgctcttccaGGAGGGCATCTGGAATCAGGGGAAAC
CATTGCAAATTGCGCCGTGAGAGAAATAAAGGAAGAGTGCAACCTCGATT
TGGATGCAACAAGCGTGCGTTTGGTGGGCGTAACCCAAGATGTCTTCCCA
GAGCCCGCCAGAAAGCACTACGTTACGCTTATAGTAATTgcggccgtcct
ccctcgctctccgccACTCCAAAATATGGAACCAGAAAAATGCGTGGCGT
GGGAATGGCTATCCCTCGAAGGTttgaaagagaggaaaacaGAATGCTTC
CTTCCTTTACAGCACGCGCTGGACACGTTCTTACTGCGGCCTGGCCTCTT
GGAGGATGGCTTGGAGAACGGGCTCCGACTGAATGACTGTTTGCAAAGAT
AGATGGCTGACCATACTGGCGTGGAGATAAACAACGCAGGAAGTCAGCCC
ATCATTGACGCCCATGCTCATGTGCGAGTAGGGGTTGGCGTTGTAGTCCA
GTCTACAGGTCACCAAGGCCTTGTTCTGGTTGGACGCCGGAAGGGATCAC
ATGGCAGCGgctcccttgctcttccaGGAGGGCATCTGGAATCAGGGGAA
ACCATTGCAAATTGCGCCGTGAGAGAAATAAAGGAAGAGTGCAACCTCGA
TTTGGATGCAACAAGCGTGCGTTTGGTGGGCGTAACCCAAGATGTCTTCC
CAGAGCCCGCCAGAAAGCACTACGTTACGCTTATAGTAATTgcggccgtc
ctccctcgctctccgccACTCCAAAATATGGAACCAGAAAAATGCGTGGC
GTGGGAATGGCTATCCCTCGAAGGTttgaaagagaggaaaacaGAATGCT
TCCTTCCTTTACAGCACGCGCTGGACACGTTCTTACTGCGGCCTGGCCTC
TTGGAGGATGGCTTGGAGAACGGGCTCCGACTGAATGACTGTTTGCAAAG
ATAG back to top
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