EWM24058.1, cds6621 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24058.1 vs. NCBI_GenBank
Match: gi|585105350|gb|EWM24058.1| (nudix hydrolase 1 [Nannochloropsis gaditana]) HSP 1 Score: 372.089 bits (954), Expect = 2.022e-130 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0 Query: 1 MADHTGVEINNAGSQPIIDAHAHVRVGVGVVVQSTGHQGLVLVGRRKGSHGSGSLALPGGHLESGETIANCAVREIKEECNLDLDATSVRLVGVTQDVFPEPARKHYVTLIVIAAVLPRSPPLQNMEPEKCVAWEWLSLEGLKERKTECFLPLQHALDTFLLRPGLLEDGLENGLRLNDCLQR 183 MADHTGVEINNAGSQPIIDAHAHVRVGVGVVVQSTGHQGLVLVGRRKGSHGSGSLALPGGHLESGETIANCAVREIKEECNLDLDATSVRLVGVTQDVFPEPARKHYVTLIVIAAVLPRSPPLQNMEPEKCVAWEWLSLEGLKERKTECFLPLQHALDTFLLRPGLLEDGLENGLRLNDCLQR Sbjct: 1 MADHTGVEINNAGSQPIIDAHAHVRVGVGVVVQSTGHQGLVLVGRRKGSHGSGSLALPGGHLESGETIANCAVREIKEECNLDLDATSVRLVGVTQDVFPEPARKHYVTLIVIAAVLPRSPPLQNMEPEKCVAWEWLSLEGLKERKTECFLPLQHALDTFLLRPGLLEDGLENGLRLNDCLQR 183
BLAST of EWM24058.1 vs. NCBI_GenBank
Match: gi|553187219|ref|XP_005854567.1| (hypothetical protein NGA_2108100 [Nannochloropsis gaditana CCMP526] >gi|422294493|gb|EKU21793.1| hypothetical protein NGA_2108100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 122.479 bits (306), Expect = 1.736e-33 Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0 Query: 126 MEPEKCVAWEWLSLEGLKERKTECFLPLQHALDTFLLRPGLLEDGLENGLRLNDCLQR 183 MEPEKCVAWEWLSLEGLKERKTECFLPLQHALDTFLLRPGLLEDGLENGLRLNDCLQR Sbjct: 1 MEPEKCVAWEWLSLEGLKERKTECFLPLQHALDTFLLRPGLLEDGLENGLRLNDCLQR 58
BLAST of EWM24058.1 vs. NCBI_GenBank
Match: gi|342320478|gb|EGU12418.1| (putative NUDIX domain [Rhodotorula toruloides ATCC 204091]) HSP 1 Score: 117.472 bits (293), Expect = 2.433e-30 Identity = 68/146 (46.58%), Postives = 91/146 (62.33%), Query Frame = 0 Query: 23 HVRVGVGVVVQSTGHQGLVLVGRRKGSHGSGSLALPGGHLESGETIANCAVREIKEECNLDLDATSVRLVGVTQDVFPEPARKHYVTLIVIAAVLPRSPPLQNMEPEKCVAWEWLSLEGLKERKTE----CFLPLQHALDTFLLRP 164 HV+VGVG + ++ +G +VG RKGSHG+G L LPGGHL+ GET CAVRE+ EE L + VR + T D+F E +KHY+T+ V+ V + P Q +EPEKC WEW + E LKE ++ FLPL+ + FL RP Sbjct: 4 HVKVGVGCFLLNS--RGEFVVGVRKGSHGAGCLQLPGGHLDFGETPEACAVREVAEETGLAVREADVRFLTATNDIF-EADKKHYITMFVVCRVADDADP-QVLEPEKCERWEWHTWEQLKELVSDPSNRLFLPLR---NLFLQRP 142
BLAST of EWM24058.1 vs. NCBI_GenBank
Match: gi|477532934|gb|ENH84528.1| (nudix domain protein [Colletotrichum orbiculare MAFF 240422]) HSP 1 Score: 116.701 bits (291), Expect = 4.304e-30 Identity = 69/150 (46.00%), Postives = 90/150 (60.00%), Query Frame = 0 Query: 14 SQPIIDAHAHVRVGVGVVVQSTGHQGLVLVGRRKGSHGSGSLALPGGHLESGETIANCAVREIKEECNLDLDATSVRLVGVTQDVFPEPARKHYVTLIVIAAVLPRSPPLQNMEPEKCVAWEWLSLE-----GLKERKTECFLPLQHALD 158 S P D AH RVGV V+ +G VLVG RKGSHGSG+L LPGGHLE GE+ C RE EE NL + V+++GVT D+F R HYVT+ V VL + P + +EP KC W+W + + G +E + E F+PL+H L+ Sbjct: 2 SVPASDPFAHPRVGVAAVIS---RRGKVLVGLRKGSHGSGTLQLPGGHLEFGESFETCVEREALEETNLKVKG--VKVLGVTNDIFDAEGR-HYVTVFVGCEVLDDAEP-EVLEPTKCSWWQWKTWDEIRAFGTREGEAELFIPLRHFLE 144
BLAST of EWM24058.1 vs. NCBI_GenBank
Match: gi|673041909|ref|XP_008874915.1| (hypothetical protein, variant 1 [Aphanomyces invadans] >gi|574469637|gb|ETV96651.1| hypothetical protein, variant 1 [Aphanomyces invadans]) HSP 1 Score: 120.553 bits (301), Expect = 9.693e-30 Identity = 63/142 (44.37%), Postives = 83/142 (58.45%), Query Frame = 0 Query: 25 RVGVGVVVQSTGHQGLVLVGRRKGSHGSGSLALPGGHLESGETIANCAVREIKEECNLDLDATSVRLVGVTQDVFPEPARKHYVTLIVIAAVLPRSPPLQNMEPEKCVAWEWLSLEGLKE--RKTECFLPLQHALDTFLLRP 164 RVGVGV++ S + VL+G RK SHG+G + LPGGHLE GE+ CA+RE+KEE LD+ V +T D P+ KHY+T+ + A V P Q MEP+KC WEWL E LK + F+PL H + + P Sbjct: 188 RVGVGVLLYSAAYPACVLIGVRKASHGAGKVQLPGGHLEFGESWEECAIREVKEETALDI--VDVTFAHLTNDYMPD-DDKHYITIFMQATVQGNQVP-QCMEPDKCEGWEWLPYETLKSPAYQARLFMPLHHLTQSLFVPP 325
BLAST of EWM24058.1 vs. NCBI_GenBank
Match: gi|635368988|emb|CCI42891.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 118.627 bits (296), Expect = 1.151e-29 Identity = 62/137 (45.26%), Postives = 86/137 (62.77%), Query Frame = 0 Query: 21 HAHVRVGVGVVVQSTGHQGLVLVGRRKGSHGSGSLALPGGHLESGETIANCAVREIKEECNLDLDATSVRLVGVTQDVFPEPARKHYVTLIVIAAVLPRSPPLQNMEPEKCVAWEWLSLEGLKERKTECFLPLQHAL 157 +A VRVGV +++ S H G VL+GRR GSHG G LALPGGHLE E+ CA+RE+KEE ++ L+ + VT D EP +HYVT+ + A++ S ++NMEP KC +W W S L++ + F PL H + Sbjct: 108 NACVRVGVAILLTSPQHSGCVLIGRRLGSHGEGKLALPGGHLEMYESWEECAIREVKEETDVTLER--AEFLFVTNDSM-EPEGRHYVTIFMHASINCDSQAIRNMEPHKCESWYWESWSKLEDSEN-LFTPLYHLI 240
BLAST of EWM24058.1 vs. NCBI_GenBank
Match: gi|635368986|emb|CCI42889.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 118.627 bits (296), Expect = 1.276e-29 Identity = 62/137 (45.26%), Postives = 86/137 (62.77%), Query Frame = 0 Query: 21 HAHVRVGVGVVVQSTGHQGLVLVGRRKGSHGSGSLALPGGHLESGETIANCAVREIKEECNLDLDATSVRLVGVTQDVFPEPARKHYVTLIVIAAVLPRSPPLQNMEPEKCVAWEWLSLEGLKERKTECFLPLQHAL 157 +A VRVGV +++ S H G VL+GRR GSHG G LALPGGHLE E+ CA+RE+KEE ++ L+ + VT D EP +HYVT+ + A++ S ++NMEP KC +W W S L++ + F PL H + Sbjct: 113 NACVRVGVAILLTSPQHSGCVLIGRRLGSHGEGKLALPGGHLEMYESWEECAIREVKEETDVTLE--RAEFLFVTNDSM-EPEGRHYVTIFMHASINCDSQAIRNMEPHKCESWYWESWSKLEDSEN-LFTPLYHLI 245
BLAST of EWM24058.1 vs. NCBI_GenBank
Match: gi|635368987|emb|CCI42890.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 119.013 bits (297), Expect = 3.154e-29 Identity = 62/135 (45.93%), Postives = 85/135 (62.96%), Query Frame = 0 Query: 21 HAHVRVGVGVVVQSTGHQGLVLVGRRKGSHGSGSLALPGGHLESGETIANCAVREIKEECNLDLDATSVRLVGVTQDVFPEPARKHYVTLIVIAAVLPRSPPLQNMEPEKCVAWEWLSLEGLKERKTECFLPLQH 155 +A VRVGV +++ S H G VL+GRR GSHG G LALPGGHLE E+ CA+RE+KEE ++ L+ + VT D EP +HYVT+ + A++ S ++NMEP KC +W W S L++ + F PL H Sbjct: 173 NACVRVGVAILLTSPQHSGCVLIGRRLGSHGEGKLALPGGHLEMYESWEECAIREVKEETDVTLE--RAEFLFVTNDSM-EPEGRHYVTIFMHASINCDSQAIRNMEPHKCESWYWESWSKLEDSEN-LFTPLYH 303
BLAST of EWM24058.1 vs. NCBI_GenBank
Match: gi|1183431613|gb|ORY55854.1| (ADP-ribose pyrophosphatase [Pseudomassariella vexata]) HSP 1 Score: 114.39 bits (285), Expect = 4.826e-29 Identity = 66/156 (42.31%), Postives = 93/156 (59.62%), Query Frame = 0 Query: 25 RVGVGVVVQSTGHQGLVLVGRRKGSHGSGSLALPGGHLESGETIANCAVREIKEECNLDLDATSVRLVGVTQDVFPEPARKHYVTLIVIAAVLPRSPPLQNMEPEKCVAWEWLSLEGLKER------------KTECFLPLQHALDTFLLRPGLLE 168 RVGV V++Q+T +G +++G+R+GSHGSG+ ALPGGHLE GET CA RE +EE LD+ A V+LV VT DVF E KHY+TL V + + +EPEKC W W S LK+ + FLP+++ + + PG+++ Sbjct: 9 RVGVAVIIQNT--EGEIVLGKRRGSHGSGTWALPGGHLEFGETYFACAERETREETGLDVKA--VKLVAVTNDVFQELG-KHYITLFVTCELKDLHAEPKILEPEKCEGWHWTSWADLKQWAEHHEIESSEWAENRLFLPMRNLIKEY---PGIVD 156
BLAST of EWM24058.1 vs. NCBI_GenBank
Match: gi|698800194|ref|XP_009833126.1| (hypothetical protein H257_08785 [Aphanomyces astaci] >gi|574111845|gb|ETV77339.1| hypothetical protein H257_08785 [Aphanomyces astaci]) HSP 1 Score: 118.242 bits (295), Expect = 9.661e-29 Identity = 63/133 (47.37%), Postives = 81/133 (60.90%), Query Frame = 0 Query: 25 RVGVGVVVQSTGHQGLVLVGRRKGSHGSGSLALPGGHLESGETIANCAVREIKEECNLDLDATSVRLVGVTQDVFPEPARKHYVTLIVIAAVLPRSPPLQNMEPEKCVAWEWLSLEGLKE--RKTECFLPLQH 155 RVGVGV++ S H VL+G RK SHG+G + LPGGHLE GE+ CAVRE+KEE DLD V T D+ P+ KHY+T+ + A V P++ MEP+KC WEW E LK + F+PL+H Sbjct: 194 RVGVGVLLYSAAHPSCVLIGVRKASHGAGKVQLPGGHLEFGESWEECAVREVKEET--DLDIGDVTFAHSTNDIMPDD-DKHYITIFMQATVRDGQVPVR-MEPDKCEGWEWQPWEHLKSPAFQARLFMPLRH 322 The following BLAST results are available for this feature:
BLAST of EWM24058.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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